RNA–Protein interactions for RNA: ENST00000613444.4

USP39-220, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2 BASIC

Gene USP39, Length 2,161 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-220ENST00000613444 C1orf87Q8N0U7 546 aa11.91□□□□□ -0.5
USP39-220ENST00000613444 ZNRF1Q8ND25 227 aa11.91□□□□□ -0.5
USP39-220ENST00000613444 DEFB108BQ8NET1 73 aa11.91□□□□□ -0.5
USP39-220ENST00000613444 GAFA1Q96PS6 74 aa11.91□□□□□ -0.5
USP39-220ENST00000613444 SLC25A21Q9BQT8 299 aaPredicted RBP11.91□□□□□ -0.5
USP39-220ENST00000613444 ING3Q9NXR8 418 aa11.91□□□□□ -0.5
USP39-220ENST00000613444 DUX4Q9UBX2 424 aa11.91□□□□□ -0.5
USP39-220ENST00000613444 LAMP3Q9UQV4 416 aa11.91□□□□□ -0.5
USP39-220ENST00000613444 TENM4Q6N022 2769 aa11.9□□□□□ -0.5
USP39-220ENST00000613444 TRAV39A0A0B4J263 110 aa11.9□□□□□ -0.5
USP39-220ENST00000613444 IGKV1-6A0A0C4DH72 117 aa11.9□□□□□ -0.5
USP39-220ENST00000613444 CEACAM18A8MTB9 384 aa11.9□□□□□ -0.5
USP39-220ENST00000613444 TRDCB7Z8K6 153 aa11.9□□□□□ -0.5
USP39-220ENST00000613444 K7N7A8 449 aa11.9□□□□□ -0.5
USP39-220ENST00000613444 SELLP14151 372 aa11.9□□□□□ -0.5
USP39-220ENST00000613444 COL8A2P25067 703 aa11.9□□□□□ -0.5
USP39-220ENST00000613444 IGSF11Q5DX21 431 aa11.9□□□□□ -0.5
USP39-220ENST00000613444 ATPAF1Q5TC12 328 aaPredicted RBP11.9□□□□□ -0.5
USP39-220ENST00000613444 ASCC1Q8N9N2 400 aaKnown RBP11.9□□□□□ -0.5
USP39-220ENST00000613444 TERB2Q8NHR7 220 aa11.9□□□□□ -0.5
USP39-220ENST00000613444 SNX22Q96L94 193 aa11.9□□□□□ -0.5
USP39-220ENST00000613444 UBTD1Q9HAC8 227 aa11.9□□□□□ -0.5
USP39-220ENST00000613444 ALG5Q9Y673 324 aa11.9□□□□□ -0.5
USP39-220ENST00000613444 H7C1Q1 480 aa11.89□□□□□ -0.51
USP39-220ENST00000613444 PEX14O75381 377 aa11.89□□□□□ -0.51
USP39-220ENST00000613444 RP2O75695 350 aa11.89□□□□□ -0.51
USP39-220ENST00000613444 GYPAP02724 150 aa11.89□□□□□ -0.51
USP39-220ENST00000613444 OR5H8P0DN80 308 aa11.89□□□□□ -0.51
USP39-220ENST00000613444 DHRS11Q6UWP2 260 aa11.89□□□□□ -0.51
USP39-220ENST00000613444 ZNF561Q8N587 486 aa11.89□□□□□ -0.51
USP39-220ENST00000613444 CCDC107Q8WV48 283 aa11.89□□□□□ -0.51
USP39-220ENST00000613444 RAB1BQ9H0U4 201 aa11.89□□□□□ -0.51
USP39-220ENST00000613444 NECAP2Q9NVZ3 263 aa11.89□□□□□ -0.51
USP39-220ENST00000613444 KIF25Q9UIL4 384 aa11.89□□□□□ -0.51
USP39-220ENST00000613444 ZNF221Q9UK13 617 aa11.89□□□□□ -0.51
USP39-220ENST00000613444 VSIG4Q9Y279 399 aa11.89□□□□□ -0.51
USP39-220ENST00000613444 TACC2O95359 2948 aa11.89□□□□□ -0.51
USP39-220ENST00000613444 PPIAL4EA0A075B759 164 aa11.89□□□□□ -0.51
USP39-220ENST00000613444 TMEM30CPA0ZSE6 113 aa11.89□□□□□ -0.51
USP39-220ENST00000613444 C7orf66A4D0T2 115 aa11.89□□□□□ -0.51
USP39-220ENST00000613444 PPIAL4DF5H284 164 aa11.89□□□□□ -0.51
USP39-220ENST00000613444 LYNX1G3V0Z9 82 aa11.89□□□□□ -0.51
USP39-220ENST00000613444 FABP7O15540 132 aa11.89□□□□□ -0.51
USP39-220ENST00000613444 TK1P04183 234 aa11.89□□□□□ -0.51
USP39-220ENST00000613444 PPIAL4FP0DN26 164 aa11.89□□□□□ -0.51
USP39-220ENST00000613444 LYNX1P0DP58 116 aa11.89□□□□□ -0.51
USP39-220ENST00000613444 CARTPTQ16568 116 aa11.89□□□□□ -0.51
USP39-220ENST00000613444 MOB1BQ7L9L4 216 aa11.89□□□□□ -0.51
USP39-220ENST00000613444 SLC36A1Q7Z2H8 476 aa11.89□□□□□ -0.51
USP39-220ENST00000613444 PPIAL4AQ9Y536 164 aa11.89□□□□□ -0.51
USP39-220ENST00000613444 USP9YO00507 2555 aaPredicted RBP11.88□□□□□ -0.51
USP39-220ENST00000613444 DOCK11Q5JSL3 2073 aa11.88□□□□□ -0.51
USP39-220ENST00000613444 TRAV38-1A0A0B4J264 116 aa11.88□□□□□ -0.51
USP39-220ENST00000613444 KIR2DS1A0A191URI9 304 aa11.88□□□□□ -0.51
USP39-220ENST00000613444 OR5H14A6NHG9 310 aa11.88□□□□□ -0.51
USP39-220ENST00000613444 VSIG10L2P0DP72 767 aa11.88□□□□□ -0.51
USP39-220ENST00000613444 PLA2G2AP14555 144 aa11.88□□□□□ -0.51
USP39-220ENST00000613444 ANXA7P20073 488 aaKnown RBP11.88□□□□□ -0.51
USP39-220ENST00000613444 KIR2DS4P43632 304 aa11.88□□□□□ -0.51
USP39-220ENST00000613444 GLIPR1P48060 266 aa11.88□□□□□ -0.51
USP39-220ENST00000613444 TSPAN5P62079 268 aa11.88□□□□□ -0.51
USP39-220ENST00000613444 HLA-DRB3P79483 266 aa11.88□□□□□ -0.51
USP39-220ENST00000613444 KIR2DS1Q14954 304 aa11.88□□□□□ -0.51
USP39-220ENST00000613444 HFEQ30201 348 aa11.88□□□□□ -0.51
USP39-220ENST00000613444 KRBOX4Q5JUW0 171 aa11.88□□□□□ -0.51
USP39-220ENST00000613444 TPRX1Q8N7U7 411 aa11.88□□□□□ -0.51
USP39-220ENST00000613444 GIMAP1Q8WWP7 306 aa11.88□□□□□ -0.51
USP39-220ENST00000613444 IGFBPL1Q8WX77 278 aa11.88□□□□□ -0.51
USP39-220ENST00000613444 CCL13Q99616 98 aa11.88□□□□□ -0.51
USP39-220ENST00000613444 BEX2Q9BXY8 128 aa11.88□□□□□ -0.51
USP39-220ENST00000613444 GHITMQ9H3K2 345 aa11.88□□□□□ -0.51
USP39-220ENST00000613444 PLEKHF2Q9H8W4 249 aa11.88□□□□□ -0.51
USP39-220ENST00000613444 BEX1Q9HBH7 125 aa11.88□□□□□ -0.51
USP39-220ENST00000613444 A0A0A6YYJ9 748 aa11.88□□□□□ -0.51
USP39-220ENST00000613444 MGST3O14880 152 aa11.88□□□□□ -0.51
USP39-220ENST00000613444 SIGLEC5O15389 551 aa11.88□□□□□ -0.51
USP39-220ENST00000613444 FCN3O75636 299 aa11.88□□□□□ -0.51
USP39-220ENST00000613444 LY6HO94772 140 aa11.88□□□□□ -0.51
USP39-220ENST00000613444 DHFRP00374 187 aa11.88□□□□□ -0.51
USP39-220ENST00000613444 TLE4Q04727 773 aa11.88□□□□□ -0.51
USP39-220ENST00000613444 HMGN3Q15651 99 aa11.88□□□□□ -0.51
USP39-220ENST00000613444 PEG10Q86TG7 708 aaKnown RBP11.88□□□□□ -0.51
USP39-220ENST00000613444 FAM216BQ8N7L0 139 aa11.88□□□□□ -0.51
USP39-220ENST00000613444 CHAC2Q8WUX2 184 aa11.88□□□□□ -0.51
USP39-220ENST00000613444 ZNF665Q9H7R5 613 aa11.88□□□□□ -0.51
USP39-220ENST00000613444 TRAPPC2LQ9UL33 140 aa11.88□□□□□ -0.51
USP39-220ENST00000613444 TMEM17Q86X19 198 aa11.87□□□□□ -0.51
USP39-220ENST00000613444 ZDHHC22Q8N966 263 aa11.87□□□□□ -0.51
USP39-220ENST00000613444 OR4A4PQ8NGN8 299 aa11.87□□□□□ -0.51
USP39-220ENST00000613444 OR6F1Q8NGZ6 308 aa11.87□□□□□ -0.51
USP39-220ENST00000613444 MARCH1Q8TCQ1 289 aa11.87□□□□□ -0.51
USP39-220ENST00000613444 NEU4Q8WWR8 484 aaPredicted RBP11.87□□□□□ -0.51
USP39-220ENST00000613444 ZNF2Q9BSG1 426 aaPredicted RBP11.87□□□□□ -0.51
USP39-220ENST00000613444 CABLES2Q9BTV7 478 aa11.87□□□□□ -0.51
USP39-220ENST00000613444 TMPRSS13Q9BYE2 586 aa11.87□□□□□ -0.51
USP39-220ENST00000613444 DNTTIP1Q9H147 329 aa11.87□□□□□ -0.51
USP39-220ENST00000613444 MEIKINA0A087WXM9 373 aa11.86□□□□□ -0.51
USP39-220ENST00000613444 FSTL3O95633 263 aa11.86□□□□□ -0.51
USP39-220ENST00000613444 NPY4RP50391 375 aa11.86□□□□□ -0.51
USP39-220ENST00000613444 MRPS11P82912 194 aaKnown RBP11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms