RNA–Protein interactions for RNA: ENST00000613899.4

FAM228B-208, Transcript of family with sequence similarity 228 member B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene FAM228B, Length 1,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228B-208ENST00000613899 TAS2R43P59537 309 aa18.19■□□□□ 0.5
FAM228B-208ENST00000613899 ADARB1P78563 741 aaKnown RBP18.19■□□□□ 0.5
FAM228B-208ENST00000613899 TMEM95Q3KNT9 176 aa18.19■□□□□ 0.5
FAM228B-208ENST00000613899 Q499Y3 187 aa18.19■□□□□ 0.5
FAM228B-208ENST00000613899 DMKNQ6E0U4 476 aaPredicted RBP18.19■□□□□ 0.5
FAM228B-208ENST00000613899 Q6ZS46 218 aa18.19■□□□□ 0.5
FAM228B-208ENST00000613899 OR13C5Q8NGS8 318 aa18.19■□□□□ 0.5
FAM228B-208ENST00000613899 PLPPR1Q8TBJ4 325 aa18.19■□□□□ 0.5
FAM228B-208ENST00000613899 DPCDQ9BVM2 203 aaPredicted RBP18.19■□□□□ 0.5
FAM228B-208ENST00000613899 IDI2-AS1Q9NZ38 188 aa18.19■□□□□ 0.5
FAM228B-208ENST00000613899 ING4Q9UNL4 249 aa18.19■□□□□ 0.5
FAM228B-208ENST00000613899 LY6LH3BQJ8 138 aa18.18■□□□□ 0.5
FAM228B-208ENST00000613899 OR7C1O76099 320 aaPredicted RBP18.18■□□□□ 0.5
FAM228B-208ENST00000613899 SERPINA2P20848 420 aa18.18■□□□□ 0.5
FAM228B-208ENST00000613899 LYG1Q8N1E2 194 aa18.18■□□□□ 0.5
FAM228B-208ENST00000613899 SUMF2Q8NBJ7 301 aa18.18■□□□□ 0.5
FAM228B-208ENST00000613899 OR4F17Q8NGA8 305 aa18.18■□□□□ 0.5
FAM228B-208ENST00000613899 OR10A7Q8NGE5 316 aa18.18■□□□□ 0.5
FAM228B-208ENST00000613899 MRGPRDQ8TDS7 321 aa18.18■□□□□ 0.5
FAM228B-208ENST00000613899 TOMM40LQ969M1 308 aa18.18■□□□□ 0.5
FAM228B-208ENST00000613899 RPEQ96AT9 228 aa18.18■□□□□ 0.5
FAM228B-208ENST00000613899 RBM14Q96PK6 669 aaKnown RBP18.18■□□□□ 0.5
FAM228B-208ENST00000613899 OR4F4Q96R69 305 aa18.18■□□□□ 0.5
FAM228B-208ENST00000613899 ZNF184Q99676 751 aaPredicted RBP18.18■□□□□ 0.5
FAM228B-208ENST00000613899 CITED2Q99967 270 aaPredicted RBP18.18■□□□□ 0.5
FAM228B-208ENST00000613899 OCSTAMPQ9BR26 566 aa18.18■□□□□ 0.5
FAM228B-208ENST00000613899 EFCAB10A6NFE3 127 aa18.17■□□□□ 0.5
FAM228B-208ENST00000613899 NPIPB11E5RHQ5 1161 aa18.17■□□□□ 0.5
FAM228B-208ENST00000613899 J3QR06 171 aa18.17■□□□□ 0.5
FAM228B-208ENST00000613899 IGFBP3P17936 291 aaPredicted RBP18.17■□□□□ 0.5
FAM228B-208ENST00000613899 FSTP19883 344 aa18.17■□□□□ 0.5
FAM228B-208ENST00000613899 ST3GAL4Q11206 333 aa18.17■□□□□ 0.5
FAM228B-208ENST00000613899 MPV17LQ2QL34 196 aa18.17■□□□□ 0.5
FAM228B-208ENST00000613899 C8orf59Q8N0T1 100 aaPredicted RBP18.17■□□□□ 0.5
FAM228B-208ENST00000613899 GGHQ92820 318 aa18.17■□□□□ 0.5
FAM228B-208ENST00000613899 PGLYRP3Q96LB9 341 aa18.17■□□□□ 0.5
FAM228B-208ENST00000613899 CNOT2Q9NZN8 540 aaKnown RBP18.17■□□□□ 0.5
FAM228B-208ENST00000613899 TGP01266 2768 aa18.17■□□□□ 0.5
FAM228B-208ENST00000613899 M0QZK8 103 aa18.16■□□□□ 0.5
FAM228B-208ENST00000613899 GPX5O75715 221 aa18.16■□□□□ 0.5
FAM228B-208ENST00000613899 CAPGP40121 348 aa18.16■□□□□ 0.5
FAM228B-208ENST00000613899 GPR176Q14439 515 aa18.16■□□□□ 0.5
FAM228B-208ENST00000613899 UTF1Q5T230 341 aa18.16■□□□□ 0.5
FAM228B-208ENST00000613899 SLC16A12Q6ZSM3 486 aa18.16■□□□□ 0.5
FAM228B-208ENST00000613899 ZFP41Q8N8Y5 198 aa18.16■□□□□ 0.5
FAM228B-208ENST00000613899 ZNF485Q8NCK3 441 aa18.16■□□□□ 0.5
FAM228B-208ENST00000613899 ORAI1Q96D31 301 aa18.16■□□□□ 0.5
FAM228B-208ENST00000613899 R3HDM4Q96D70 268 aa18.16■□□□□ 0.5
FAM228B-208ENST00000613899 TMEM30CPA0ZSE6 113 aa18.15■□□□□ 0.5
FAM228B-208ENST00000613899 G3V4G9 280 aa18.15■□□□□ 0.5
FAM228B-208ENST00000613899 GEMIN2O14893 280 aaKnown RBP18.15■□□□□ 0.5
FAM228B-208ENST00000613899 XPNPEP2O43895 674 aa18.15■□□□□ 0.5
FAM228B-208ENST00000613899 FAM106CPP0CH98 169 aa18.15■□□□□ 0.5
FAM228B-208ENST00000613899 GTF2F2P13984 249 aa18.15■□□□□ 0.5
FAM228B-208ENST00000613899 SSTR5P35346 364 aa18.15■□□□□ 0.5
FAM228B-208ENST00000613899 RPS11P62280 158 aaKnown RBP eCLIP18.15■□□□□ 0.5
FAM228B-208ENST00000613899 MADCAM1Q13477 382 aa18.15■□□□□ 0.5
FAM228B-208ENST00000613899 ABCA11PQ4W5N1 156 aa18.15■□□□□ 0.5
FAM228B-208ENST00000613899 PSG11Q9UQ72 335 aa18.15■□□□□ 0.5
FAM228B-208ENST00000613899 PRKDCP78527 4128 aaKnown RBP18.14■□□□□ 0.49
FAM228B-208ENST00000613899 MYL12BO14950 172 aa18.14■□□□□ 0.49
FAM228B-208ENST00000613899 GZMHP20718 246 aa18.14■□□□□ 0.49
FAM228B-208ENST00000613899 LTC4SQ16873 150 aa18.14■□□□□ 0.49
FAM228B-208ENST00000613899 SLC22A6Q4U2R8 563 aa18.14■□□□□ 0.49
FAM228B-208ENST00000613899 ATAD3CQ5T2N8 411 aa18.14■□□□□ 0.49
FAM228B-208ENST00000613899 SAMD5Q5TGI4 173 aa18.14■□□□□ 0.49
FAM228B-208ENST00000613899 THNSL2Q86YJ6 484 aa18.14■□□□□ 0.49
FAM228B-208ENST00000613899 OR5AU1Q8NGC0 362 aa18.14■□□□□ 0.49
FAM228B-208ENST00000613899 RFESDQ8TAC1 157 aa18.14■□□□□ 0.49
FAM228B-208ENST00000613899 LEAP2Q969E1 77 aa18.14■□□□□ 0.49
FAM228B-208ENST00000613899 OR14A2Q96R54 314 aa18.14■□□□□ 0.49
FAM228B-208ENST00000613899 ZNF581Q9P0T4 197 aa18.14■□□□□ 0.49
FAM228B-208ENST00000613899 TRAV8-7A0A075B6U6 113 aa18.13■□□□□ 0.49
FAM228B-208ENST00000613899 MAGEA13PA6NCF6 341 aa18.13■□□□□ 0.49
FAM228B-208ENST00000613899 ADARB2-AS1A8MUL3 147 aa18.13■□□□□ 0.49
FAM228B-208ENST00000613899 IGHV3-7P01780 117 aa18.13■□□□□ 0.49
FAM228B-208ENST00000613899 LPLP06858 475 aa18.13■□□□□ 0.49
FAM228B-208ENST00000613899 GNAO1P09471 354 aa18.13■□□□□ 0.49
FAM228B-208ENST00000613899 GNG10P50151 68 aa18.13■□□□□ 0.49
FAM228B-208ENST00000613899 RAB7AP51149 207 aa18.13■□□□□ 0.49
FAM228B-208ENST00000613899 BEAN1Q3B7T3 259 aa18.13■□□□□ 0.49
FAM228B-208ENST00000613899 FBLN7Q53RD9 439 aa18.13■□□□□ 0.49
FAM228B-208ENST00000613899 OGFRL1Q5TC84 451 aaPredicted RBP18.13■□□□□ 0.49
FAM228B-208ENST00000613899 AHSA2Q719I0 299 aa18.13■□□□□ 0.49
FAM228B-208ENST00000613899 CENPVQ7Z7K6 275 aaPredicted RBP18.13■□□□□ 0.49
FAM228B-208ENST00000613899 STX19Q8N4C7 294 aa18.13■□□□□ 0.49
FAM228B-208ENST00000613899 JAGN1Q8N5M9 183 aa18.13■□□□□ 0.49
FAM228B-208ENST00000613899 NEK7Q8TDX7 302 aa18.13■□□□□ 0.49
FAM228B-208ENST00000613899 THRSPQ92748 146 aa18.13■□□□□ 0.49
FAM228B-208ENST00000613899 VCXQ9H320 206 aa18.13■□□□□ 0.49
FAM228B-208ENST00000613899 SPACA1Q9HBV2 294 aa18.13■□□□□ 0.49
FAM228B-208ENST00000613899 MOB4Q9Y3A3 225 aa18.13■□□□□ 0.49
FAM228B-208ENST00000613899 TRBV5-7A0A0A0MS05 114 aa18.12■□□□□ 0.49
FAM228B-208ENST00000613899 PNMA8CA0A1B0GUJ8 204 aa18.12■□□□□ 0.49
FAM228B-208ENST00000613899 FAM90A18PA6NE21 464 aa18.12■□□□□ 0.49
FAM228B-208ENST00000613899 FAM90A16PA6NEW6 464 aa18.12■□□□□ 0.49
FAM228B-208ENST00000613899 FAM90A20PA6NIJ5 464 aa18.12■□□□□ 0.49
FAM228B-208ENST00000613899 FAM90A9PA6NNJ1 464 aa18.12■□□□□ 0.49
FAM228B-208ENST00000613899 FAM90A12PA8MX19 464 aa18.12■□□□□ 0.49
FAM228B-208ENST00000613899 FAM90A5PA8MXJ8 464 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms