RNA–Protein interactions for RNA: ENST00000617641.4

PCDHGC3-205, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGC3, Length 2,346 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-205ENST00000617641 VRK1Q99986 396 aaPredicted RBP14.65□□□□□ -0.06
PCDHGC3-205ENST00000617641 PIGMQ9H3S5 423 aa14.65□□□□□ -0.06
PCDHGC3-205ENST00000617641 IGKV1D-13A0A0B4J2D9 117 aa14.65□□□□□ -0.06
PCDHGC3-205ENST00000617641 A0A1B0GWJ7 208 aa14.65□□□□□ -0.06
PCDHGC3-205ENST00000617641 ATP6V1G2-DDX39BF2Z307 99 aa14.65□□□□□ -0.06
PCDHGC3-205ENST00000617641 H0YIZ8 118 aa14.65□□□□□ -0.06
PCDHGC3-205ENST00000617641 IGKV1-13P0DP09 117 aa14.65□□□□□ -0.06
PCDHGC3-205ENST00000617641 MDH2P40926 338 aaKnown RBP14.65□□□□□ -0.06
PCDHGC3-205ENST00000617641 MRGPRGQ86SM5 289 aa14.65□□□□□ -0.06
PCDHGC3-205ENST00000617641 KCNRGQ8N5I3 272 aa14.65□□□□□ -0.06
PCDHGC3-205ENST00000617641 OR2Z1Q8NG97 314 aa14.65□□□□□ -0.06
PCDHGC3-205ENST00000617641 MRPL24Q96A35 216 aaKnown RBP14.65□□□□□ -0.06
PCDHGC3-205ENST00000617641 GALNT14Q96FL9 552 aa14.65□□□□□ -0.06
PCDHGC3-205ENST00000617641 RNF126Q9BV68 326 aa14.65□□□□□ -0.06
PCDHGC3-205ENST00000617641 GSKIPQ9P0R6 139 aa14.65□□□□□ -0.06
PCDHGC3-205ENST00000617641 CADP27708 2225 aa14.65□□□□□ -0.06
PCDHGC3-205ENST00000617641 A0A0D9SG52 128 aa14.64□□□□□ -0.07
PCDHGC3-205ENST00000617641 hCG_1807616A0A1W2PRN6 198 aa14.64□□□□□ -0.07
PCDHGC3-205ENST00000617641 TUSC2O75896 110 aa14.64□□□□□ -0.07
PCDHGC3-205ENST00000617641 CTXN2P0C2S0 81 aa14.64□□□□□ -0.07
PCDHGC3-205ENST00000617641 ZNF250P15622 560 aa14.64□□□□□ -0.07
PCDHGC3-205ENST00000617641 GNRHRP30968 328 aa14.64□□□□□ -0.07
PCDHGC3-205ENST00000617641 NKX6-1P78426 367 aaPredicted RBP14.64□□□□□ -0.07
PCDHGC3-205ENST00000617641 FIP1L1Q6UN15 594 aaKnown RBP14.64□□□□□ -0.07
PCDHGC3-205ENST00000617641 PCSK4Q6UW60 755 aa14.64□□□□□ -0.07
PCDHGC3-205ENST00000617641 ZNF497Q6ZNH5 498 aa14.64□□□□□ -0.07
PCDHGC3-205ENST00000617641 SYT3Q9BQG1 590 aa14.64□□□□□ -0.07
PCDHGC3-205ENST00000617641 SPEF1Q9Y4P9 236 aa14.64□□□□□ -0.07
PCDHGC3-205ENST00000617641 RPS10-NUDT3A0A1W2PQS6 291 aa14.64□□□□□ -0.07
PCDHGC3-205ENST00000617641 OR2F2O95006 317 aa14.64□□□□□ -0.07
PCDHGC3-205ENST00000617641 TFF1P04155 84 aa14.64□□□□□ -0.07
PCDHGC3-205ENST00000617641 CTAG1AP78358 180 aa14.64□□□□□ -0.07
PCDHGC3-205ENST00000617641 OR2F1Q13607 317 aa14.64□□□□□ -0.07
PCDHGC3-205ENST00000617641 ZNF345Q14585 488 aa14.64□□□□□ -0.07
PCDHGC3-205ENST00000617641 ACP7Q6ZNF0 438 aa14.64□□□□□ -0.07
PCDHGC3-205ENST00000617641 ACOT7LQ6ZUV0 252 aa14.64□□□□□ -0.07
PCDHGC3-205ENST00000617641 CCDC71LQ8N9Z2 235 aa14.64□□□□□ -0.07
PCDHGC3-205ENST00000617641 RELL2Q8NC24 303 aaPredicted RBP14.64□□□□□ -0.07
PCDHGC3-205ENST00000617641 OR4A4PQ8NGN8 299 aa14.64□□□□□ -0.07
PCDHGC3-205ENST00000617641 DCUN1D4Q92564 292 aa14.64□□□□□ -0.07
PCDHGC3-205ENST00000617641 TREM2Q9NZC2 230 aa14.64□□□□□ -0.07
PCDHGC3-205ENST00000617641 ZSCAN5BA6NJL1 495 aa14.63□□□□□ -0.07
PCDHGC3-205ENST00000617641 GLRXP35754 106 aa14.63□□□□□ -0.07
PCDHGC3-205ENST00000617641 KCNJ3P48549 501 aa14.63□□□□□ -0.07
PCDHGC3-205ENST00000617641 RAB32Q13637 225 aa14.63□□□□□ -0.07
PCDHGC3-205ENST00000617641 GGNBP1Q5YKI7 109 aa14.63□□□□□ -0.07
PCDHGC3-205ENST00000617641 ALKAL2Q6UX46 152 aa14.63□□□□□ -0.07
PCDHGC3-205ENST00000617641 KIRREL1Q96J84 757 aa14.63□□□□□ -0.07
PCDHGC3-205ENST00000617641 PSPNO60542 156 aa14.63□□□□□ -0.07
PCDHGC3-205ENST00000617641 IGHV3-13P01766 116 aa14.63□□□□□ -0.07
PCDHGC3-205ENST00000617641 IL15RAQ13261 267 aa14.63□□□□□ -0.07
PCDHGC3-205ENST00000617641 IAH1Q2TAA2 248 aaPredicted RBP14.63□□□□□ -0.07
PCDHGC3-205ENST00000617641 SHEQ5VZ18 495 aa14.63□□□□□ -0.07
PCDHGC3-205ENST00000617641 ZNF565Q8N9K5 539 aa14.63□□□□□ -0.07
PCDHGC3-205ENST00000617641 GLYATL2Q8WU03 294 aa14.63□□□□□ -0.07
PCDHGC3-205ENST00000617641 TMEM171Q8WVE6 324 aa14.63□□□□□ -0.07
PCDHGC3-205ENST00000617641 IL1F10Q8WWZ1 152 aa14.63□□□□□ -0.07
PCDHGC3-205ENST00000617641 TP53RKQ96S44 253 aa14.63□□□□□ -0.07
PCDHGC3-205ENST00000617641 SUCNR1Q9BXA5 334 aa14.63□□□□□ -0.07
PCDHGC3-205ENST00000617641 SLC5A7Q9GZV3 580 aa14.63□□□□□ -0.07
PCDHGC3-205ENST00000617641 OR5AC2Q9NZP5 309 aa14.63□□□□□ -0.07
PCDHGC3-205ENST00000617641 ZMAT5Q9UDW3 170 aaKnown RBP14.63□□□□□ -0.07
PCDHGC3-205ENST00000617641 TRAPPC2LQ9UL33 140 aa14.63□□□□□ -0.07
PCDHGC3-205ENST00000617641 IGF2RP11717 2491 aa14.62□□□□□ -0.07
PCDHGC3-205ENST00000617641 MPPED1O15442 326 aa14.62□□□□□ -0.07
PCDHGC3-205ENST00000617641 PHF1O43189 567 aaPredicted RBP14.62□□□□□ -0.07
PCDHGC3-205ENST00000617641 SPDEFO95238 335 aa14.62□□□□□ -0.07
PCDHGC3-205ENST00000617641 UCNP55089 124 aa14.62□□□□□ -0.07
PCDHGC3-205ENST00000617641 KLF3P57682 345 aaPredicted RBP14.62□□□□□ -0.07
PCDHGC3-205ENST00000617641 LIAT1Q6ZQX7 453 aa14.62□□□□□ -0.07
PCDHGC3-205ENST00000617641 ZNF818PQ6ZRF7 136 aa14.62□□□□□ -0.07
PCDHGC3-205ENST00000617641 SLC51BQ86UW2 128 aa14.62□□□□□ -0.07
PCDHGC3-205ENST00000617641 PRR18Q8N4B5 295 aa14.62□□□□□ -0.07
PCDHGC3-205ENST00000617641 INO80EQ8NBZ0 244 aaPredicted RBP14.62□□□□□ -0.07
PCDHGC3-205ENST00000617641 UBALD1Q8TB05 177 aa14.62□□□□□ -0.07
PCDHGC3-205ENST00000617641 GPHA2Q96T91 129 aa14.62□□□□□ -0.07
PCDHGC3-205ENST00000617641 PCDHB10Q9UN67 800 aa14.62□□□□□ -0.07
PCDHGC3-205ENST00000617641 CHD3Q12873 2000 aaKnown RBP14.62□□□□□ -0.07
PCDHGC3-205ENST00000617641 TRBV6-7A0A0A0MS04 114 aa14.61□□□□□ -0.07
PCDHGC3-205ENST00000617641 LOC105371267A0A1B0GV96 52 aa14.61□□□□□ -0.07
PCDHGC3-205ENST00000617641 C1QTNF9BB2RNN3 333 aa14.61□□□□□ -0.07
PCDHGC3-205ENST00000617641 PTBP3O95758 552 aaKnown RBP14.61□□□□□ -0.07
PCDHGC3-205ENST00000617641 IFNA21P01568 189 aa14.61□□□□□ -0.07
PCDHGC3-205ENST00000617641 LYZL2Q7Z4W2 148 aa14.61□□□□□ -0.07
PCDHGC3-205ENST00000617641 LDLRAD3Q86YD5 345 aa14.61□□□□□ -0.07
PCDHGC3-205ENST00000617641 GAPTQ8N292 157 aa14.61□□□□□ -0.07
PCDHGC3-205ENST00000617641 OR10J5Q8NHC4 309 aa14.61□□□□□ -0.07
PCDHGC3-205ENST00000617641 MSI2Q96DH6 328 aaKnown RBP14.61□□□□□ -0.07
PCDHGC3-205ENST00000617641 RRNAD1Q96FB5 475 aaKnown RBP14.61□□□□□ -0.07
PCDHGC3-205ENST00000617641 CITED4Q96RK1 184 aa14.61□□□□□ -0.07
PCDHGC3-205ENST00000617641 CABLES2Q9BTV7 478 aa14.61□□□□□ -0.07
PCDHGC3-205ENST00000617641 TAAR3PQ9P1P4 343 aa14.61□□□□□ -0.07
PCDHGC3-205ENST00000617641 OR1A1Q9P1Q5 309 aa14.61□□□□□ -0.07
PCDHGC3-205ENST00000617641 KANTRA0A1W2PQU2 76 aa14.61□□□□□ -0.07
PCDHGC3-205ENST00000617641 ANKRD34BA5PLL1 514 aa14.61□□□□□ -0.07
PCDHGC3-205ENST00000617641 C16orf97H3BN30 126 aa14.61□□□□□ -0.07
PCDHGC3-205ENST00000617641 H7C1Q1 480 aa14.61□□□□□ -0.07
PCDHGC3-205ENST00000617641 HSD17B6O14756 317 aa14.61□□□□□ -0.07
PCDHGC3-205ENST00000617641 CD40P25942 277 aa14.61□□□□□ -0.07
PCDHGC3-205ENST00000617641 S100A10P60903 97 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms