RNA–Protein interactions for RNA: ENST00000615665.4

SSBP2-220, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 5 BASIC

Gene SSBP2, Length 4,465 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-220ENST00000615665 PDLIM3Q53GG5 364 aaPredicted RBP12.14□□□□□ -0.47
SSBP2-220ENST00000615665 ZNF488Q96MN9 340 aa12.14□□□□□ -0.47
SSBP2-220ENST00000615665 RSRP1Q9BUV0 290 aa12.14□□□□□ -0.47
SSBP2-220ENST00000615665 POMT1Q9Y6A1 747 aa12.14□□□□□ -0.47
SSBP2-220ENST00000615665 ABCA1O95477 2261 aa12.14□□□□□ -0.47
SSBP2-220ENST00000615665 C17orf112F2Z3M2 114 aa12.14□□□□□ -0.47
SSBP2-220ENST00000615665 TLE1Q04724 770 aa12.14□□□□□ -0.47
SSBP2-220ENST00000615665 FOXJ2Q9P0K8 574 aa12.14□□□□□ -0.47
SSBP2-220ENST00000615665 RNF222A6NCQ9 220 aa12.13□□□□□ -0.47
SSBP2-220ENST00000615665 F12P00748 615 aaPredicted RBP12.13□□□□□ -0.47
SSBP2-220ENST00000615665 C17orf78Q8N4C9 275 aa12.13□□□□□ -0.47
SSBP2-220ENST00000615665 POC1AQ8NBT0 407 aa12.13□□□□□ -0.47
SSBP2-220ENST00000615665 NECAP1Q8NC96 275 aa12.13□□□□□ -0.47
SSBP2-220ENST00000615665 SPTBN1Q01082 2364 aaKnown RBP12.13□□□□□ -0.47
SSBP2-220ENST00000615665 hCG_38984A0A1B0GV85 526 aa12.13□□□□□ -0.47
SSBP2-220ENST00000615665 DAOP14920 347 aa12.13□□□□□ -0.47
SSBP2-220ENST00000615665 KCNJ3P48549 501 aa12.13□□□□□ -0.47
SSBP2-220ENST00000615665 ADIRFQ15847 76 aa12.13□□□□□ -0.47
SSBP2-220ENST00000615665 CST9LP1Q5W188 147 aa12.13□□□□□ -0.47
SSBP2-220ENST00000615665 LHFPL5Q8TAF8 219 aa12.13□□□□□ -0.47
SSBP2-220ENST00000615665 RXFP4Q8TDU9 374 aa12.13□□□□□ -0.47
SSBP2-220ENST00000615665 ADAMTS17Q8TE56 1095 aa12.13□□□□□ -0.47
SSBP2-220ENST00000615665 ISOC2Q96AB3 205 aa12.13□□□□□ -0.47
SSBP2-220ENST00000615665 MOB3AQ96BX8 217 aa12.13□□□□□ -0.47
SSBP2-220ENST00000615665 RAB40CQ96S21 281 aa12.13□□□□□ -0.47
SSBP2-220ENST00000615665 GLRX2Q9NS18 164 aa12.13□□□□□ -0.47
SSBP2-220ENST00000615665 RTBDNQ9BSG5 229 aaPredicted RBP12.13□□□□□ -0.47
SSBP2-220ENST00000615665 HEYLQ9NQ87 328 aaPredicted RBP12.13□□□□□ -0.47
SSBP2-220ENST00000615665 CACNG5Q9UF02 275 aa12.13□□□□□ -0.47
SSBP2-220ENST00000615665 FAM90A10PA6NDY2 464 aa12.13□□□□□ -0.47
SSBP2-220ENST00000615665 BTBD17A6NE02 478 aa12.13□□□□□ -0.47
SSBP2-220ENST00000615665 FAM90A18PA6NE21 464 aa12.13□□□□□ -0.47
SSBP2-220ENST00000615665 FAM90A16PA6NEW6 464 aa12.13□□□□□ -0.47
SSBP2-220ENST00000615665 FAM90A20PA6NIJ5 464 aa12.13□□□□□ -0.47
SSBP2-220ENST00000615665 FAM90A8PA6NJQ4 464 aa12.13□□□□□ -0.47
SSBP2-220ENST00000615665 FAM90A7PA6NKC0 464 aa12.13□□□□□ -0.47
SSBP2-220ENST00000615665 FAM90A22PA8MWA6 464 aa12.13□□□□□ -0.47
SSBP2-220ENST00000615665 FAM90A12PA8MX19 464 aa12.13□□□□□ -0.47
SSBP2-220ENST00000615665 FAM90A5PA8MXJ8 464 aa12.13□□□□□ -0.47
SSBP2-220ENST00000615665 FAM90A23PA8MXZ1 464 aa12.13□□□□□ -0.47
SSBP2-220ENST00000615665 FAM90A15PP0C7V4 464 aa12.13□□□□□ -0.47
SSBP2-220ENST00000615665 FAM90A13PP0C7W8 464 aa12.13□□□□□ -0.47
SSBP2-220ENST00000615665 FAM90A14PP0C7W9 464 aa12.13□□□□□ -0.47
SSBP2-220ENST00000615665 FAM90A24PP0C7X0 464 aa12.13□□□□□ -0.47
SSBP2-220ENST00000615665 LOXL4Q96JB6 756 aa12.13□□□□□ -0.47
SSBP2-220ENST00000615665 SIGLEC12Q96PQ1 595 aa12.13□□□□□ -0.47
SSBP2-220ENST00000615665 SEC11CQ9BY50 192 aa12.13□□□□□ -0.47
SSBP2-220ENST00000615665 SERTAD4Q9NUC0 356 aa12.13□□□□□ -0.47
SSBP2-220ENST00000615665 IL17BQ9UHF5 180 aa12.13□□□□□ -0.47
SSBP2-220ENST00000615665 NBASA2RRP1 2371 aa12.12□□□□□ -0.47
SSBP2-220ENST00000615665 CLEC18AA5D8T8 446 aa12.12□□□□□ -0.47
SSBP2-220ENST00000615665 CDIPTO14735 213 aa12.12□□□□□ -0.47
SSBP2-220ENST00000615665 RRP8O43159 456 aaKnown RBP12.12□□□□□ -0.47
SSBP2-220ENST00000615665 GPR12P47775 334 aa12.12□□□□□ -0.47
SSBP2-220ENST00000615665 NPBWR2P48146 333 aa12.12□□□□□ -0.47
SSBP2-220ENST00000615665 HLA-DRB3P79483 266 aa12.12□□□□□ -0.47
SSBP2-220ENST00000615665 LINC00596Q86U02 117 aa12.12□□□□□ -0.47
SSBP2-220ENST00000615665 FAM89BQ8N5H3 189 aa12.12□□□□□ -0.47
SSBP2-220ENST00000615665 CLEC18CQ8NCF0 446 aa12.12□□□□□ -0.47
SSBP2-220ENST00000615665 WNT2BQ93097 391 aa12.12□□□□□ -0.47
SSBP2-220ENST00000615665 TMEM45BQ96B21 275 aa12.12□□□□□ -0.47
SSBP2-220ENST00000615665 ESRP2Q9H6T0 727 aaKnown RBP12.12□□□□□ -0.47
SSBP2-220ENST00000615665 ZNF703Q9H7S9 590 aaPredicted RBP12.12□□□□□ -0.47
SSBP2-220ENST00000615665 LNP1A1A4G5 178 aa12.12□□□□□ -0.47
SSBP2-220ENST00000615665 M0R1B8 84 aa12.12□□□□□ -0.47
SSBP2-220ENST00000615665 GAPDHP04406 335 aaKnown RBP12.12□□□□□ -0.47
SSBP2-220ENST00000615665 CELA3AP09093 270 aa12.12□□□□□ -0.47
SSBP2-220ENST00000615665 SP9P0CG40 484 aa12.12□□□□□ -0.47
SSBP2-220ENST00000615665 HKR1P10072 659 aa12.12□□□□□ -0.47
SSBP2-220ENST00000615665 EWSR1Q01844 656 aaKnown RBP eCLIP12.12□□□□□ -0.472e-8■■■■■ 38.4
SSBP2-220ENST00000615665 TMEM267Q0VDI3 215 aaPredicted RBP12.12□□□□□ -0.47
SSBP2-220ENST00000615665 ZNF816Q0VGE8 651 aaPredicted RBP12.12□□□□□ -0.47
SSBP2-220ENST00000615665 PRAMEF5Q5TYX0 476 aa12.12□□□□□ -0.47
SSBP2-220ENST00000615665 PRAMEF6Q5VXH4 476 aa12.12□□□□□ -0.47
SSBP2-220ENST00000615665 ZIC4Q8N9L1 334 aa12.12□□□□□ -0.47
SSBP2-220ENST00000615665 PARP11Q9NR21 331 aa12.12□□□□□ -0.47
SSBP2-220ENST00000615665 PRSS50Q9UI38 385 aa12.12□□□□□ -0.47
SSBP2-220ENST00000615665 PHF3Q92576 2039 aaKnown RBP12.12□□□□□ -0.47
SSBP2-220ENST00000615665 MBPP02686 304 aaPredicted RBP12.12□□□□□ -0.47
SSBP2-220ENST00000615665 ZNF883P0CG24 379 aa12.12□□□□□ -0.47
SSBP2-220ENST00000615665 HLA-GP17693 338 aa12.12□□□□□ -0.47
SSBP2-220ENST00000615665 FABP9Q0Z7S8 132 aa12.12□□□□□ -0.47
SSBP2-220ENST00000615665 TIPARPQ7Z3E1 657 aaKnown RBP12.12□□□□□ -0.47
SSBP2-220ENST00000615665 AP1S3Q96PC3 154 aa12.12□□□□□ -0.47
SSBP2-220ENST00000615665 PNRC2Q9NPJ4 139 aaKnown RBP12.12□□□□□ -0.47
SSBP2-220ENST00000615665 FZR1Q9UM11 496 aa12.12□□□□□ -0.47
SSBP2-220ENST00000615665 OR2W1Q9Y3N9 320 aa12.12□□□□□ -0.47
SSBP2-220ENST00000615665 KRASP01116 189 aa12.11□□□□□ -0.47
SSBP2-220ENST00000615665 COX5BP10606 129 aa12.11□□□□□ -0.47
SSBP2-220ENST00000615665 TAS2R30P59541 319 aa12.11□□□□□ -0.47
SSBP2-220ENST00000615665 H3F3AP84243 136 aa12.11□□□□□ -0.47
SSBP2-220ENST00000615665 C9orf152Q5JTZ5 239 aa12.11□□□□□ -0.47
SSBP2-220ENST00000615665 FAM24BQ8N5W8 94 aa12.11□□□□□ -0.47
SSBP2-220ENST00000615665 ERGIC1Q969X5 290 aa12.11□□□□□ -0.47
SSBP2-220ENST00000615665 LINC00470Q9BZP3 86 aa12.11□□□□□ -0.47
SSBP2-220ENST00000615665 HIPK2Q9H2X6 1198 aa12.11□□□□□ -0.47
SSBP2-220ENST00000615665 TRAV39A0A0B4J263 110 aa12.11□□□□□ -0.47
SSBP2-220ENST00000615665 SCTP09683 121 aa12.11□□□□□ -0.47
SSBP2-220ENST00000615665 SEC11BP0C7V7 166 aa12.11□□□□□ -0.47
SSBP2-220ENST00000615665 HOXA1P49639 335 aaPredicted RBP12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms