RNA–Protein interactions for RNA: ENST00000617103.4

CLTCL1-209, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,859 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-209ENST00000617103 SCN9AQ15858 1988 aa9.36□□□□□ -0.91
CLTCL1-209ENST00000617103 IGHV3-43A0A0B4J1X8 118 aa9.36□□□□□ -0.91
CLTCL1-209ENST00000617103 TRBV5-5A0A0J9YX44 114 aa9.36□□□□□ -0.91
CLTCL1-209ENST00000617103 SIAH2O43255 324 aa9.36□□□□□ -0.91
CLTCL1-209ENST00000617103 BGLAPP02818 100 aa9.36□□□□□ -0.91
CLTCL1-209ENST00000617103 IGHV3-43DP0DP04 118 aa9.36□□□□□ -0.91
CLTCL1-209ENST00000617103 GABRG2P18507 467 aa9.36□□□□□ -0.91
CLTCL1-209ENST00000617103 TMEM252Q8N6L7 170 aa9.36□□□□□ -0.91
CLTCL1-209ENST00000617103 OR1P1Q8NH06 330 aa9.36□□□□□ -0.91
CLTCL1-209ENST00000617103 NRTNQ99748 197 aa9.36□□□□□ -0.91
CLTCL1-209ENST00000617103 CHST5Q9GZS9 411 aa9.36□□□□□ -0.91
CLTCL1-209ENST00000617103 TUBD1Q9UJT1 453 aa9.36□□□□□ -0.91
CLTCL1-209ENST00000617103 OR2W1Q9Y3N9 320 aa9.36□□□□□ -0.91
CLTCL1-209ENST00000617103 COL16A1Q07092 1604 aaPredicted RBP9.36□□□□□ -0.91
CLTCL1-209ENST00000617103 C1QL1O75973 258 aa9.36□□□□□ -0.91
CLTCL1-209ENST00000617103 CXorf1O96002 111 aa9.36□□□□□ -0.91
CLTCL1-209ENST00000617103 TNFRSF1AP19438 455 aa9.36□□□□□ -0.91
CLTCL1-209ENST00000617103 DRD3P35462 400 aa9.36□□□□□ -0.91
CLTCL1-209ENST00000617103 PRSS12P56730 875 aa9.36□□□□□ -0.91
CLTCL1-209ENST00000617103 HFEQ30201 348 aa9.36□□□□□ -0.91
CLTCL1-209ENST00000617103 C16orf47Q6ZP98 133 aaPredicted RBP9.36□□□□□ -0.91
CLTCL1-209ENST00000617103 ANKRD37Q7Z713 158 aa9.36□□□□□ -0.91
CLTCL1-209ENST00000617103 WDFY1Q8IWB7 410 aa9.36□□□□□ -0.91
CLTCL1-209ENST00000617103 D2HGDHQ8N465 521 aa9.36□□□□□ -0.91
CLTCL1-209ENST00000617103 RHOVQ96L33 236 aa9.36□□□□□ -0.91
CLTCL1-209ENST00000617103 SDHCQ99643 169 aaPredicted RBP9.36□□□□□ -0.91
CLTCL1-209ENST00000617103 DCAF16Q9NXF7 216 aa9.36□□□□□ -0.91
CLTCL1-209ENST00000617103 HSPB8Q9UJY1 196 aa9.36□□□□□ -0.91
CLTCL1-209ENST00000617103 A0A1W2PR80 420 aa9.36□□□□□ -0.91
CLTCL1-209ENST00000617103 CORTO00230 105 aa9.36□□□□□ -0.91
CLTCL1-209ENST00000617103 CYR61O00622 381 aa9.36□□□□□ -0.91
CLTCL1-209ENST00000617103 SMPD2O60906 423 aa9.36□□□□□ -0.91
CLTCL1-209ENST00000617103 SRSF10O75494 262 aaKnown RBP9.36□□□□□ -0.91
CLTCL1-209ENST00000617103 RECKO95980 971 aa9.36□□□□□ -0.91
CLTCL1-209ENST00000617103 APCSP02743 223 aa9.36□□□□□ -0.91
CLTCL1-209ENST00000617103 MMP9P14780 707 aa9.36□□□□□ -0.91
CLTCL1-209ENST00000617103 GLULP15104 373 aa9.36□□□□□ -0.91
CLTCL1-209ENST00000617103 SRP14P37108 136 aaKnown RBP9.36□□□□□ -0.91
CLTCL1-209ENST00000617103 RUNX1Q01196 453 aa9.36□□□□□ -0.91
CLTCL1-209ENST00000617103 MOB3BQ86TA1 216 aa9.36□□□□□ -0.91
CLTCL1-209ENST00000617103 SSMEM1Q8WWF3 244 aa9.36□□□□□ -0.91
CLTCL1-209ENST00000617103 HSPB9Q9BQS6 159 aa9.36□□□□□ -0.91
CLTCL1-209ENST00000617103 KLHDC2Q9Y2U9 406 aa9.36□□□□□ -0.91
CLTCL1-209ENST00000617103 TOGARAM1Q9Y4F4 1720 aa9.35□□□□□ -0.91
CLTCL1-209ENST00000617103 LOC105371267A0A1B0GV96 52 aa9.35□□□□□ -0.91
CLTCL1-209ENST00000617103 A0A1W2PPV9 198 aa9.35□□□□□ -0.91
CLTCL1-209ENST00000617103 ISLRO14498 428 aa9.35□□□□□ -0.91
CLTCL1-209ENST00000617103 SNCGO76070 127 aa9.35□□□□□ -0.91
CLTCL1-209ENST00000617103 HAND1O96004 215 aa9.35□□□□□ -0.91
CLTCL1-209ENST00000617103 ACTL6AO96019 429 aa9.35□□□□□ -0.91
CLTCL1-209ENST00000617103 GALNSP34059 522 aa9.35□□□□□ -0.91
CLTCL1-209ENST00000617103 GNG10P50151 68 aa9.35□□□□□ -0.91
CLTCL1-209ENST00000617103 Q56UQ5 140 aa9.35□□□□□ -0.91
CLTCL1-209ENST00000617103 SLC36A1Q7Z2H8 476 aa9.35□□□□□ -0.91
CLTCL1-209ENST00000617103 RFLNBQ8N5W9 214 aa9.35□□□□□ -0.91
CLTCL1-209ENST00000617103 OR10D3Q8NH80 312 aa9.35□□□□□ -0.91
CLTCL1-209ENST00000617103 ZPLD1Q8TCW7 415 aa9.35□□□□□ -0.91
CLTCL1-209ENST00000617103 HIST1H2BAQ96A08 127 aa9.35□□□□□ -0.91
CLTCL1-209ENST00000617103 AURKAIP1Q9NWT8 199 aaPredicted RBP9.35□□□□□ -0.91
CLTCL1-209ENST00000617103 METTL1Q9UBP6 276 aaKnown RBP9.35□□□□□ -0.91
CLTCL1-209ENST00000617103 TRBV23-1A0A0A0MS06 115 aa9.35□□□□□ -0.91
CLTCL1-209ENST00000617103 MEX3AA1L020 520 aaKnown RBP9.35□□□□□ -0.91
CLTCL1-209ENST00000617103 IFITM10A6NMD0 228 aa9.35□□□□□ -0.91
CLTCL1-209ENST00000617103 SPRY3O43610 288 aa9.35□□□□□ -0.91
CLTCL1-209ENST00000617103 P01737 135 aa9.35□□□□□ -0.91
CLTCL1-209ENST00000617103 PNLIPP16233 465 aa9.35□□□□□ -0.91
CLTCL1-209ENST00000617103 RAC3P60763 192 aa9.35□□□□□ -0.91
CLTCL1-209ENST00000617103 OR4B1Q8NGF8 309 aa9.35□□□□□ -0.91
CLTCL1-209ENST00000617103 ATG101Q9BSB4 218 aa9.35□□□□□ -0.91
CLTCL1-209ENST00000617103 SEBOXQ9HB31 216 aaPredicted RBP9.35□□□□□ -0.91
CLTCL1-209ENST00000617103 CES1P1Q9UKY3 287 aa9.35□□□□□ -0.91
CLTCL1-209ENST00000617103 IGSF23A1L1A6 192 aa9.35□□□□□ -0.91
CLTCL1-209ENST00000617103 NCBP2LA6PVI3 153 aaKnown RBP9.35□□□□□ -0.91
CLTCL1-209ENST00000617103 PRRG2O14669 202 aa9.35□□□□□ -0.91
CLTCL1-209ENST00000617103 NDUFB3O43676 98 aa9.35□□□□□ -0.91
CLTCL1-209ENST00000617103 MT-ND6P03923 174 aa9.35□□□□□ -0.91
CLTCL1-209ENST00000617103 ZNF260Q3ZCT1 412 aa9.35□□□□□ -0.91
CLTCL1-209ENST00000617103 LRRC10Q5BKY1 277 aa9.35□□□□□ -0.91
CLTCL1-209ENST00000617103 ZNF766Q5HY98 468 aa9.35□□□□□ -0.91
CLTCL1-209ENST00000617103 PTCRAQ6ISU1 281 aaPredicted RBP9.35□□□□□ -0.91
CLTCL1-209ENST00000617103 DHRS13Q6UX07 377 aa9.35□□□□□ -0.91
CLTCL1-209ENST00000617103 CARFQ8N187 725 aa9.35□□□□□ -0.91
CLTCL1-209ENST00000617103 GMPPAQ96IJ6 420 aaPredicted RBP9.35□□□□□ -0.91
CLTCL1-209ENST00000617103 ITGB4P16144 1822 aa9.35□□□□□ -0.91
CLTCL1-209ENST00000617103 ORM2P19652 201 aa9.34□□□□□ -0.91
CLTCL1-209ENST00000617103 SRD5A2P31213 254 aa9.34□□□□□ -0.91
CLTCL1-209ENST00000617103 RIGQ13278 110 aa9.34□□□□□ -0.91
CLTCL1-209ENST00000617103 ZBTB34Q8NCN2 500 aa9.34□□□□□ -0.91
CLTCL1-209ENST00000617103 ZNF519Q8TB69 540 aa9.34□□□□□ -0.91
CLTCL1-209ENST00000617103 KCNE5Q9UJ90 142 aa9.34□□□□□ -0.91
CLTCL1-209ENST00000617103 LOXL2Q9Y4K0 774 aa9.34□□□□□ -0.91
CLTCL1-209ENST00000617103 OR2T8A6NH00 312 aa9.34□□□□□ -0.91
CLTCL1-209ENST00000617103 CA11O75493 328 aa9.34□□□□□ -0.91
CLTCL1-209ENST00000617103 MEF2BQ02080 365 aaPredicted RBP9.34□□□□□ -0.91
CLTCL1-209ENST00000617103 WFDC8Q8IUA0 241 aa9.34□□□□□ -0.91
CLTCL1-209ENST00000617103 LRRC75AQ8NAA5 344 aa9.34□□□□□ -0.91
CLTCL1-209ENST00000617103 TMEM116Q8NCL8 245 aa9.34□□□□□ -0.91
CLTCL1-209ENST00000617103 OR2V2Q96R30 315 aa9.34□□□□□ -0.91
CLTCL1-209ENST00000617103 FOXQ1Q9C009 403 aa9.34□□□□□ -0.91
CLTCL1-209ENST00000617103 OR6C3Q9NZP0 311 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms