RNA–Protein interactions for RNA: ENST00000613642.4

CCL16-206, Transcript of C-C motif chemokine ligand 16, humanhuman

TSL 3

Gene CCL16, Length 687 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL16-206ENST00000613642 DET1Q7L5Y6 550 aa4.78□□□□□ -1.64
CCL16-206ENST00000613642 COMMD6Q7Z4G1 85 aa4.78□□□□□ -1.64
CCL16-206ENST00000613642 PRRT2Q7Z6L0 340 aaPredicted RBP4.78□□□□□ -1.64
CCL16-206ENST00000613642 LRP11Q86VZ4 500 aa4.78□□□□□ -1.64
CCL16-206ENST00000613642 CDC20BQ86Y33 519 aa4.78□□□□□ -1.64
CCL16-206ENST00000613642 ZNF595Q8IYB9 648 aa4.78□□□□□ -1.64
CCL16-206ENST00000613642 GPR135Q8IZ08 494 aa4.78□□□□□ -1.64
CCL16-206ENST00000613642 BLIDQ8IZY5 108 aa4.78□□□□□ -1.64
CCL16-206ENST00000613642 KIR3DL3Q8N743 410 aa4.78□□□□□ -1.64
CCL16-206ENST00000613642 ADAD2Q8NCV1 583 aaKnown RBP4.78□□□□□ -1.64
CCL16-206ENST00000613642 TMEM170AQ8WVE7 144 aa4.78□□□□□ -1.64
CCL16-206ENST00000613642 MBD3L1Q8WWY6 194 aa4.78□□□□□ -1.64
CCL16-206ENST00000613642 BAALCQ8WXS3 180 aa4.78□□□□□ -1.64
CCL16-206ENST00000613642 SDSLQ96GA7 329 aa4.78□□□□□ -1.64
CCL16-206ENST00000613642 AP1S3Q96PC3 154 aa4.78□□□□□ -1.64
CCL16-206ENST00000613642 SNRNP25Q9BV90 132 aaKnown RBP4.78□□□□□ -1.64
CCL16-206ENST00000613642 MRIQ9BWK5 157 aa4.78□□□□□ -1.64
CCL16-206ENST00000613642 VN1R3Q9BXE9 311 aa4.78□□□□□ -1.64
CCL16-206ENST00000613642 NPFFR1Q9GZQ6 430 aa4.78□□□□□ -1.64
CCL16-206ENST00000613642 WDR61Q9GZS3 305 aaKnown RBP4.78□□□□□ -1.64
CCL16-206ENST00000613642 SLC35B3Q9H1N7 401 aa4.78□□□□□ -1.64
CCL16-206ENST00000613642 OR2D2Q9H210 308 aa4.78□□□□□ -1.64
CCL16-206ENST00000613642 PRORYQ9H606 182 aa4.78□□□□□ -1.64
CCL16-206ENST00000613642 RERGLQ9H628 205 aa4.78□□□□□ -1.64
CCL16-206ENST00000613642 TMEM106BQ9NUM4 274 aa4.78□□□□□ -1.64
CCL16-206ENST00000613642 TMEFF2Q9UIK5 374 aaPredicted RBP4.78□□□□□ -1.64
CCL16-206ENST00000613642 VDAC3Q9Y277 283 aa4.78□□□□□ -1.64
CCL16-206ENST00000613642 YARS2Q9Y2Z4 477 aaKnown RBP4.78□□□□□ -1.64
CCL16-206ENST00000613642 RPL36Q9Y3U8 105 aaKnown RBP4.78□□□□□ -1.64
CCL16-206ENST00000613642 LSM5Q9Y4Y9 91 aaKnown RBP4.78□□□□□ -1.64
CCL16-206ENST00000613642 SOX21Q9Y651 276 aaPredicted RBP4.78□□□□□ -1.64
CCL16-206ENST00000613642 SCN9AQ15858 1988 aa4.78□□□□□ -1.64
CCL16-206ENST00000613642 ATRNL1Q5VV63 1379 aa4.78□□□□□ -1.64
CCL16-206ENST00000613642 A0A0B4J2E0 115 aa4.77□□□□□ -1.65
CCL16-206ENST00000613642 KLF18A0A0U1RQI7 1052 aa4.77□□□□□ -1.65
CCL16-206ENST00000613642 A0A1B0GX12 115 aa4.77□□□□□ -1.65
CCL16-206ENST00000613642 TCRBV9S1A1TA0A576 114 aa4.77□□□□□ -1.65
CCL16-206ENST00000613642 PYCARD-AS1I3L0S3 204 aa4.77□□□□□ -1.65
CCL16-206ENST00000613642 SIRPB1O00241 398 aa4.77□□□□□ -1.65
CCL16-206ENST00000613642 PHF1O43189 567 aaPredicted RBP4.77□□□□□ -1.65
CCL16-206ENST00000613642 YPEL1O60688 119 aa4.77□□□□□ -1.65
CCL16-206ENST00000613642 ZNF217O75362 1048 aa4.77□□□□□ -1.65
CCL16-206ENST00000613642 TRAPPC6AO75865 159 aa4.77□□□□□ -1.65
CCL16-206ENST00000613642 UBL3O95164 117 aa4.77□□□□□ -1.65
CCL16-206ENST00000613642 DUS4LO95620 317 aaKnown RBP4.77□□□□□ -1.65
CCL16-206ENST00000613642 PTHP01270 115 aa4.77□□□□□ -1.65
CCL16-206ENST00000613642 FAM106CPP0CH98 169 aa4.77□□□□□ -1.65
CCL16-206ENST00000613642 CSRP1P21291 193 aaKnown RBP4.77□□□□□ -1.65
CCL16-206ENST00000613642 CD40P25942 277 aa4.77□□□□□ -1.65
CCL16-206ENST00000613642 RPL12P30050 165 aaKnown RBP4.77□□□□□ -1.65
CCL16-206ENST00000613642 TSPOP30536 169 aa4.77□□□□□ -1.65
CCL16-206ENST00000613642 TSFMP43897 325 aaKnown RBP4.77□□□□□ -1.65
CCL16-206ENST00000613642 IER3P46695 156 aa4.77□□□□□ -1.65
CCL16-206ENST00000613642 FOXA1P55317 472 aa4.77□□□□□ -1.65
CCL16-206ENST00000613642 GFRA1P56159 465 aa4.77□□□□□ -1.65
CCL16-206ENST00000613642 ADAM8P78325 824 aa4.77□□□□□ -1.65
CCL16-206ENST00000613642 ARG2P78540 354 aa4.77□□□□□ -1.65
CCL16-206ENST00000613642 PSG9Q00887 426 aa4.77□□□□□ -1.65
CCL16-206ENST00000613642 CXCL9Q07325 125 aa4.77□□□□□ -1.65
CCL16-206ENST00000613642 MELKQ14680 651 aa4.77□□□□□ -1.65
CCL16-206ENST00000613642 GINS1Q14691 196 aa4.77□□□□□ -1.65
CCL16-206ENST00000613642 PCOLCEQ15113 449 aa4.77□□□□□ -1.65
CCL16-206ENST00000613642 C3AR1Q16581 482 aa4.77□□□□□ -1.65
CCL16-206ENST00000613642 FAM106AQ4KMX7 169 aa4.77□□□□□ -1.65
CCL16-206ENST00000613642 TP53I3Q53FA7 332 aa4.77□□□□□ -1.65
CCL16-206ENST00000613642 PRR30Q53SZ7 412 aaPredicted RBP4.77□□□□□ -1.65
CCL16-206ENST00000613642 TCEAL5Q5H9L2 206 aa4.77□□□□□ -1.65
CCL16-206ENST00000613642 TMEM196Q5HYL7 178 aa4.77□□□□□ -1.65
CCL16-206ENST00000613642 FFAR4Q5NUL3 377 aa4.77□□□□□ -1.65
CCL16-206ENST00000613642 AADACL3Q5VUY0 350 aa4.77□□□□□ -1.65
CCL16-206ENST00000613642 TEX36Q5VZQ5 186 aa4.77□□□□□ -1.65
CCL16-206ENST00000613642 CEACAM20Q6UY09 585 aa4.77□□□□□ -1.65
CCL16-206ENST00000613642 ADAMTSL5Q6ZMM2 481 aa4.77□□□□□ -1.65
CCL16-206ENST00000613642 ZNF429Q86V71 674 aa4.77□□□□□ -1.65
CCL16-206ENST00000613642 STHQ8IWL8 128 aa4.77□□□□□ -1.65
CCL16-206ENST00000613642 PGBD5Q8N414 524 aa4.77□□□□□ -1.65
CCL16-206ENST00000613642 SYT8Q8NBV8 401 aa4.77□□□□□ -1.65
CCL16-206ENST00000613642 SLC38A5Q8WUX1 472 aa4.77□□□□□ -1.65
CCL16-206ENST00000613642 THEM6Q8WUY1 208 aa4.77□□□□□ -1.65
CCL16-206ENST00000613642 TMED6Q8WW62 240 aa4.77□□□□□ -1.65
CCL16-206ENST00000613642 ZNRF4Q8WWF5 429 aa4.77□□□□□ -1.65
CCL16-206ENST00000613642 MSI2Q96DH6 328 aaKnown RBP4.77□□□□□ -1.65
CCL16-206ENST00000613642 HPDLQ96IR7 371 aa4.77□□□□□ -1.65
CCL16-206ENST00000613642 CCDC140Q96MF4 163 aa4.77□□□□□ -1.65
CCL16-206ENST00000613642 DERL3Q96Q80 235 aa4.77□□□□□ -1.65
CCL16-206ENST00000613642 YPEL2Q96QA6 119 aa4.77□□□□□ -1.65
CCL16-206ENST00000613642 HIST1H2AAQ96QV6 131 aa4.77□□□□□ -1.65
CCL16-206ENST00000613642 JMJD8Q96S16 334 aa4.77□□□□□ -1.65
CCL16-206ENST00000613642 SLC25A21Q9BQT8 299 aaPredicted RBP4.77□□□□□ -1.65
CCL16-206ENST00000613642 NIPSNAP3BQ9BS92 247 aa4.77□□□□□ -1.65
CCL16-206ENST00000613642 GABARAPL3Q9BY60 117 aa4.77□□□□□ -1.65
CCL16-206ENST00000613642 SLC52A3Q9NQ40 469 aa4.77□□□□□ -1.65
CCL16-206ENST00000613642 CA10Q9NS85 328 aa4.77□□□□□ -1.65
CCL16-206ENST00000613642 CISHQ9NSE2 258 aa4.77□□□□□ -1.65
CCL16-206ENST00000613642 LOXL2Q9Y4K0 774 aa4.77□□□□□ -1.65
CCL16-206ENST00000613642 TNS1Q9HBL0 1735 aaKnown RBP4.77□□□□□ -1.65
CCL16-206ENST00000613642 FRMPD3Q5JV73 1810 aa4.76□□□□□ -1.65
CCL16-206ENST00000613642 A0A1W2PR77 199 aa4.76□□□□□ -1.65
CCL16-206ENST00000613642 TMEM129A0AVI4 362 aa4.76□□□□□ -1.65
CCL16-206ENST00000613642 OR4C46A6NHA9 309 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms