RNA–Protein interactions for RNA: ENST00000616053.4

TCF4-248, Transcript of transcription factor 4, humanhuman

TSL 5 BASIC

Gene TCF4, Length 8,140 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-248ENST00000616053 OLIG3Q7RTU3 272 aa11.18□□□□□ -0.62
TCF4-248ENST00000616053 SLIT2O94813 1529 aa11.18□□□□□ -0.62
TCF4-248ENST00000616053 AGLP35573 1532 aa11.18□□□□□ -0.62
TCF4-248ENST00000616053 TRAV21A0A0B4J279 112 aa11.18□□□□□ -0.62
TCF4-248ENST00000616053 LEUTXA8MZ59 168 aa11.18□□□□□ -0.62
TCF4-248ENST00000616053 TMEM177Q53S58 311 aa11.18□□□□□ -0.62
TCF4-248ENST00000616053 KIR2DL4Q99706 377 aa11.18□□□□□ -0.62
TCF4-248ENST00000616053 FER1L4A9Z1Z3 1794 aa11.18□□□□□ -0.62
TCF4-248ENST00000616053 FTH1P19P0C7X4 201 aa11.18□□□□□ -0.62
TCF4-248ENST00000616053 CD68P34810 354 aaPredicted RBP11.18□□□□□ -0.62
TCF4-248ENST00000616053 GZMKP49863 264 aa11.18□□□□□ -0.62
TCF4-248ENST00000616053 RAC3P60763 192 aa11.18□□□□□ -0.62
TCF4-248ENST00000616053 RELQ04864 619 aaPredicted RBP11.18□□□□□ -0.62
TCF4-248ENST00000616053 METTL1Q9UBP6 276 aaKnown RBP11.18□□□□□ -0.62
TCF4-248ENST00000616053 RNF115Q9Y4L5 304 aa11.18□□□□□ -0.62
TCF4-248ENST00000616053 ZNF737O75373 536 aa11.18□□□□□ -0.62
TCF4-248ENST00000616053 BGLAPP02818 100 aa11.18□□□□□ -0.62
TCF4-248ENST00000616053 HOXD3P31249 432 aaPredicted RBP11.18□□□□□ -0.62
TCF4-248ENST00000616053 CX3CL1P78423 397 aa11.18□□□□□ -0.62
TCF4-248ENST00000616053 B3GNT8Q7Z7M8 397 aa11.18□□□□□ -0.62
TCF4-248ENST00000616053 RAB40CQ96S21 281 aa11.18□□□□□ -0.62
TCF4-248ENST00000616053 CABIN1Q9Y6J0 2220 aa11.18□□□□□ -0.62
TCF4-248ENST00000616053 KIF13AQ9H1H9 1805 aa11.18□□□□□ -0.62
TCF4-248ENST00000616053 LOC105371242A0A075B767 164 aa11.18□□□□□ -0.62
TCF4-248ENST00000616053 SRD5A2P31213 254 aa11.18□□□□□ -0.62
TCF4-248ENST00000616053 RPL29P47914 159 aaKnown RBP11.18□□□□□ -0.62
TCF4-248ENST00000616053 SPCS2Q15005 226 aa11.18□□□□□ -0.62
TCF4-248ENST00000616053 BPIFA4PQ86YQ2 179 aa11.18□□□□□ -0.62
TCF4-248ENST00000616053 C10orf126Q8N4M7 172 aa11.18□□□□□ -0.62
TCF4-248ENST00000616053 SMIM14Q96QK8 99 aa11.18□□□□□ -0.62
TCF4-248ENST00000616053 SIGLEC11Q96RL6 698 aa11.18□□□□□ -0.62
TCF4-248ENST00000616053 TCRBV4S1A1TA0A5B7 111 aa11.18□□□□□ -0.62
TCF4-248ENST00000616053 PAPPA-AS1Q5QFB9 102 aa11.18□□□□□ -0.62
TCF4-248ENST00000616053 MBTPS2O43462 519 aa11.17□□□□□ -0.62
TCF4-248ENST00000616053 FAM168AQ92567 244 aa11.17□□□□□ -0.62
TCF4-248ENST00000616053 OR10G4Q8NGN3 311 aa11.17□□□□□ -0.62
TCF4-248ENST00000616053 OR10G9Q8NGN4 311 aa11.17□□□□□ -0.62
TCF4-248ENST00000616053 OR10G7Q8NGN6 311 aa11.17□□□□□ -0.62
TCF4-248ENST00000616053 ADAMTS17Q8TE56 1095 aa11.17□□□□□ -0.62
TCF4-248ENST00000616053 HAPLN2Q9GZV7 340 aa11.17□□□□□ -0.62
TCF4-248ENST00000616053 ZNF385DQ9H6B1 395 aa11.17□□□□□ -0.62
TCF4-248ENST00000616053 MED1Q15648 1581 aaPredicted RBP11.17□□□□□ -0.62
TCF4-248ENST00000616053 NME1P15531 152 aaKnown RBP11.17□□□□□ -0.62
TCF4-248ENST00000616053 C3orf36Q3SXR2 165 aa11.17□□□□□ -0.62
TCF4-248ENST00000616053 OR13F1Q8NGS4 319 aa11.17□□□□□ -0.62
TCF4-248ENST00000616053 NKX6-2Q9C056 277 aaPredicted RBP11.17□□□□□ -0.62
TCF4-248ENST00000616053 CLPSP04118 112 aa11.17□□□□□ -0.62
TCF4-248ENST00000616053 HAPLN4Q86UW8 402 aa11.17□□□□□ -0.62
TCF4-248ENST00000616053 EEF1AKMT3Q96AZ1 226 aa11.17□□□□□ -0.62
TCF4-248ENST00000616053 ZFP30Q9Y2G7 519 aa11.17□□□□□ -0.62
TCF4-248ENST00000616053 TBL2Q9Y4P3 447 aaKnown RBP11.17□□□□□ -0.62
TCF4-248ENST00000616053 TINAGQ9UJW2 476 aa11.17□□□□□ -0.62
TCF4-248ENST00000616053 LAX1Q8IWV1 398 aa11.17□□□□□ -0.62
TCF4-248ENST00000616053 SSMEM1Q8WWF3 244 aa11.17□□□□□ -0.62
TCF4-248ENST00000616053 GZMHP20718 246 aa11.17□□□□□ -0.62
TCF4-248ENST00000616053 IGHV3-72A0A0B4J1Y9 119 aa11.16□□□□□ -0.62
TCF4-248ENST00000616053 TMEM241Q24JQ0 296 aa11.16□□□□□ -0.62
TCF4-248ENST00000616053 NANOGP1Q8N7R0 232 aa11.16□□□□□ -0.62
TCF4-248ENST00000616053 LRRC75AQ8NAA5 344 aa11.16□□□□□ -0.62
TCF4-248ENST00000616053 C12orf57Q99622 126 aa11.16□□□□□ -0.62
TCF4-248ENST00000616053 WNT10AQ9GZT5 417 aa11.16□□□□□ -0.62
TCF4-248ENST00000616053 MIOXQ9UGB7 285 aa11.16□□□□□ -0.62
TCF4-248ENST00000616053 H7C1H1 209 aa11.16□□□□□ -0.62
TCF4-248ENST00000616053 CD8AP01732 235 aa11.16□□□□□ -0.62
TCF4-248ENST00000616053 GABRB1P18505 474 aa11.16□□□□□ -0.62
TCF4-248ENST00000616053 VDAC2P45880 294 aaPredicted RBP11.16□□□□□ -0.62
TCF4-248ENST00000616053 PNLIPRP3Q17RR3 467 aa11.16□□□□□ -0.62
TCF4-248ENST00000616053 COX20Q5RI15 118 aa11.16□□□□□ -0.62
TCF4-248ENST00000616053 PMS2CLQ68D20 193 aa11.16□□□□□ -0.62
TCF4-248ENST00000616053 ZDHHC18Q9NUE0 388 aa11.16□□□□□ -0.62
TCF4-248ENST00000616053 PIK3C2BO00750 1634 aa11.16□□□□□ -0.62
TCF4-248ENST00000616053 PGA3P0DJD8 388 aa11.16□□□□□ -0.62
TCF4-248ENST00000616053 SPINK2P20155 84 aa11.16□□□□□ -0.62
TCF4-248ENST00000616053 SLC6A1P30531 599 aa11.16□□□□□ -0.62
TCF4-248ENST00000616053 RPS27P42677 84 aaKnown RBP11.16□□□□□ -0.62
TCF4-248ENST00000616053 EFNB1P98172 346 aa11.16□□□□□ -0.62
TCF4-248ENST00000616053 HIST1H1AQ02539 215 aaPredicted RBP11.16□□□□□ -0.62
TCF4-248ENST00000616053 GUCA2AQ02747 115 aa11.16□□□□□ -0.62
TCF4-248ENST00000616053 GGTA1PQ4G0N0 100 aa11.16□□□□□ -0.62
TCF4-248ENST00000616053 TEAD3Q99594 435 aa11.16□□□□□ -0.62
TCF4-248ENST00000616053 GPA33Q99795 319 aa11.16□□□□□ -0.62
TCF4-248ENST00000616053 TMPRSS13Q9BYE2 586 aa11.16□□□□□ -0.62
TCF4-248ENST00000616053 MKRN2Q9H000 416 aaKnown RBP11.16□□□□□ -0.62
TCF4-248ENST00000616053 KLK15Q9H2R5 256 aa11.16□□□□□ -0.62
TCF4-248ENST00000616053 SIRT7Q9NRC8 400 aa11.16□□□□□ -0.62
TCF4-248ENST00000616053 A0A087WUJ7 227 aa11.16□□□□□ -0.62
TCF4-248ENST00000616053 PRRT4C9JH25 899 aa11.16□□□□□ -0.62
TCF4-248ENST00000616053 SP6Q3SY56 376 aa11.16□□□□□ -0.62
TCF4-248ENST00000616053 PGA4P0DJD7 388 aa11.16□□□□□ -0.62
TCF4-248ENST00000616053 PGA5P0DJD9 388 aa11.16□□□□□ -0.62
TCF4-248ENST00000616053 FGF5P12034 268 aa11.16□□□□□ -0.62
TCF4-248ENST00000616053 NPBWR2P48146 333 aa11.16□□□□□ -0.62
TCF4-248ENST00000616053 CDC20Q12834 499 aa11.16□□□□□ -0.62
TCF4-248ENST00000616053 PCOLCEQ15113 449 aa11.16□□□□□ -0.62
TCF4-248ENST00000616053 OR52B4Q8NGK2 314 aa11.16□□□□□ -0.62
TCF4-248ENST00000616053 GABRA6Q16445 453 aa11.16□□□□□ -0.62
TCF4-248ENST00000616053 MPC1Q9Y5U8 109 aa11.16□□□□□ -0.62
TCF4-248ENST00000616053 CACNA1DQ01668 2161 aa11.16□□□□□ -0.62
TCF4-248ENST00000616053 SPTY2D1-AS1A0A0U1RR47 76 aa11.15□□□□□ -0.62
TCF4-248ENST00000616053 DAOP14920 347 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms