RNA–Protein interactions for RNA: ENST00000622020.4

NPHP4-211, Transcript of nephrocystin 4, humanhuman

TSL 5 BASIC

Gene NPHP4, Length 3,004 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-211ENST00000622020 TMEM38BQ9NVV0 291 aa13.56□□□□□ -0.24
NPHP4-211ENST00000622020 TK1P04183 234 aa13.56□□□□□ -0.24
NPHP4-211ENST00000622020 SOD3P08294 240 aa13.56□□□□□ -0.24
NPHP4-211ENST00000622020 STARD6P59095 220 aa13.56□□□□□ -0.24
NPHP4-211ENST00000622020 SRYQ05066 204 aa13.56□□□□□ -0.24
NPHP4-211ENST00000622020 DAZAP2Q15038 168 aaPredicted RBP13.56□□□□□ -0.24
NPHP4-211ENST00000622020 DMRTC2Q8IXT2 367 aaPredicted RBP13.56□□□□□ -0.24
NPHP4-211ENST00000622020 ZNF610Q8N9Z0 462 aa13.56□□□□□ -0.24
NPHP4-211ENST00000622020 S100PBPQ96BU1 408 aa13.56□□□□□ -0.24
NPHP4-211ENST00000622020 FOXB1Q99853 325 aa13.56□□□□□ -0.24
NPHP4-211ENST00000622020 CALHM2Q9HA72 323 aa13.56□□□□□ -0.24
NPHP4-211ENST00000622020 DMRT1Q9Y5R6 373 aa13.56□□□□□ -0.24
NPHP4-211ENST00000622020 CACNA1DQ01668 2161 aa13.55□□□□□ -0.24
NPHP4-211ENST00000622020 A0A0G2JRQ6 117 aa13.55□□□□□ -0.24
NPHP4-211ENST00000622020 HMGB3O15347 200 aaKnown RBP13.55□□□□□ -0.24
NPHP4-211ENST00000622020 VAMP5O95183 116 aa13.55□□□□□ -0.24
NPHP4-211ENST00000622020 EDN3P14138 238 aa13.55□□□□□ -0.24
NPHP4-211ENST00000622020 FABP4P15090 132 aa13.55□□□□□ -0.24
NPHP4-211ENST00000622020 LMO1P25800 156 aa13.55□□□□□ -0.24
NPHP4-211ENST00000622020 PMELP40967 661 aa13.55□□□□□ -0.24
NPHP4-211ENST00000622020 DSCR4P56555 118 aaPredicted RBP13.55□□□□□ -0.24
NPHP4-211ENST00000622020 WIPI1Q5MNZ9 446 aaPredicted RBP13.55□□□□□ -0.24
NPHP4-211ENST00000622020 LYRM2Q9NU23 88 aaPredicted RBP13.55□□□□□ -0.24
NPHP4-211ENST00000622020 DNAJC13O75165 2243 aa13.55□□□□□ -0.24
NPHP4-211ENST00000622020 CXorf65A6NEN9 183 aa13.55□□□□□ -0.24
NPHP4-211ENST00000622020 IAPPP10997 89 aa13.55□□□□□ -0.24
NPHP4-211ENST00000622020 CCL4P13236 92 aa13.55□□□□□ -0.24
NPHP4-211ENST00000622020 ZNF16P17020 682 aaPredicted RBP13.55□□□□□ -0.24
NPHP4-211ENST00000622020 CDX1P47902 265 aaPredicted RBP13.55□□□□□ -0.24
NPHP4-211ENST00000622020 FUT6P51993 359 aa13.55□□□□□ -0.24
NPHP4-211ENST00000622020 HERPUD1Q15011 391 aa13.55□□□□□ -0.24
NPHP4-211ENST00000622020 ZNF880Q6PDB4 577 aa13.55□□□□□ -0.24
NPHP4-211ENST00000622020 RDH5Q92781 318 aa13.55□□□□□ -0.24
NPHP4-211ENST00000622020 YPEL4Q96NS1 127 aa13.55□□□□□ -0.24
NPHP4-211ENST00000622020 WNT5BQ9H1J7 359 aa13.55□□□□□ -0.24
NPHP4-211ENST00000622020 MMP9P14780 707 aa13.54□□□□□ -0.24
NPHP4-211ENST00000622020 COL19A1Q14993 1142 aa13.54□□□□□ -0.24
NPHP4-211ENST00000622020 OR2T2Q6IF00 324 aa13.54□□□□□ -0.24
NPHP4-211ENST00000622020 CPEB3Q8NE35 698 aaKnown RBP13.54□□□□□ -0.24
NPHP4-211ENST00000622020 OR56B2PQ8NGI1 322 aa13.54□□□□□ -0.24
NPHP4-211ENST00000622020 C10orf35Q96D05 121 aa13.54□□□□□ -0.24
NPHP4-211ENST00000622020 MEGF10Q96KG7 1140 aa13.54□□□□□ -0.24
NPHP4-211ENST00000622020 ZNF576Q9H609 170 aa13.54□□□□□ -0.24
NPHP4-211ENST00000622020 ZNF665Q9H7R5 613 aa13.54□□□□□ -0.24
NPHP4-211ENST00000622020 hCG_38984A0A1B0GV85 526 aa13.54□□□□□ -0.24
NPHP4-211ENST00000622020 PITX3O75364 302 aa13.54□□□□□ -0.24
NPHP4-211ENST00000622020 SSR4P51571 173 aa13.54□□□□□ -0.24
NPHP4-211ENST00000622020 UNQ6494/PRO21346Q6UXR6 183 aa13.54□□□□□ -0.24
NPHP4-211ENST00000622020 RPS19BP1Q86WX3 136 aaKnown RBP13.54□□□□□ -0.24
NPHP4-211ENST00000622020 MALSU1Q96EH3 234 aa13.54□□□□□ -0.24
NPHP4-211ENST00000622020 TVP23CQ96ET8 276 aa13.54□□□□□ -0.24
NPHP4-211ENST00000622020 SSX3Q99909 188 aa13.54□□□□□ -0.24
NPHP4-211ENST00000622020 OR2H1Q9GZK4 316 aa13.54□□□□□ -0.24
NPHP4-211ENST00000622020 SLC25A31Q9H0C2 315 aa13.54□□□□□ -0.24
NPHP4-211ENST00000622020 SLC22A20A6NK97 555 aa13.53□□□□□ -0.24
NPHP4-211ENST00000622020 HLA-BQ31612 363 aa13.53□□□□□ -0.24
NPHP4-211ENST00000622020 KIAA1456Q9P272 454 aa13.53□□□□□ -0.24
NPHP4-211ENST00000622020 CDS2O95674 445 aa13.53□□□□□ -0.24
NPHP4-211ENST00000622020 UMODP07911 640 aa13.53□□□□□ -0.24
NPHP4-211ENST00000622020 RAC1P63000 192 aa13.53□□□□□ -0.24
NPHP4-211ENST00000622020 NKX6-1P78426 367 aaPredicted RBP13.53□□□□□ -0.24
NPHP4-211ENST00000622020 NECAP1Q8NC96 275 aa13.53□□□□□ -0.24
NPHP4-211ENST00000622020 OR1K1Q8NGR3 316 aa13.53□□□□□ -0.24
NPHP4-211ENST00000622020 SLC34A2O95436 690 aa13.53□□□□□ -0.24
NPHP4-211ENST00000622020 MRPL14Q6P1L8 145 aaKnown RBP13.53□□□□□ -0.24
NPHP4-211ENST00000622020 C20orf204Q6ZNR8 217 aa13.53□□□□□ -0.24
NPHP4-211ENST00000622020 CLDND2Q8NHS1 167 aa13.53□□□□□ -0.24
NPHP4-211ENST00000622020 FRZBQ92765 325 aa13.53□□□□□ -0.24
NPHP4-211ENST00000622020 SIGLEC12Q96PQ1 595 aa13.53□□□□□ -0.24
NPHP4-211ENST00000622020 TREM2Q9NZC2 230 aa13.53□□□□□ -0.24
NPHP4-211ENST00000622020 IGKV1-6A0A0C4DH72 117 aa13.52□□□□□ -0.24
NPHP4-211ENST00000622020 ZNF816-ZNF321PA0A0X1KG74 233 aa13.52□□□□□ -0.24
NPHP4-211ENST00000622020 METTL15P1P0C7V9 234 aa13.52□□□□□ -0.24
NPHP4-211ENST00000622020 TRGC1P0CF51 173 aa13.52□□□□□ -0.24
NPHP4-211ENST00000622020 FOXG1P55316 489 aaPredicted RBP13.52□□□□□ -0.24
NPHP4-211ENST00000622020 TMEM211Q6ICI0 200 aa13.52□□□□□ -0.24
NPHP4-211ENST00000622020 FOXL2NBQ6ZUU3 175 aa13.52□□□□□ -0.24
NPHP4-211ENST00000622020 SNX22Q96L94 193 aa13.52□□□□□ -0.24
NPHP4-211ENST00000622020 CHD3Q12873 2000 aaKnown RBP13.52□□□□□ -0.24
NPHP4-211ENST00000622020 IGHV1-45A0A0A0MS14 117 aa13.52□□□□□ -0.25
NPHP4-211ENST00000622020 PPP1R2P9O14990 202 aa13.52□□□□□ -0.25
NPHP4-211ENST00000622020 CD200P41217 278 aa13.52□□□□□ -0.25
NPHP4-211ENST00000622020 ELLP55199 621 aaPredicted RBP13.52□□□□□ -0.25
NPHP4-211ENST00000622020 RPS16P62249 146 aaKnown RBP13.52□□□□□ -0.25
NPHP4-211ENST00000622020 GAMTQ14353 236 aa13.52□□□□□ -0.25
NPHP4-211ENST00000622020 KHDC3LQ587J8 217 aa13.52□□□□□ -0.25
NPHP4-211ENST00000622020 VASH2Q86V25 355 aa13.52□□□□□ -0.25
NPHP4-211ENST00000622020 OR10D3Q8NH80 312 aa13.52□□□□□ -0.25
NPHP4-211ENST00000622020 C14orf144Q96I85 54 aa13.52□□□□□ -0.25
NPHP4-211ENST00000622020 C11orf1Q9H5F2 150 aa13.52□□□□□ -0.25
NPHP4-211ENST00000622020 DOCK11Q5JSL3 2073 aa13.51□□□□□ -0.25
NPHP4-211ENST00000622020 CNOT4O95628 575 aaKnown RBP13.51□□□□□ -0.25
NPHP4-211ENST00000622020 TUBG1P23258 451 aa13.51□□□□□ -0.25
NPHP4-211ENST00000622020 UCP3P55916 312 aa13.51□□□□□ -0.25
NPHP4-211ENST00000622020 KDF1Q8NAX2 398 aaPredicted RBP13.51□□□□□ -0.25
NPHP4-211ENST00000622020 ABHD5Q8WTS1 349 aa13.51□□□□□ -0.25
NPHP4-211ENST00000622020 RPRMQ9NS64 109 aa13.51□□□□□ -0.25
NPHP4-211ENST00000622020 C5orf49A4QMS7 147 aa13.51□□□□□ -0.25
NPHP4-211ENST00000622020 OR6C6A6NF89 314 aa13.51□□□□□ -0.25
NPHP4-211ENST00000622020 ARGFXA6NJG6 315 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms