RNA–Protein interactions for RNA: ENST00000617456.1

GPC6-202, Transcript of glypican 6, humanhuman

TSL 3 BASIC

Gene GPC6, Length 792 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-202ENST00000617456 INSIG2Q9Y5U4 225 aa7.14□□□□□ -1.27
GPC6-202ENST00000617456 IER3IP1Q9Y5U9 82 aa7.14□□□□□ -1.27
GPC6-202ENST00000617456 C7orf66A4D0T2 115 aa7.13□□□□□ -1.27
GPC6-202ENST00000617456 A4D1N5 150 aa7.13□□□□□ -1.27
GPC6-202ENST00000617456 FAM181BA6NEQ2 426 aa7.13□□□□□ -1.27
GPC6-202ENST00000617456 LRRC30A6NM36 301 aa7.13□□□□□ -1.27
GPC6-202ENST00000617456 IQCF6A8MYZ5 107 aa7.13□□□□□ -1.27
GPC6-202ENST00000617456 SOCS2O14508 198 aa7.13□□□□□ -1.27
GPC6-202ENST00000617456 FABP7O15540 132 aa7.13□□□□□ -1.27
GPC6-202ENST00000617456 HOXA3O43365 443 aaPredicted RBP7.13□□□□□ -1.27
GPC6-202ENST00000617456 ORC5O43913 435 aa7.13□□□□□ -1.27
GPC6-202ENST00000617456 RPLP1P05386 114 aaKnown RBP7.13□□□□□ -1.27
GPC6-202ENST00000617456 LPLP06858 475 aa7.13□□□□□ -1.27
GPC6-202ENST00000617456 ZNF44P15621 663 aa7.13□□□□□ -1.27
GPC6-202ENST00000617456 CD80P33681 288 aa7.13□□□□□ -1.27
GPC6-202ENST00000617456 MDH2P40926 338 aaKnown RBP7.13□□□□□ -1.27
GPC6-202ENST00000617456 MNDAP41218 407 aa7.13□□□□□ -1.27
GPC6-202ENST00000617456 SLC6A9P48067 706 aa7.13□□□□□ -1.27
GPC6-202ENST00000617456 RBMS2Q15434 407 aaKnown RBP7.13□□□□□ -1.27
GPC6-202ENST00000617456 CD276Q5ZPR3 534 aa7.13□□□□□ -1.27
GPC6-202ENST00000617456 ZNF529Q6P280 563 aa7.13□□□□□ -1.27
GPC6-202ENST00000617456 LDLRAD3Q86YD5 345 aa7.13□□□□□ -1.27
GPC6-202ENST00000617456 ZNF573Q86YE8 665 aa7.13□□□□□ -1.27
GPC6-202ENST00000617456 PDZD9Q8IXQ8 264 aa7.13□□□□□ -1.27
GPC6-202ENST00000617456 C1orf87Q8N0U7 546 aa7.13□□□□□ -1.27
GPC6-202ENST00000617456 PUSL1Q8N0Z8 303 aaKnown RBP7.13□□□□□ -1.27
GPC6-202ENST00000617456 OR6V1Q8N148 313 aa7.13□□□□□ -1.27
GPC6-202ENST00000617456 SLC26A10Q8NG04 563 aa7.13□□□□□ -1.27
GPC6-202ENST00000617456 OR4F5Q8NH21 305 aa7.13□□□□□ -1.27
GPC6-202ENST00000617456 TERB2Q8NHR7 220 aa7.13□□□□□ -1.27
GPC6-202ENST00000617456 FCGR1BQ92637 280 aa7.13□□□□□ -1.27
GPC6-202ENST00000617456 CENPNQ96H22 339 aaPredicted RBP7.13□□□□□ -1.27
GPC6-202ENST00000617456 HCAR1Q9BXC0 346 aa7.13□□□□□ -1.27
GPC6-202ENST00000617456 SLC25A32Q9H2D1 315 aa7.13□□□□□ -1.27
GPC6-202ENST00000617456 MAGIXQ9H6Y5 334 aa7.13□□□□□ -1.27
GPC6-202ENST00000617456 PATZ1Q9HBE1 687 aaKnown RBP7.13□□□□□ -1.27
GPC6-202ENST00000617456 MSL2Q9HCI7 577 aa7.13□□□□□ -1.27
GPC6-202ENST00000617456 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP7.13□□□□□ -1.27
GPC6-202ENST00000617456 SLC2A9Q9NRM0 540 aa7.13□□□□□ -1.27
GPC6-202ENST00000617456 GPR173Q9NS66 373 aa7.13□□□□□ -1.27
GPC6-202ENST00000617456 HAO2Q9NYQ3 351 aa7.13□□□□□ -1.27
GPC6-202ENST00000617456 OR5V1Q9UGF6 321 aa7.13□□□□□ -1.27
GPC6-202ENST00000617456 SLC7A11Q9UPY5 501 aa7.13□□□□□ -1.27
GPC6-202ENST00000617456 SLC22A13Q9Y226 551 aa7.13□□□□□ -1.27
GPC6-202ENST00000617456 MMP24Q9Y5R2 645 aa7.13□□□□□ -1.27
GPC6-202ENST00000617456 LHFPL6Q9Y693 200 aa7.13□□□□□ -1.27
GPC6-202ENST00000617456 TRAV40A0A0B4J280 105 aa7.12□□□□□ -1.27
GPC6-202ENST00000617456 A0A1B0GUS0 222 aa7.12□□□□□ -1.27
GPC6-202ENST00000617456 TMEM178BH3BS89 294 aa7.12□□□□□ -1.27
GPC6-202ENST00000617456 H7C1C5 153 aa7.12□□□□□ -1.27
GPC6-202ENST00000617456 ARPC2O15144 300 aa7.12□□□□□ -1.27
GPC6-202ENST00000617456 RER1O15258 196 aa7.12□□□□□ -1.27
GPC6-202ENST00000617456 CYB5R3P00387 301 aaPredicted RBP7.12□□□□□ -1.27
GPC6-202ENST00000617456 MT-ND4LP03901 98 aa7.12□□□□□ -1.27
GPC6-202ENST00000617456 LCN6P62502 163 aa7.12□□□□□ -1.27
GPC6-202ENST00000617456 DLK1P80370 383 aa7.12□□□□□ -1.27
GPC6-202ENST00000617456 MS4A2Q01362 244 aa7.12□□□□□ -1.27
GPC6-202ENST00000617456 EMX1Q04741 257 aaPredicted RBP7.12□□□□□ -1.27
GPC6-202ENST00000617456 PAX8Q06710 450 aa7.12□□□□□ -1.27
GPC6-202ENST00000617456 MALLQ13021 153 aa7.12□□□□□ -1.27
GPC6-202ENST00000617456 PCK2Q16822 640 aa7.12□□□□□ -1.27
GPC6-202ENST00000617456 DEFB112Q30KQ8 113 aa7.12□□□□□ -1.27
GPC6-202ENST00000617456 AKIRIN2Q53H80 203 aa7.12□□□□□ -1.27
GPC6-202ENST00000617456 C6orf141Q5SZD1 244 aa7.12□□□□□ -1.27
GPC6-202ENST00000617456 RNLSQ5VYX0 342 aa7.12□□□□□ -1.27
GPC6-202ENST00000617456 TMEM236Q5W0B7 351 aa7.12□□□□□ -1.27
GPC6-202ENST00000617456 TTC23Q5W5X9 447 aa7.12□□□□□ -1.27
GPC6-202ENST00000617456 OLFML2AQ68BL7 652 aa7.12□□□□□ -1.27
GPC6-202ENST00000617456 SLC18B1Q6NT16 456 aa7.12□□□□□ -1.27
GPC6-202ENST00000617456 CD300LDQ6UXZ3 194 aa7.12□□□□□ -1.27
GPC6-202ENST00000617456 BRD3OSQ6XYD6 125 aa7.12□□□□□ -1.27
GPC6-202ENST00000617456 ZNF620Q6ZNG0 422 aa7.12□□□□□ -1.27
GPC6-202ENST00000617456 Q6ZR03 302 aa7.12□□□□□ -1.27
GPC6-202ENST00000617456 AQP12AQ8IXF9 295 aa7.12□□□□□ -1.27
GPC6-202ENST00000617456 FAM86B1Q8N7N1 296 aa7.12□□□□□ -1.27
GPC6-202ENST00000617456 OR2Z1Q8NG97 314 aa7.12□□□□□ -1.27
GPC6-202ENST00000617456 OR52L1Q8NGH7 329 aa7.12□□□□□ -1.27
GPC6-202ENST00000617456 OR2AJ1Q8NGZ0 328 aa7.12□□□□□ -1.27
GPC6-202ENST00000617456 FAM110DQ8TAY7 271 aaPredicted RBP7.12□□□□□ -1.27
GPC6-202ENST00000617456 Q8TCH9 128 aa7.12□□□□□ -1.27
GPC6-202ENST00000617456 LRTOMTQ8WZ04 291 aa7.12□□□□□ -1.27
GPC6-202ENST00000617456 RORBQ92753 470 aa7.12□□□□□ -1.27
GPC6-202ENST00000617456 SLCO4A1Q96BD0 722 aa7.12□□□□□ -1.27
GPC6-202ENST00000617456 OR2V2Q96R30 315 aa7.12□□□□□ -1.27
GPC6-202ENST00000617456 DDOQ99489 341 aa7.12□□□□□ -1.27
GPC6-202ENST00000617456 CITED1Q99966 193 aa7.12□□□□□ -1.27
GPC6-202ENST00000617456 FAM110AQ9BQ89 295 aa7.12□□□□□ -1.27
GPC6-202ENST00000617456 GCM1Q9NP62 436 aa7.12□□□□□ -1.27
GPC6-202ENST00000617456 TRIM36Q9NQ86 728 aa7.12□□□□□ -1.27
GPC6-202ENST00000617456 TMEM100Q9NV29 134 aa7.12□□□□□ -1.27
GPC6-202ENST00000617456 ZFP30Q9Y2G7 519 aa7.12□□□□□ -1.27
GPC6-202ENST00000617456 A0A1B0GV72 72 aa7.11□□□□□ -1.27
GPC6-202ENST00000617456 CLPSL1A2RUU4 121 aa7.11□□□□□ -1.27
GPC6-202ENST00000617456 OR6C68A6NDL8 312 aa7.11□□□□□ -1.27
GPC6-202ENST00000617456 CXorf65A6NEN9 183 aa7.11□□□□□ -1.27
GPC6-202ENST00000617456 DCTN6O00399 190 aa7.11□□□□□ -1.27
GPC6-202ENST00000617456 TIMM23O14925 209 aa7.11□□□□□ -1.27
GPC6-202ENST00000617456 RAMP3O60896 148 aa7.11□□□□□ -1.27
GPC6-202ENST00000617456 CFDP00746 253 aaPredicted RBP7.11□□□□□ -1.27
GPC6-202ENST00000617456 ANXA3P12429 323 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms