RNA–Protein interactions for RNA: ENST00000621526.4

CPNE3-211, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 279 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-211ENST00000621526 CLVS2Q5SYC1 327 aa1.72□□□□□ -2.13
CPNE3-211ENST00000621526 UTF1Q5T230 341 aa1.72□□□□□ -2.13
CPNE3-211ENST00000621526 LIPKQ5VXJ0 399 aa1.72□□□□□ -2.13
CPNE3-211ENST00000621526 ZNF57Q68EA5 555 aaPredicted RBP1.72□□□□□ -2.13
CPNE3-211ENST00000621526 CDPF1Q6NVV7 123 aa1.72□□□□□ -2.13
CPNE3-211ENST00000621526 DEGS2Q6QHC5 323 aa1.72□□□□□ -2.13
CPNE3-211ENST00000621526 TBPL2Q6SJ96 375 aa1.72□□□□□ -2.13
CPNE3-211ENST00000621526 FAM131AQ6UXB0 335 aa1.72□□□□□ -2.13
CPNE3-211ENST00000621526 GSG1LQ6UXU4 331 aa1.72□□□□□ -2.13
CPNE3-211ENST00000621526 DLEU7Q6UYE1 221 aa1.72□□□□□ -2.13
CPNE3-211ENST00000621526 ZNF730Q6ZMV8 503 aa1.72□□□□□ -2.13
CPNE3-211ENST00000621526 Q6ZSN1 163 aa1.72□□□□□ -2.13
CPNE3-211ENST00000621526 Q6ZSR3 168 aa1.72□□□□□ -2.13
CPNE3-211ENST00000621526 SLC25A48Q6ZT89 311 aaKnown RBP1.72□□□□□ -2.13
CPNE3-211ENST00000621526 SHFQ7M4L6 423 aa1.72□□□□□ -2.13
CPNE3-211ENST00000621526 KCTD20Q7Z5Y7 419 aa1.72□□□□□ -2.13
CPNE3-211ENST00000621526 PPP1R27Q86WC6 154 aa1.72□□□□□ -2.13
CPNE3-211ENST00000621526 GPHB5Q86YW7 130 aa1.72□□□□□ -2.13
CPNE3-211ENST00000621526 MICU2Q8IYU8 434 aa1.72□□□□□ -2.13
CPNE3-211ENST00000621526 OFCC1Q8IZS5 231 aa1.72□□□□□ -2.13
CPNE3-211ENST00000621526 FAM58AQ8N1B3 248 aa1.72□□□□□ -2.13
CPNE3-211ENST00000621526 ZNF781Q8N8C0 355 aa1.72□□□□□ -2.13
CPNE3-211ENST00000621526 OR13C2Q8NGS9 318 aa1.72□□□□□ -2.13
CPNE3-211ENST00000621526 OR11H2Q8NH07 326 aa1.72□□□□□ -2.13
CPNE3-211ENST00000621526 OR4K13Q8NH42 304 aa1.72□□□□□ -2.13
CPNE3-211ENST00000621526 OR52J3Q8NH60 311 aa1.72□□□□□ -2.13
CPNE3-211ENST00000621526 RP9Q8TA86 221 aaKnown RBP1.72□□□□□ -2.13
CPNE3-211ENST00000621526 CEP19Q96LK0 163 aa1.72□□□□□ -2.13
CPNE3-211ENST00000621526 PPP1R36Q96LQ0 422 aa1.72□□□□□ -2.13
CPNE3-211ENST00000621526 PRRC1Q96M27 445 aa1.72□□□□□ -2.13
CPNE3-211ENST00000621526 MS4A10Q96PG2 267 aa1.72□□□□□ -2.13
CPNE3-211ENST00000621526 ERMAPQ96PL5 475 aaPredicted RBP1.72□□□□□ -2.13
CPNE3-211ENST00000621526 ZNF251Q9BRH9 671 aa1.72□□□□□ -2.13
CPNE3-211ENST00000621526 FNDC11Q9BVV2 318 aa1.72□□□□□ -2.13
CPNE3-211ENST00000621526 TMEM120AQ9BXJ8 343 aa1.72□□□□□ -2.13
CPNE3-211ENST00000621526 ANKRD60Q9BZ19 345 aa1.72□□□□□ -2.13
CPNE3-211ENST00000621526 C6orf62Q9GZU0 229 aaPredicted RBP1.72□□□□□ -2.13
CPNE3-211ENST00000621526 WFDC10AQ9H1F0 79 aa1.72□□□□□ -2.13
CPNE3-211ENST00000621526 KAT8Q9H7Z6 458 aaKnown RBP1.72□□□□□ -2.13
CPNE3-211ENST00000621526 RPRD1BQ9NQG5 326 aaKnown RBP1.72□□□□□ -2.13
CPNE3-211ENST00000621526 PARP11Q9NR21 331 aa1.72□□□□□ -2.13
CPNE3-211ENST00000621526 IDI2-AS1Q9NZ38 188 aa1.72□□□□□ -2.13
CPNE3-211ENST00000621526 MDFICQ9P1T7 246 aa1.72□□□□□ -2.13
CPNE3-211ENST00000621526 IGLV2-18A0A075B6J9 118 aa1.71□□□□□ -2.14
CPNE3-211ENST00000621526 DEFB131BA0A096LNP1 70 aa1.71□□□□□ -2.14
CPNE3-211ENST00000621526 IGHV3-72A0A0B4J1Y9 119 aa1.71□□□□□ -2.14
CPNE3-211ENST00000621526 TRBV2A0A0J9YWF9 115 aa1.71□□□□□ -2.14
CPNE3-211ENST00000621526 NBDYA0A0U1RRE5 68 aa1.71□□□□□ -2.14
CPNE3-211ENST00000621526 A0A1W2PRQ8 180 aa1.71□□□□□ -2.14
CPNE3-211ENST00000621526 ANKRD34BA5PLL1 514 aa1.71□□□□□ -2.14
CPNE3-211ENST00000621526 FAM172BPA6NC97 362 aa1.71□□□□□ -2.14
CPNE3-211ENST00000621526 TVP23AA6NH52 213 aa1.71□□□□□ -2.14
CPNE3-211ENST00000621526 UNC119BA6NIH7 251 aa1.71□□□□□ -2.14
CPNE3-211ENST00000621526 C2orf70A6NJV1 201 aa1.71□□□□□ -2.14
CPNE3-211ENST00000621526 FAM90A7PA6NKC0 464 aa1.71□□□□□ -2.14
CPNE3-211ENST00000621526 FAM90A23PA8MXZ1 464 aa1.71□□□□□ -2.14
CPNE3-211ENST00000621526 FFAR1O14842 300 aa1.71□□□□□ -2.14
CPNE3-211ENST00000621526 UBDO15205 165 aa1.71□□□□□ -2.14
CPNE3-211ENST00000621526 NBR2O15453 112 aa1.71□□□□□ -2.14
CPNE3-211ENST00000621526 LANCL1O43813 399 aa1.71□□□□□ -2.14
CPNE3-211ENST00000621526 ORC5O43913 435 aa1.71□□□□□ -2.14
CPNE3-211ENST00000621526 DHRS3O75911 302 aa1.71□□□□□ -2.14
CPNE3-211ENST00000621526 INMTO95050 263 aa1.71□□□□□ -2.14
CPNE3-211ENST00000621526 SERPINA3P01011 423 aa1.71□□□□□ -2.14
CPNE3-211ENST00000621526 IL1AP01583 271 aa1.71□□□□□ -2.14
CPNE3-211ENST00000621526 PLA2G1BP04054 148 aaKnown RBP1.71□□□□□ -2.14
CPNE3-211ENST00000621526 CSTBP04080 98 aaKnown RBP1.71□□□□□ -2.14
CPNE3-211ENST00000621526 H2BFMP0C1H6 154 aa1.71□□□□□ -2.14
CPNE3-211ENST00000621526 C8orf88P0DMB2 117 aa1.71□□□□□ -2.14
CPNE3-211ENST00000621526 PRB4P10163 310 aaPredicted RBP1.71□□□□□ -2.14
CPNE3-211ENST00000621526 SLC2A2P11168 524 aaPredicted RBP1.71□□□□□ -2.14
CPNE3-211ENST00000621526 MIFP14174 115 aa1.71□□□□□ -2.14
CPNE3-211ENST00000621526 EPHA2P29317 976 aa1.71□□□□□ -2.14
CPNE3-211ENST00000621526 KDELR2P33947 212 aa1.71□□□□□ -2.14
CPNE3-211ENST00000621526 RPS27P42677 84 aaKnown RBP1.71□□□□□ -2.14
CPNE3-211ENST00000621526 OMPP47874 163 aa1.71□□□□□ -2.14
CPNE3-211ENST00000621526 REG1BP48304 166 aa1.71□□□□□ -2.14
CPNE3-211ENST00000621526 KCNJ3P48549 501 aa1.71□□□□□ -2.14
CPNE3-211ENST00000621526 SLC1A6P48664 564 aa1.71□□□□□ -2.14
CPNE3-211ENST00000621526 GZMMP51124 257 aa1.71□□□□□ -2.14
CPNE3-211ENST00000621526 KRTAP10-2P60368 255 aa1.71□□□□□ -2.14
CPNE3-211ENST00000621526 BNIP1Q12981 228 aa1.71□□□□□ -2.14
CPNE3-211ENST00000621526 DGCR6Q14129 220 aa1.71□□□□□ -2.14
CPNE3-211ENST00000621526 MMDQ15546 238 aa1.71□□□□□ -2.14
CPNE3-211ENST00000621526 VMACQ2NL98 169 aa1.71□□□□□ -2.14
CPNE3-211ENST00000621526 KRT71Q3SY84 523 aa1.71□□□□□ -2.14
CPNE3-211ENST00000621526 TMEM41BQ5BJD5 291 aa1.71□□□□□ -2.14
CPNE3-211ENST00000621526 PAGE3Q5JUK9 113 aa1.71□□□□□ -2.14
CPNE3-211ENST00000621526 KRBOX4Q5JUW0 171 aa1.71□□□□□ -2.14
CPNE3-211ENST00000621526 ATAD3CQ5T2N8 411 aa1.71□□□□□ -2.14
CPNE3-211ENST00000621526 PLCXD3Q63HM9 321 aa1.71□□□□□ -2.14
CPNE3-211ENST00000621526 C8orf82Q6P1X6 216 aaPredicted RBP1.71□□□□□ -2.14
CPNE3-211ENST00000621526 UNQ5815/PRO19632Q6UWF5 114 aa1.71□□□□□ -2.14
CPNE3-211ENST00000621526 RBPMS2Q6ZRY4 209 aaKnown RBP1.71□□□□□ -2.14
CPNE3-211ENST00000621526 Q6ZTC4 211 aa1.71□□□□□ -2.14
CPNE3-211ENST00000621526 ASRGL1Q7L266 308 aa1.71□□□□□ -2.14
CPNE3-211ENST00000621526 TRPM8Q7Z2W7 1104 aa1.71□□□□□ -2.14
CPNE3-211ENST00000621526 LINC00596Q86U02 117 aa1.71□□□□□ -2.14
CPNE3-211ENST00000621526 FUNDC1Q8IVP5 155 aa1.71□□□□□ -2.14
CPNE3-211ENST00000621526 TMEM61Q8N0U2 210 aa1.71□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms