RNA–Protein interactions for RNA: ENST00000618999.4

SRGAP3-213, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 5 BASIC

Gene SRGAP3, Length 3,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-213ENST00000618999 NPIPB4C9JG80 1138 aa6.06□□□□□ -1.44
SRGAP3-213ENST00000618999 M0R135 149 aa6.06□□□□□ -1.44
SRGAP3-213ENST00000618999 CBR3O75828 277 aa6.06□□□□□ -1.44
SRGAP3-213ENST00000618999 IFNA1P01562 189 aa6.06□□□□□ -1.44
SRGAP3-213ENST00000618999 LCATP04180 440 aa6.06□□□□□ -1.44
SRGAP3-213ENST00000618999 CD82P27701 267 aa6.06□□□□□ -1.44
SRGAP3-213ENST00000618999 PPP1CCP36873 323 aaKnown RBP6.06□□□□□ -1.44
SRGAP3-213ENST00000618999 PMELP40967 661 aa6.06□□□□□ -1.44
SRGAP3-213ENST00000618999 CCL11P51671 97 aa6.06□□□□□ -1.44
SRGAP3-213ENST00000618999 ZNF799Q96GE5 643 aa6.06□□□□□ -1.44
SRGAP3-213ENST00000618999 REEP6Q96HR9 211 aa6.06□□□□□ -1.44
SRGAP3-213ENST00000618999 FAAP24Q9BTP7 215 aa6.06□□□□□ -1.44
SRGAP3-213ENST00000618999 PARPBPQ9NWS1 579 aa6.06□□□□□ -1.44
SRGAP3-213ENST00000618999 KLHL13Q9P2N7 655 aa6.06□□□□□ -1.44
SRGAP3-213ENST00000618999 LHFPL6Q9Y693 200 aa6.06□□□□□ -1.44
SRGAP3-213ENST00000618999 PCNX3Q9H6A9 2034 aa6.06□□□□□ -1.44
SRGAP3-213ENST00000618999 CDRT15L2A8MXV6 281 aa6.06□□□□□ -1.44
SRGAP3-213ENST00000618999 FTCDNL1E5RQL4 147 aa6.06□□□□□ -1.44
SRGAP3-213ENST00000618999 TGOLN2O43493 480 aa6.06□□□□□ -1.44
SRGAP3-213ENST00000618999 ANGPTL7O43827 346 aa6.06□□□□□ -1.44
SRGAP3-213ENST00000618999 SSSCA1O60232 199 aa6.06□□□□□ -1.44
SRGAP3-213ENST00000618999 GDF1P27539 372 aa6.06□□□□□ -1.44
SRGAP3-213ENST00000618999 RAB11AP62491 216 aa6.06□□□□□ -1.44
SRGAP3-213ENST00000618999 PLGLB1Q02325 96 aa6.06□□□□□ -1.44
SRGAP3-213ENST00000618999 NHLH2Q02577 135 aa6.06□□□□□ -1.44
SRGAP3-213ENST00000618999 WFDC8Q8IUA0 241 aa6.06□□□□□ -1.44
SRGAP3-213ENST00000618999 OXGR1Q96P68 337 aa6.06□□□□□ -1.44
SRGAP3-213ENST00000618999 HDHD3Q9BSH5 251 aaPredicted RBP6.06□□□□□ -1.44
SRGAP3-213ENST00000618999 PIMREGQ9BSJ6 248 aa6.06□□□□□ -1.44
SRGAP3-213ENST00000618999 SH3BGRL3Q9H299 93 aa6.06□□□□□ -1.44
SRGAP3-213ENST00000618999 SEBOXQ9HB31 216 aaPredicted RBP6.06□□□□□ -1.44
SRGAP3-213ENST00000618999 DOK5Q9P104 306 aa6.06□□□□□ -1.44
SRGAP3-213ENST00000618999 TINAGQ9UJW2 476 aa6.06□□□□□ -1.44
SRGAP3-213ENST00000618999 RBM7Q9Y580 266 aaKnown RBP6.06□□□□□ -1.44
SRGAP3-213ENST00000618999 LIPGQ9Y5X9 500 aa6.06□□□□□ -1.44
SRGAP3-213ENST00000618999 ELOA3CA0A087WX78 387 aaPredicted RBP6.05□□□□□ -1.44
SRGAP3-213ENST00000618999 TRAV34A0A0B4J273 112 aa6.05□□□□□ -1.44
SRGAP3-213ENST00000618999 FAM24AA6NFZ4 105 aa6.05□□□□□ -1.44
SRGAP3-213ENST00000618999 OR7C1O76099 320 aaPredicted RBP6.05□□□□□ -1.44
SRGAP3-213ENST00000618999 FABP4P15090 132 aa6.05□□□□□ -1.44
SRGAP3-213ENST00000618999 DSCR4P56555 118 aaPredicted RBP6.05□□□□□ -1.44
SRGAP3-213ENST00000618999 ARG2P78540 354 aa6.05□□□□□ -1.44
SRGAP3-213ENST00000618999 DLK1P80370 383 aa6.05□□□□□ -1.44
SRGAP3-213ENST00000618999 EWSR1Q01844 656 aaKnown RBP eCLIP6.05□□□□□ -1.44
SRGAP3-213ENST00000618999 SRSF6Q13247 344 aaKnown RBP6.05□□□□□ -1.44
SRGAP3-213ENST00000618999 PSMF1Q92530 271 aa6.05□□□□□ -1.44
SRGAP3-213ENST00000618999 RAB39BQ96DA2 213 aa6.05□□□□□ -1.44
SRGAP3-213ENST00000618999 RBMXL1Q96E39 390 aaKnown RBP6.05□□□□□ -1.44
SRGAP3-213ENST00000618999 OR5B12Q96R08 314 aa6.05□□□□□ -1.44
SRGAP3-213ENST00000618999 GINS3Q9BRX5 216 aa6.05□□□□□ -1.44
SRGAP3-213ENST00000618999 SOX7Q9BT81 388 aa6.05□□□□□ -1.44
SRGAP3-213ENST00000618999 ULBP2Q9BZM5 246 aa6.05□□□□□ -1.44
SRGAP3-213ENST00000618999 PLEKHF2Q9H8W4 249 aa6.05□□□□□ -1.44
SRGAP3-213ENST00000618999 SLC2A9Q9NRM0 540 aa6.05□□□□□ -1.44
SRGAP3-213ENST00000618999 DHRS7CA6NNS2 312 aa6.05□□□□□ -1.44
SRGAP3-213ENST00000618999 ZNF727A8MUV8 499 aa6.05□□□□□ -1.44
SRGAP3-213ENST00000618999 ZNF205O95201 554 aa6.05□□□□□ -1.44
SRGAP3-213ENST00000618999 TK1P04183 234 aa6.05□□□□□ -1.44
SRGAP3-213ENST00000618999 HOXA5P20719 270 aa6.05□□□□□ -1.44
SRGAP3-213ENST00000618999 RRADP55042 308 aa6.05□□□□□ -1.44
SRGAP3-213ENST00000618999 RPS23P62266 143 aaKnown RBP6.05□□□□□ -1.44
SRGAP3-213ENST00000618999 RPL11P62913 178 aaKnown RBP6.05□□□□□ -1.44
SRGAP3-213ENST00000618999 OR1C1Q15619 314 aa6.05□□□□□ -1.44
SRGAP3-213ENST00000618999 CCDC54Q8NEL0 328 aa6.05□□□□□ -1.44
SRGAP3-213ENST00000618999 RCC1LQ96I51 464 aaKnown RBP6.05□□□□□ -1.44
SRGAP3-213ENST00000618999 LURAP1Q96LR2 239 aa6.05□□□□□ -1.44
SRGAP3-213ENST00000618999 MAGT1Q9H0U3 335 aa6.05□□□□□ -1.44
SRGAP3-213ENST00000618999 SIRT7Q9NRC8 400 aa6.05□□□□□ -1.44
SRGAP3-213ENST00000618999 GNG13Q9P2W3 67 aa6.05□□□□□ -1.44
SRGAP3-213ENST00000618999 A0A0G2JMM0 328 aa6.05□□□□□ -1.44
SRGAP3-213ENST00000618999 A0A1W2PPB8 328 aa6.05□□□□□ -1.44
SRGAP3-213ENST00000618999 A0A1W2PRS3 328 aa6.05□□□□□ -1.44
SRGAP3-213ENST00000618999 KIR3DP1A8MWS1 328 aa6.05□□□□□ -1.44
SRGAP3-213ENST00000618999 SPRY1O43609 319 aaPredicted RBP6.05□□□□□ -1.44
SRGAP3-213ENST00000618999 EFNA2O43921 213 aa6.05□□□□□ -1.44
SRGAP3-213ENST00000618999 CST7O76096 145 aa6.05□□□□□ -1.44
SRGAP3-213ENST00000618999 RBP2P50120 134 aa6.05□□□□□ -1.44
SRGAP3-213ENST00000618999 COTL1Q14019 142 aa6.05□□□□□ -1.44
SRGAP3-213ENST00000618999 UBE2V2Q15819 145 aa6.05□□□□□ -1.44
SRGAP3-213ENST00000618999 TMPRSS7Q7RTY8 843 aa6.05□□□□□ -1.44
SRGAP3-213ENST00000618999 DPPA2Q7Z7J5 298 aa6.05□□□□□ -1.44
SRGAP3-213ENST00000618999 OR6X1Q8NH79 312 aa6.05□□□□□ -1.44
SRGAP3-213ENST00000618999 POC1BQ8TC44 478 aa6.05□□□□□ -1.44
SRGAP3-213ENST00000618999 SPSB1Q96BD6 273 aa6.05□□□□□ -1.44
SRGAP3-213ENST00000618999 MALSU1Q96EH3 234 aa6.05□□□□□ -1.44
SRGAP3-213ENST00000618999 RARRES2Q99969 163 aa6.05□□□□□ -1.44
SRGAP3-213ENST00000618999 KIAA1456Q9P272 454 aa6.05□□□□□ -1.44
SRGAP3-213ENST00000618999 BOKQ9UMX3 212 aaPredicted RBP6.05□□□□□ -1.44
SRGAP3-213ENST00000618999 NOSIPQ9Y314 301 aaKnown RBP6.05□□□□□ -1.44
SRGAP3-213ENST00000618999 ACACAQ13085 2346 aa6.04□□□□□ -1.44
SRGAP3-213ENST00000618999 ZFP92A6NM28 416 aa6.04□□□□□ -1.44
SRGAP3-213ENST00000618999 CA11O75493 328 aa6.04□□□□□ -1.44
SRGAP3-213ENST00000618999 DFFBO76075 338 aa6.04□□□□□ -1.44
SRGAP3-213ENST00000618999 ATP6V0CP27449 155 aa6.04□□□□□ -1.44
SRGAP3-213ENST00000618999 DTX1Q86Y01 620 aa6.04□□□□□ -1.44
SRGAP3-213ENST00000618999 TMEM123Q8N131 208 aa6.04□□□□□ -1.44
SRGAP3-213ENST00000618999 OR10S1Q8NGN2 331 aa6.04□□□□□ -1.44
SRGAP3-213ENST00000618999 OR5C1Q8NGR4 320 aa6.04□□□□□ -1.44
SRGAP3-213ENST00000618999 FAM210BQ96KR6 192 aa6.04□□□□□ -1.44
SRGAP3-213ENST00000618999 CHST5Q9GZS9 411 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms