RNA–Protein interactions for RNA: ENST00000619750.1

PCDHGA3-203, Transcript of protocadherin gamma subfamily A, 3, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGA3, Length 2,695 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-203ENST00000619750 Q6ZSR3 168 aa12.3□□□□□ -0.44
PCDHGA3-203ENST00000619750 SELENOHQ8IZQ5 122 aaKnown RBP12.3□□□□□ -0.44
PCDHGA3-203ENST00000619750 PBDC1Q9BVG4 233 aa12.3□□□□□ -0.44
PCDHGA3-203ENST00000619750 PRRG4Q9BZD6 226 aa12.3□□□□□ -0.44
PCDHGA3-203ENST00000619750 TMED3Q9Y3Q3 217 aa12.3□□□□□ -0.44
PCDHGA3-203ENST00000619750 DOCK11Q5JSL3 2073 aa12.29□□□□□ -0.44
PCDHGA3-203ENST00000619750 MED12LQ86YW9 2145 aa12.29□□□□□ -0.44
PCDHGA3-203ENST00000619750 LRRC3CA6NJW4 275 aa12.29□□□□□ -0.44
PCDHGA3-203ENST00000619750 H3BQ15 152 aa12.29□□□□□ -0.44
PCDHGA3-203ENST00000619750 FGF5P12034 268 aa12.29□□□□□ -0.44
PCDHGA3-203ENST00000619750 PRDX4Q13162 271 aa12.29□□□□□ -0.44
PCDHGA3-203ENST00000619750 PMS2CLQ68D20 193 aa12.29□□□□□ -0.44
PCDHGA3-203ENST00000619750 SPSB3Q6PJ21 355 aa12.29□□□□□ -0.44
PCDHGA3-203ENST00000619750 LRTM2Q8N967 370 aa12.29□□□□□ -0.44
PCDHGA3-203ENST00000619750 OR1J1Q8NGS3 322 aa12.29□□□□□ -0.44
PCDHGA3-203ENST00000619750 OR2Y1Q8NGV0 311 aa12.29□□□□□ -0.44
PCDHGA3-203ENST00000619750 CPT1CQ8TCG5 803 aa12.29□□□□□ -0.44
PCDHGA3-203ENST00000619750 RAB39BQ96DA2 213 aa12.29□□□□□ -0.44
PCDHGA3-203ENST00000619750 ZNF552Q9H707 407 aaPredicted RBP12.29□□□□□ -0.44
PCDHGA3-203ENST00000619750 RBFOX3A6NFN3 312 aa12.29□□□□□ -0.44
PCDHGA3-203ENST00000619750 SLC22A20A6NK97 555 aa12.29□□□□□ -0.44
PCDHGA3-203ENST00000619750 ARF1P84077 181 aaKnown RBP12.29□□□□□ -0.44
PCDHGA3-203ENST00000619750 SPATA46Q5T0L3 261 aa12.29□□□□□ -0.44
PCDHGA3-203ENST00000619750 TCEAL3Q969E4 200 aa12.29□□□□□ -0.44
PCDHGA3-203ENST00000619750 CPNE4Q96A23 557 aaPredicted RBP12.29□□□□□ -0.44
PCDHGA3-203ENST00000619750 WDR54Q9H977 334 aa12.29□□□□□ -0.44
PCDHGA3-203ENST00000619750 SH2D2AQ9NP31 389 aa12.29□□□□□ -0.44
PCDHGA3-203ENST00000619750 MTCH1Q9NZJ7 389 aa12.29□□□□□ -0.44
PCDHGA3-203ENST00000619750 TNRC6BQ9UPQ9 1833 aaKnown RBP12.29□□□□□ -0.44
PCDHGA3-203ENST00000619750 ZNF732B4DXR9 585 aa12.28□□□□□ -0.44
PCDHGA3-203ENST00000619750 TK1P04183 234 aa12.28□□□□□ -0.44
PCDHGA3-203ENST00000619750 CXCL1P09341 107 aa12.28□□□□□ -0.44
PCDHGA3-203ENST00000619750 ZNF16P17020 682 aaPredicted RBP12.28□□□□□ -0.44
PCDHGA3-203ENST00000619750 MDKP21741 143 aaPredicted RBP12.28□□□□□ -0.44
PCDHGA3-203ENST00000619750 TAGLN2P37802 199 aaKnown RBP12.28□□□□□ -0.44
PCDHGA3-203ENST00000619750 FGF8P55075 233 aaPredicted RBP12.28□□□□□ -0.44
PCDHGA3-203ENST00000619750 HOXA4Q00056 320 aaPredicted RBP12.28□□□□□ -0.44
PCDHGA3-203ENST00000619750 OR2V1Q8NHB1 315 aa12.28□□□□□ -0.44
PCDHGA3-203ENST00000619750 MED13Q9UHV7 2174 aa12.28□□□□□ -0.44
PCDHGA3-203ENST00000619750 FAM166BA8MTA8 275 aa12.28□□□□□ -0.44
PCDHGA3-203ENST00000619750 IAPPP10997 89 aa12.28□□□□□ -0.44
PCDHGA3-203ENST00000619750 NDUFA6P56556 154 aa12.28□□□□□ -0.44
PCDHGA3-203ENST00000619750 HMGN3Q15651 99 aa12.28□□□□□ -0.44
PCDHGA3-203ENST00000619750 FAM209BQ5JX69 171 aa12.28□□□□□ -0.44
PCDHGA3-203ENST00000619750 SLC25A24Q6NUK1 477 aa12.28□□□□□ -0.44
PCDHGA3-203ENST00000619750 ASCL4Q6XD76 172 aa12.28□□□□□ -0.44
PCDHGA3-203ENST00000619750 OR1K1Q8NGR3 316 aa12.28□□□□□ -0.44
PCDHGA3-203ENST00000619750 RNASE11Q8TAA1 199 aaKnown RBP12.28□□□□□ -0.44
PCDHGA3-203ENST00000619750 INTS12Q96CB8 462 aaKnown RBP12.28□□□□□ -0.44
PCDHGA3-203ENST00000619750 RSG1Q9BU20 258 aa12.28□□□□□ -0.44
PCDHGA3-203ENST00000619750 NOSIPQ9Y314 301 aaKnown RBP12.28□□□□□ -0.44
PCDHGA3-203ENST00000619750 TGIF2-C20orf24A0A0A6YYL0 155 aa12.27□□□□□ -0.44
PCDHGA3-203ENST00000619750 A0A1W2PR80 420 aa12.27□□□□□ -0.44
PCDHGA3-203ENST00000619750 SRD5A2P31213 254 aa12.27□□□□□ -0.44
PCDHGA3-203ENST00000619750 UBE2KP61086 200 aa12.27□□□□□ -0.44
PCDHGA3-203ENST00000619750 EIF3IQ13347 325 aaKnown RBP12.27□□□□□ -0.44
PCDHGA3-203ENST00000619750 KIAA0141Q14154 515 aaPredicted RBP12.27□□□□□ -0.44
PCDHGA3-203ENST00000619750 OR8B8Q15620 311 aa12.27□□□□□ -0.44
PCDHGA3-203ENST00000619750 C1orf210Q8IVY1 113 aa12.27□□□□□ -0.44
PCDHGA3-203ENST00000619750 TUSC5Q8IXB3 177 aa12.27□□□□□ -0.44
PCDHGA3-203ENST00000619750 ZNF100Q8IYN0 542 aa12.27□□□□□ -0.44
PCDHGA3-203ENST00000619750 VSIRQ9H7M9 311 aa12.27□□□□□ -0.44
PCDHGA3-203ENST00000619750 STRAPQ9Y3F4 350 aaKnown RBP12.27□□□□□ -0.44
PCDHGA3-203ENST00000619750 LAMA5O15230 3695 aa12.27□□□□□ -0.44
PCDHGA3-203ENST00000619750 ZFP92A6NM28 416 aa12.27□□□□□ -0.45
PCDHGA3-203ENST00000619750 GJE1A6NN92 205 aa12.27□□□□□ -0.45
PCDHGA3-203ENST00000619750 RPL36A-HNRNPH2H7BZ11 118 aa12.27□□□□□ -0.45
PCDHGA3-203ENST00000619750 MMP7P09237 267 aaPredicted RBP12.27□□□□□ -0.45
PCDHGA3-203ENST00000619750 ZNF674Q2M3X9 581 aa12.27□□□□□ -0.45
PCDHGA3-203ENST00000619750 THNSL2Q86YJ6 484 aa12.27□□□□□ -0.45
PCDHGA3-203ENST00000619750 MRPL33O75394 65 aaKnown RBP12.26□□□□□ -0.45
PCDHGA3-203ENST00000619750 UCP2P55851 309 aa12.26□□□□□ -0.45
PCDHGA3-203ENST00000619750 DLK1P80370 383 aa12.26□□□□□ -0.45
PCDHGA3-203ENST00000619750 ZNF266Q14584 549 aa12.26□□□□□ -0.45
PCDHGA3-203ENST00000619750 IL11RAQ14626 422 aa12.26□□□□□ -0.45
PCDHGA3-203ENST00000619750 TMEM211Q6ICI0 200 aa12.26□□□□□ -0.45
PCDHGA3-203ENST00000619750 MRPL21Q7Z2W9 205 aaKnown RBP12.26□□□□□ -0.45
PCDHGA3-203ENST00000619750 IL22RA1Q8N6P7 574 aa12.26□□□□□ -0.45
PCDHGA3-203ENST00000619750 M1APQ8TC57 530 aa12.26□□□□□ -0.45
PCDHGA3-203ENST00000619750 Q8WTZ3 238 aa12.26□□□□□ -0.45
PCDHGA3-203ENST00000619750 SIGLEC12Q96PQ1 595 aa12.26□□□□□ -0.45
PCDHGA3-203ENST00000619750 SF3B5Q9BWJ5 86 aaKnown RBP12.26□□□□□ -0.45
PCDHGA3-203ENST00000619750 PLEKHF2Q9H8W4 249 aa12.26□□□□□ -0.45
PCDHGA3-203ENST00000619750 Q9N2K0 584 aa12.26□□□□□ -0.45
PCDHGA3-203ENST00000619750 LYRM2Q9NU23 88 aaPredicted RBP12.26□□□□□ -0.45
PCDHGA3-203ENST00000619750 GNG13Q9P2W3 67 aa12.26□□□□□ -0.45
PCDHGA3-203ENST00000619750 CNOT4O95628 575 aaKnown RBP12.26□□□□□ -0.45
PCDHGA3-203ENST00000619750 IGHV2-5P01817 119 aa12.26□□□□□ -0.45
PCDHGA3-203ENST00000619750 PSG2P11465 335 aa12.26□□□□□ -0.45
PCDHGA3-203ENST00000619750 SELEP16581 610 aa12.26□□□□□ -0.45
PCDHGA3-203ENST00000619750 ERVFRD-1P60508 538 aa12.26□□□□□ -0.45
PCDHGA3-203ENST00000619750 RPS16P62249 146 aaKnown RBP12.26□□□□□ -0.45
PCDHGA3-203ENST00000619750 MPV17LQ2QL34 196 aa12.26□□□□□ -0.45
PCDHGA3-203ENST00000619750 RNF212Q495C1 297 aa12.26□□□□□ -0.45
PCDHGA3-203ENST00000619750 C4orf17Q53FE4 359 aa12.26□□□□□ -0.45
PCDHGA3-203ENST00000619750 GFI1BQ5VTD9 330 aa12.26□□□□□ -0.45
PCDHGA3-203ENST00000619750 LCN15Q6UWW0 184 aa12.26□□□□□ -0.45
PCDHGA3-203ENST00000619750 OR1A1Q9P1Q5 309 aa12.26□□□□□ -0.45
PCDHGA3-203ENST00000619750 DCHS1Q96JQ0 3298 aa12.26□□□□□ -0.45
PCDHGA3-203ENST00000619750 TECTAO75443 2155 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms