RNA–Protein interactions for RNA: ENST00000620514.1

HMGN3-203, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 3 BASIC

Gene HMGN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-203ENST00000620514 MED21Q13503 144 aa13.73□□□□□ -0.21
HMGN3-203ENST00000620514 Q499Y3 187 aa13.73□□□□□ -0.21
HMGN3-203ENST00000620514 OGFRL1Q5TC84 451 aaPredicted RBP13.73□□□□□ -0.21
HMGN3-203ENST00000620514 ZNF565Q8N9K5 539 aa13.73□□□□□ -0.21
HMGN3-203ENST00000620514 ZNF184Q99676 751 aaPredicted RBP13.73□□□□□ -0.21
HMGN3-203ENST00000620514 OCSTAMPQ9BR26 566 aa13.73□□□□□ -0.21
HMGN3-203ENST00000620514 IDI2-AS1Q9NZ38 188 aa13.73□□□□□ -0.21
HMGN3-203ENST00000620514 HSPE1-MOB4S4R3N1 261 aa13.73□□□□□ -0.21
HMGN3-203ENST00000620514 EFCAB10A6NFE3 127 aa13.72□□□□□ -0.21
HMGN3-203ENST00000620514 SH2D7A6NKC9 451 aaPredicted RBP13.72□□□□□ -0.21
HMGN3-203ENST00000620514 OR7C1O76099 320 aaPredicted RBP13.72□□□□□ -0.21
HMGN3-203ENST00000620514 IL1AP01583 271 aa13.72□□□□□ -0.21
HMGN3-203ENST00000620514 CSTBP04080 98 aaKnown RBP13.72□□□□□ -0.21
HMGN3-203ENST00000620514 C21orf33P30042 268 aaPredicted RBP13.72□□□□□ -0.21
HMGN3-203ENST00000620514 SSTR5P35346 364 aa13.72□□□□□ -0.21
HMGN3-203ENST00000620514 CEACAM3P40198 252 aa13.72□□□□□ -0.21
HMGN3-203ENST00000620514 YIF1BQ5BJH7 314 aa13.72□□□□□ -0.21
HMGN3-203ENST00000620514 NHLRC3Q5JS37 347 aa13.72□□□□□ -0.21
HMGN3-203ENST00000620514 C8orf59Q8N0T1 100 aaPredicted RBP13.72□□□□□ -0.21
HMGN3-203ENST00000620514 OR9G1Q8NH87 305 aa13.72□□□□□ -0.21
HMGN3-203ENST00000620514 OR14A2Q96R54 314 aa13.72□□□□□ -0.21
HMGN3-203ENST00000620514 CITED2Q99967 270 aaPredicted RBP13.72□□□□□ -0.21
HMGN3-203ENST00000620514 SLC25A33Q9BSK2 321 aa13.72□□□□□ -0.21
HMGN3-203ENST00000620514 MMP28Q9H239 520 aa13.72□□□□□ -0.21
HMGN3-203ENST00000620514 LINC00574Q9H8X3 128 aa13.72□□□□□ -0.21
HMGN3-203ENST00000620514 PSORS1C1Q9UIG5 152 aa13.72□□□□□ -0.21
HMGN3-203ENST00000620514 TRBV5-7A0A0A0MS05 114 aa13.71□□□□□ -0.21
HMGN3-203ENST00000620514 ADARB2-AS1A8MUL3 147 aa13.71□□□□□ -0.21
HMGN3-203ENST00000620514 NPIPB11E5RHQ5 1161 aa13.71□□□□□ -0.21
HMGN3-203ENST00000620514 J3QR06 171 aa13.71□□□□□ -0.21
HMGN3-203ENST00000620514 CASQ2O14958 399 aaPredicted RBP13.71□□□□□ -0.21
HMGN3-203ENST00000620514 PEX14O75381 377 aa13.71□□□□□ -0.21
HMGN3-203ENST00000620514 GPX5O75715 221 aa13.71□□□□□ -0.21
HMGN3-203ENST00000620514 OPN1MWP04001 364 aa13.71□□□□□ -0.21
HMGN3-203ENST00000620514 OPN1MW2P0DN77 364 aa13.71□□□□□ -0.21
HMGN3-203ENST00000620514 OPN1MW3P0DN78 364 aa13.71□□□□□ -0.21
HMGN3-203ENST00000620514 KCNJ3P48549 501 aa13.71□□□□□ -0.21
HMGN3-203ENST00000620514 PAX5Q02548 391 aa13.71□□□□□ -0.21
HMGN3-203ENST00000620514 SLC22A6Q4U2R8 563 aa13.71□□□□□ -0.21
HMGN3-203ENST00000620514 AHSA2Q719I0 299 aa13.71□□□□□ -0.21
HMGN3-203ENST00000620514 C16orf82Q7Z2V1 217 aa13.71□□□□□ -0.21
HMGN3-203ENST00000620514 BPIFB6Q8NFQ5 453 aa13.71□□□□□ -0.21
HMGN3-203ENST00000620514 FBLIM1Q8WUP2 373 aa13.71□□□□□ -0.21
HMGN3-203ENST00000620514 CREB3L1Q96BA8 519 aa13.71□□□□□ -0.21
HMGN3-203ENST00000620514 S100A13Q99584 98 aa13.71□□□□□ -0.21
HMGN3-203ENST00000620514 IFT22Q9H7X7 185 aa13.71□□□□□ -0.21
HMGN3-203ENST00000620514 LIN7BQ9HAP6 207 aa13.71□□□□□ -0.21
HMGN3-203ENST00000620514 CNOT2Q9NZN8 540 aaKnown RBP13.71□□□□□ -0.21
HMGN3-203ENST00000620514 PSG11Q9UQ72 335 aa13.71□□□□□ -0.21
HMGN3-203ENST00000620514 G3V4G9 280 aa13.7□□□□□ -0.22
HMGN3-203ENST00000620514 H3BUI4 141 aa13.7□□□□□ -0.22
HMGN3-203ENST00000620514 OR2F2O95006 317 aa13.7□□□□□ -0.22
HMGN3-203ENST00000620514 FSTP19883 344 aa13.7□□□□□ -0.22
HMGN3-203ENST00000620514 GNG10P50151 68 aa13.7□□□□□ -0.22
HMGN3-203ENST00000620514 ARHGDIBP52566 201 aa13.7□□□□□ -0.22
HMGN3-203ENST00000620514 DIAPH2-AS1Q14236 149 aa13.7□□□□□ -0.22
HMGN3-203ENST00000620514 ABCA11PQ4W5N1 156 aa13.7□□□□□ -0.22
HMGN3-203ENST00000620514 ATAD3CQ5T2N8 411 aa13.7□□□□□ -0.22
HMGN3-203ENST00000620514 STX19Q8N4C7 294 aa13.7□□□□□ -0.22
HMGN3-203ENST00000620514 UBALD1Q8TB05 177 aa13.7□□□□□ -0.22
HMGN3-203ENST00000620514 CAPSLQ8WWF8 208 aa13.7□□□□□ -0.22
HMGN3-203ENST00000620514 MUL1Q969V5 352 aa13.7□□□□□ -0.22
HMGN3-203ENST00000620514 RPEQ96AT9 228 aa13.7□□□□□ -0.22
HMGN3-203ENST00000620514 RBM14Q96PK6 669 aaKnown RBP13.7□□□□□ -0.22
HMGN3-203ENST00000620514 PLCXD1Q9NUJ7 323 aa13.7□□□□□ -0.22
HMGN3-203ENST00000620514 CKLFQ9UBR5 152 aa13.7□□□□□ -0.22
HMGN3-203ENST00000620514 A0A1W2PPE3 182 aa13.69□□□□□ -0.22
HMGN3-203ENST00000620514 OOSP1A8MZH6 123 aa13.69□□□□□ -0.22
HMGN3-203ENST00000620514 MYL12BO14950 172 aa13.69□□□□□ -0.22
HMGN3-203ENST00000620514 PIN1P1O15428 100 aa13.69□□□□□ -0.22
HMGN3-203ENST00000620514 MAS1P04201 325 aa13.69□□□□□ -0.22
HMGN3-203ENST00000620514 AMY1AP04745 511 aa13.69□□□□□ -0.22
HMGN3-203ENST00000620514 AMY2AP04746 511 aa13.69□□□□□ -0.22
HMGN3-203ENST00000620514 LPLP06858 475 aa13.69□□□□□ -0.22
HMGN3-203ENST00000620514 TAS2R43P59537 309 aa13.69□□□□□ -0.22
HMGN3-203ENST00000620514 FAM53AQ6NSI3 398 aaPredicted RBP13.69□□□□□ -0.22
HMGN3-203ENST00000620514 CCDC144NLQ6NUI1 221 aa13.69□□□□□ -0.22
HMGN3-203ENST00000620514 NDUFA11Q86Y39 141 aa13.69□□□□□ -0.22
HMGN3-203ENST00000620514 JAGN1Q8N5M9 183 aa13.69□□□□□ -0.22
HMGN3-203ENST00000620514 CCDC107Q8WV48 283 aa13.69□□□□□ -0.22
HMGN3-203ENST00000620514 TOMM40LQ969M1 308 aa13.69□□□□□ -0.22
HMGN3-203ENST00000620514 AKR1E2Q96JD6 320 aa13.69□□□□□ -0.22
HMGN3-203ENST00000620514 DERL3Q96Q80 235 aa13.69□□□□□ -0.22
HMGN3-203ENST00000620514 FKBP14Q9NWM8 211 aa13.69□□□□□ -0.22
HMGN3-203ENST00000620514 PAK1IP1Q9NWT1 392 aaPredicted RBP13.69□□□□□ -0.22
HMGN3-203ENST00000620514 MRPS28Q9Y2Q9 187 aaKnown RBP13.69□□□□□ -0.22
HMGN3-203ENST00000620514 PRKDCP78527 4128 aaKnown RBP13.68□□□□□ -0.22
HMGN3-203ENST00000620514 TMEM30CPA0ZSE6 113 aa13.68□□□□□ -0.22
HMGN3-203ENST00000620514 ZNF780AO75290 641 aaPredicted RBP13.68□□□□□ -0.22
HMGN3-203ENST00000620514 GTF2F2P13984 249 aa13.68□□□□□ -0.22
HMGN3-203ENST00000620514 CELP19835 753 aa13.68□□□□□ -0.22
HMGN3-203ENST00000620514 MNDAP41218 407 aa13.68□□□□□ -0.22
HMGN3-203ENST00000620514 WNT4P56705 351 aa13.68□□□□□ -0.22
HMGN3-203ENST00000620514 MPV17LQ2QL34 196 aa13.68□□□□□ -0.22
HMGN3-203ENST00000620514 GLIPR1L1Q6UWM5 242 aa13.68□□□□□ -0.22
HMGN3-203ENST00000620514 LINC00596Q86U02 117 aa13.68□□□□□ -0.22
HMGN3-203ENST00000620514 NANOGP1Q8N7R0 232 aa13.68□□□□□ -0.22
HMGN3-203ENST00000620514 OR5AU1Q8NGC0 362 aa13.68□□□□□ -0.22
HMGN3-203ENST00000620514 OR56B4Q8NH76 319 aa13.68□□□□□ -0.22
HMGN3-203ENST00000620514 NEK7Q8TDX7 302 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms