RNA–Protein interactions for RNA: ENST00000621870.4

GGA3-223, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 1 (best)

Gene GGA3, Length 4,034 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-223ENST00000621870 A0A0G2JMZ2 1700 aa8.02□□□□□ -1.13
GGA3-223ENST00000621870 LRRC37A2A6NM11 1700 aa8.02□□□□□ -1.13
GGA3-223ENST00000621870 IGKV3-7A0A075B6H7 116 aa8.02□□□□□ -1.13
GGA3-223ENST00000621870 RPS10-NUDT3A0A1W2PQS6 291 aa8.02□□□□□ -1.13
GGA3-223ENST00000621870 OOEPA6NGQ2 149 aa8.02□□□□□ -1.13
GGA3-223ENST00000621870 COX7A2P2O60397 106 aa8.02□□□□□ -1.13
GGA3-223ENST00000621870 PDGFAP04085 211 aa8.02□□□□□ -1.13
GGA3-223ENST00000621870 OR13C7P0DN81 318 aa8.02□□□□□ -1.13
GGA3-223ENST00000621870 RPS10P46783 165 aaKnown RBP8.02□□□□□ -1.13
GGA3-223ENST00000621870 MMDQ15546 238 aa8.02□□□□□ -1.13
GGA3-223ENST00000621870 HAGHQ16775 308 aa8.02□□□□□ -1.13
GGA3-223ENST00000621870 NFAM1Q8NET5 270 aaPredicted RBP8.02□□□□□ -1.13
GGA3-223ENST00000621870 OR4S2Q8NH73 311 aa8.02□□□□□ -1.13
GGA3-223ENST00000621870 BSCL2Q96G97 398 aaPredicted RBP8.02□□□□□ -1.13
GGA3-223ENST00000621870 HDHD3Q9BSH5 251 aaPredicted RBP8.02□□□□□ -1.13
GGA3-223ENST00000621870 PLSCR3Q9NRY6 295 aa8.02□□□□□ -1.13
GGA3-223ENST00000621870 OR1A1Q9P1Q5 309 aa8.02□□□□□ -1.13
GGA3-223ENST00000621870 RCL1Q9Y2P8 373 aaKnown RBP8.02□□□□□ -1.13
GGA3-223ENST00000621870 LAMA3Q16787 3333 aa8.02□□□□□ -1.13
GGA3-223ENST00000621870 LAMA2P24043 3122 aaKnown RBP8.01□□□□□ -1.13
GGA3-223ENST00000621870 A0A0U1RQV5 110 aa8.01□□□□□ -1.13
GGA3-223ENST00000621870 C3orf85A0A1B0GTC6 90 aa8.01□□□□□ -1.13
GGA3-223ENST00000621870 ZNF320A2RRD8 509 aa8.01□□□□□ -1.13
GGA3-223ENST00000621870 TRDCB7Z8K6 153 aa8.01□□□□□ -1.13
GGA3-223ENST00000621870 SLC25A6P12236 298 aa8.01□□□□□ -1.13
GGA3-223ENST00000621870 HOXB1P14653 301 aaPredicted RBP8.01□□□□□ -1.13
GGA3-223ENST00000621870 COX5AP20674 150 aa8.01□□□□□ -1.13
GGA3-223ENST00000621870 PPP1CCP36873 323 aaKnown RBP8.01□□□□□ -1.13
GGA3-223ENST00000621870 SCAND1P57086 179 aa8.01□□□□□ -1.13
GGA3-223ENST00000621870 ZBTB37Q5TC79 503 aa8.01□□□□□ -1.13
GGA3-223ENST00000621870 ETV3LQ6ZN32 361 aa8.01□□□□□ -1.13
GGA3-223ENST00000621870 RELL2Q8NC24 303 aaPredicted RBP8.01□□□□□ -1.13
GGA3-223ENST00000621870 HSD17B10Q99714 261 aaKnown RBP8.01□□□□□ -1.13
GGA3-223ENST00000621870 SEBOXQ9HB31 216 aaPredicted RBP8.01□□□□□ -1.13
GGA3-223ENST00000621870 CCL28Q9NRJ3 127 aa8.01□□□□□ -1.13
GGA3-223ENST00000621870 MTCH1Q9NZJ7 389 aa8.01□□□□□ -1.13
GGA3-223ENST00000621870 TMED3Q9Y3Q3 217 aa8.01□□□□□ -1.13
GGA3-223ENST00000621870 KCNMB2Q9Y691 235 aa8.01□□□□□ -1.13
GGA3-223ENST00000621870 UBE2L5PA0A1B0GUS4 154 aa8.01□□□□□ -1.13
GGA3-223ENST00000621870 SYNGR3O43761 229 aa8.01□□□□□ -1.13
GGA3-223ENST00000621870 LANCL1O43813 399 aa8.01□□□□□ -1.13
GGA3-223ENST00000621870 ADAP1O75689 374 aa8.01□□□□□ -1.13
GGA3-223ENST00000621870 ZNF362Q5T0B9 420 aaPredicted RBP8.01□□□□□ -1.13
GGA3-223ENST00000621870 SPNS3Q6ZMD2 512 aa8.01□□□□□ -1.13
GGA3-223ENST00000621870 ZFP82Q8N141 532 aa8.01□□□□□ -1.13
GGA3-223ENST00000621870 GSX2Q9BZM3 304 aa8.01□□□□□ -1.13
GGA3-223ENST00000621870 CACFD1Q9UGQ2 172 aa8.01□□□□□ -1.13
GGA3-223ENST00000621870 HILPDAQ9Y5L2 63 aa8.01□□□□□ -1.13
GGA3-223ENST00000621870 NPTNQ9Y639 398 aa8.01□□□□□ -1.13
GGA3-223ENST00000621870 TMEM210A6NLX4 147 aa8.01□□□□□ -1.13
GGA3-223ENST00000621870 ZNF785A8K8V0 405 aa8.01□□□□□ -1.13
GGA3-223ENST00000621870 DVL1O14640 695 aa8.01□□□□□ -1.13
GGA3-223ENST00000621870 PPYP01298 95 aa8.01□□□□□ -1.13
GGA3-223ENST00000621870 C1QBP02746 253 aa8.01□□□□□ -1.13
GGA3-223ENST00000621870 METTL15P1P0C7V9 234 aa8.01□□□□□ -1.13
GGA3-223ENST00000621870 SLC25A4P12235 298 aa8.01□□□□□ -1.13
GGA3-223ENST00000621870 EFNB2P52799 333 aa8.01□□□□□ -1.13
GGA3-223ENST00000621870 DVL1P1P54792 670 aaPredicted RBP8.01□□□□□ -1.13
GGA3-223ENST00000621870 SNAI3Q3KNW1 292 aa8.01□□□□□ -1.13
GGA3-223ENST00000621870 CEACAM21Q3KPI0 293 aa8.01□□□□□ -1.13
GGA3-223ENST00000621870 TMEM65Q6PI78 240 aa8.01□□□□□ -1.13
GGA3-223ENST00000621870 BAP18Q8IXM2 172 aa8.01□□□□□ -1.13
GGA3-223ENST00000621870 ZDHHC22Q8N966 263 aa8.01□□□□□ -1.13
GGA3-223ENST00000621870 PXT1Q8NFP0 134 aa8.01□□□□□ -1.13
GGA3-223ENST00000621870 FLVCR1-AS1Q8TAF5 88 aa8.01□□□□□ -1.13
GGA3-223ENST00000621870 ADTRPQ96IZ2 230 aa8.01□□□□□ -1.13
GGA3-223ENST00000621870 HARBI1Q96MB7 349 aa8.01□□□□□ -1.13
GGA3-223ENST00000621870 ZFYVE26Q68DK2 2539 aa8.01□□□□□ -1.13
GGA3-223ENST00000621870 IGHV3-72A0A0B4J1Y9 119 aa8□□□□□ -1.13
GGA3-223ENST00000621870 NPIPB9F8W1W9 429 aa8□□□□□ -1.13
GGA3-223ENST00000621870 SYNGR1O43759 233 aa8□□□□□ -1.13
GGA3-223ENST00000621870 SNAPINO95295 136 aa8□□□□□ -1.13
GGA3-223ENST00000621870 CRHP06850 196 aa8□□□□□ -1.13
GGA3-223ENST00000621870 RRASP10301 218 aa8□□□□□ -1.13
GGA3-223ENST00000621870 BPIFB3P59826 476 aa8□□□□□ -1.13
GGA3-223ENST00000621870 COL10A1Q03692 680 aa8□□□□□ -1.13
GGA3-223ENST00000621870 ACOT6Q3I5F7 207 aaPredicted RBP8□□□□□ -1.13
GGA3-223ENST00000621870 VSTM2AQ8TAG5 236 aa8□□□□□ -1.13
GGA3-223ENST00000621870 RPUSD4Q96CM3 377 aaKnown RBP8□□□□□ -1.13
GGA3-223ENST00000621870 TVP23CQ96ET8 276 aa8□□□□□ -1.13
GGA3-223ENST00000621870 RASL11BQ9BPW5 248 aa8□□□□□ -1.13
GGA3-223ENST00000621870 ACTR3CQ9C0K3 210 aaPredicted RBP8□□□□□ -1.13
GGA3-223ENST00000621870 ANK1P16157 1881 aa8□□□□□ -1.13
GGA3-223ENST00000621870 SPTBN4Q9H254 2564 aa8□□□□□ -1.13
GGA3-223ENST00000621870 A0A1W2PN81 502 aa8□□□□□ -1.13
GGA3-223ENST00000621870 MGST3O14880 152 aa8□□□□□ -1.13
GGA3-223ENST00000621870 TXNL1O43396 289 aa8□□□□□ -1.13
GGA3-223ENST00000621870 LMX1BO60663 402 aa8□□□□□ -1.13
GGA3-223ENST00000621870 CA11O75493 328 aa8□□□□□ -1.13
GGA3-223ENST00000621870 HNF1AP20823 631 aa8□□□□□ -1.13
GGA3-223ENST00000621870 FGF7P21781 194 aa8□□□□□ -1.13
GGA3-223ENST00000621870 CHRNA7P36544 502 aa8□□□□□ -1.13
GGA3-223ENST00000621870 ARF6P62330 175 aa8□□□□□ -1.13
GGA3-223ENST00000621870 S100A12P80511 92 aa8□□□□□ -1.13
GGA3-223ENST00000621870 USF2Q15853 346 aaPredicted RBP8□□□□□ -1.13
GGA3-223ENST00000621870 GABRA6Q16445 453 aa8□□□□□ -1.13
GGA3-223ENST00000621870 C1orf174Q8IYL3 243 aa8□□□□□ -1.13
GGA3-223ENST00000621870 BPIFCQ8NFQ6 507 aa8□□□□□ -1.13
GGA3-223ENST00000621870 WNT5BQ9H1J7 359 aa8□□□□□ -1.13
GGA3-223ENST00000621870 NAA60Q9H7X0 242 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms