RNA–Protein interactions for RNA: ENST00000611614.4

COPS7B-223, Transcript of COP9 signalosome subunit 7B, human

TSL 3 BASIC

Gene COPS7B, Length 2,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
COPS7B-223	ENST00000611614	C1QTNF9B	B2RNN3	333 aa		11.9	□□□□□ -0.5
COPS7B-223	ENST00000611614	C1QTNF9	P0C862	333 aa		11.9	□□□□□ -0.5
COPS7B-223	ENST00000611614	AGA	P20933	346 aa		11.9	□□□□□ -0.5
COPS7B-223	ENST00000611614	OPRM1	P35372	400 aa		11.9	□□□□□ -0.5
COPS7B-223	ENST00000611614	ARR3	P36575	388 aa		11.9	□□□□□ -0.5
COPS7B-223	ENST00000611614	SNRPE	P62304	92 aa	Known RBP	11.9	□□□□□ -0.5
COPS7B-223	ENST00000611614	PLP2	Q04941	152 aa		11.9	□□□□□ -0.5
COPS7B-223	ENST00000611614	UNQ6494/PRO21346	Q6UXR6	183 aa		11.9	□□□□□ -0.5
COPS7B-223	ENST00000611614	DPPA2	Q7Z7J5	298 aa		11.9	□□□□□ -0.5
COPS7B-223	ENST00000611614	C9orf106	Q8NAJ2	232 aa		11.9	□□□□□ -0.5
COPS7B-223	ENST00000611614	ZCCHC14	Q8WYQ9	949 aa	Known RBP	11.9	□□□□□ -0.5
COPS7B-223	ENST00000611614	METTL1	Q9UBP6	276 aa	Known RBP	11.9	□□□□□ -0.5
COPS7B-223	ENST00000611614	ST3GAL6	Q9Y274	331 aa		11.9	□□□□□ -0.5
COPS7B-223	ENST00000611614	IGF2R	P11717	2491 aa		11.9	□□□□□ -0.5
COPS7B-223	ENST00000611614	TSPAN15	O95858	294 aa		11.89	□□□□□ -0.51
COPS7B-223	ENST00000611614	SEC11B	P0C7V7	166 aa		11.89	□□□□□ -0.51
COPS7B-223	ENST00000611614	EIF2S3L	Q2VIR3	472 aa	Known RBP	11.89	□□□□□ -0.51
COPS7B-223	ENST00000611614	NAXE	Q8NCW5	288 aa		11.89	□□□□□ -0.51
COPS7B-223	ENST00000611614	CLCC1	Q96S66	551 aa		11.89	□□□□□ -0.51
COPS7B-223	ENST00000611614	LIME1	Q9H400	295 aa		11.89	□□□□□ -0.51
COPS7B-223	ENST00000611614	BORCS7-ASMT	A0A0B4J1R7	106 aa		11.89	□□□□□ -0.51
COPS7B-223	ENST00000611614	CNOT4	O95628	575 aa	Known RBP	11.89	□□□□□ -0.51
COPS7B-223	ENST00000611614	RAB5C	P51148	216 aa		11.89	□□□□□ -0.51
COPS7B-223	ENST00000611614	DYRK2	Q92630	601 aa		11.89	□□□□□ -0.51
COPS7B-223	ENST00000611614	AKR1E2	Q96JD6	320 aa		11.89	□□□□□ -0.51
COPS7B-223	ENST00000611614	SEBOX	Q9HB31	216 aa	Predicted RBP	11.89	□□□□□ -0.51
COPS7B-223	ENST00000611614	AMDHD2	Q9Y303	409 aa		11.89	□□□□□ -0.51
COPS7B-223	ENST00000611614	STRAP	Q9Y3F4	350 aa	Known RBP	11.89	□□□□□ -0.51
COPS7B-223	ENST00000611614	LAMA5	O15230	3695 aa		11.89	□□□□□ -0.51
COPS7B-223	ENST00000611614		C9JQL5	133 aa		11.88	□□□□□ -0.51
COPS7B-223	ENST00000611614		E5RGE8	158 aa		11.88	□□□□□ -0.51
COPS7B-223	ENST00000611614	PRRG2	O14669	202 aa		11.88	□□□□□ -0.51
COPS7B-223	ENST00000611614	PDCD6	O75340	191 aa		11.88	□□□□□ -0.51
COPS7B-223	ENST00000611614	HLA-H	P01893	362 aa		11.88	□□□□□ -0.51
COPS7B-223	ENST00000611614	ZNF728	P0DKX0	622 aa		11.88	□□□□□ -0.51
COPS7B-223	ENST00000611614	SNCA	P37840	140 aa		11.88	□□□□□ -0.51
COPS7B-223	ENST00000611614	GLP1R	P43220	463 aa		11.88	□□□□□ -0.51
COPS7B-223	ENST00000611614	FOXG1	P55316	489 aa	Predicted RBP	11.88	□□□□□ -0.51
COPS7B-223	ENST00000611614	RBM11	P57052	281 aa	Known RBP	11.88	□□□□□ -0.51
COPS7B-223	ENST00000611614	MALL	Q13021	153 aa		11.88	□□□□□ -0.51
COPS7B-223	ENST00000611614	BRICD5	Q6PL45	260 aa		11.88	□□□□□ -0.51
COPS7B-223	ENST00000611614	RPS10P5	Q9NQ39	176 aa		11.88	□□□□□ -0.51
COPS7B-223	ENST00000611614	NSG2	Q9Y328	171 aa		11.88	□□□□□ -0.51
COPS7B-223	ENST00000611614	MBD3L4	A6NDZ8	208 aa	Predicted RBP	11.88	□□□□□ -0.51
COPS7B-223	ENST00000611614	MBD3L3	A6NE82	208 aa	Predicted RBP	11.88	□□□□□ -0.51
COPS7B-223	ENST00000611614	MBD3L5	A6NJ08	208 aa	Predicted RBP	11.88	□□□□□ -0.51
COPS7B-223	ENST00000611614	AGPAT2	O15120	278 aa		11.88	□□□□□ -0.51
COPS7B-223	ENST00000611614	FABP1	P07148	127 aa		11.88	□□□□□ -0.51
COPS7B-223	ENST00000611614	OR8U9	P0C7N5	309 aa		11.88	□□□□□ -0.51
COPS7B-223	ENST00000611614	TMEM33	P57088	247 aa		11.88	□□□□□ -0.51
COPS7B-223	ENST00000611614	RAB1A	P62820	205 aa		11.88	□□□□□ -0.51
COPS7B-223	ENST00000611614	RHEB	Q15382	184 aa		11.88	□□□□□ -0.51
COPS7B-223	ENST00000611614	C1orf185	Q5T7R7	199 aa		11.88	□□□□□ -0.51
COPS7B-223	ENST00000611614	OR1K1	Q8NGR3	316 aa		11.88	□□□□□ -0.51
COPS7B-223	ENST00000611614	OR8U1	Q8NH10	309 aa		11.88	□□□□□ -0.51
COPS7B-223	ENST00000611614	MBD3L2	Q8NHZ7	208 aa	Predicted RBP	11.88	□□□□□ -0.51
COPS7B-223	ENST00000611614	NANP	Q8TBE9	248 aa		11.88	□□□□□ -0.51
COPS7B-223	ENST00000611614	FAM57A	Q8TBR7	257 aa		11.88	□□□□□ -0.51
COPS7B-223	ENST00000611614	MALSU1	Q96EH3	234 aa		11.88	□□□□□ -0.51
COPS7B-223	ENST00000611614	ZNF286A	Q9HBT8	521 aa		11.88	□□□□□ -0.51
COPS7B-223	ENST00000611614	PLA2G2E	Q9NZK7	142 aa		11.88	□□□□□ -0.51
COPS7B-223	ENST00000611614	FREM1	Q5H8C1	2179 aa		11.88	□□□□□ -0.51
COPS7B-223	ENST00000611614	COX5B	P10606	129 aa		11.87	□□□□□ -0.51
COPS7B-223	ENST00000611614	HOXC12	P31275	282 aa		11.87	□□□□□ -0.51
COPS7B-223	ENST00000611614	KIR2DL2	P43627	348 aa	Predicted RBP	11.87	□□□□□ -0.51
COPS7B-223	ENST00000611614	PPT1	P50897	306 aa		11.87	□□□□□ -0.51
COPS7B-223	ENST00000611614	GPR157	Q5UAW9	335 aa		11.87	□□□□□ -0.51
COPS7B-223	ENST00000611614	ZNF324B	Q6AW86	544 aa	Predicted RBP	11.87	□□□□□ -0.51
COPS7B-223	ENST00000611614	SLC22A25	Q6T423	547 aa		11.87	□□□□□ -0.51
COPS7B-223	ENST00000611614		Q6ZT83	130 aa		11.87	□□□□□ -0.51
COPS7B-223	ENST00000611614	CALHM1	Q8IU99	346 aa		11.87	□□□□□ -0.51
COPS7B-223	ENST00000611614	ZNF611	Q8N823	705 aa		11.87	□□□□□ -0.51
COPS7B-223	ENST00000611614		Q8NA96	180 aa		11.87	□□□□□ -0.51
COPS7B-223	ENST00000611614	SECTM1	Q8WVN6	248 aa		11.87	□□□□□ -0.51
COPS7B-223	ENST00000611614	REPIN1	Q9BWE0	567 aa	Known RBP	11.87	□□□□□ -0.51
COPS7B-223	ENST00000611614	PROCR	Q9UNN8	238 aa		11.87	□□□□□ -0.51
COPS7B-223	ENST00000611614	FAM221A	A4D161	298 aa		11.87	□□□□□ -0.51
COPS7B-223	ENST00000611614	IL18BP	O95998	194 aa		11.87	□□□□□ -0.51
COPS7B-223	ENST00000611614	DANCR	P0C864	163 aa		11.87	□□□□□ -0.51
COPS7B-223	ENST00000611614	ZNF44	P15621	663 aa		11.87	□□□□□ -0.51
COPS7B-223	ENST00000611614	FUT3	P21217	361 aa		11.87	□□□□□ -0.51
COPS7B-223	ENST00000611614	PIGP	P57054	158 aa		11.87	□□□□□ -0.51
COPS7B-223	ENST00000611614	UBE2N	P61088	152 aa	Known RBP	11.87	□□□□□ -0.51
COPS7B-223	ENST00000611614	GUSBP1	Q15486	140 aa		11.87	□□□□□ -0.51
COPS7B-223	ENST00000611614	GGNBP1	Q5YKI7	109 aa		11.87	□□□□□ -0.51
COPS7B-223	ENST00000611614	TMEM211	Q6ICI0	200 aa		11.87	□□□□□ -0.51
COPS7B-223	ENST00000611614	GFRAL	Q6UXV0	394 aa		11.87	□□□□□ -0.51
COPS7B-223	ENST00000611614	SLC25A26	Q70HW3	274 aa		11.87	□□□□□ -0.51
COPS7B-223	ENST00000611614	TOMM40L	Q969M1	308 aa		11.87	□□□□□ -0.51
COPS7B-223	ENST00000611614	MARS2	Q96GW9	593 aa	Known RBP	11.87	□□□□□ -0.51
COPS7B-223	ENST00000611614	GINS3	Q9BRX5	216 aa		11.87	□□□□□ -0.51
COPS7B-223	ENST00000611614	KCNIP3	Q9Y2W7	256 aa		11.87	□□□□□ -0.51
COPS7B-223	ENST00000611614	MED12L	Q86YW9	2145 aa		11.87	□□□□□ -0.51
COPS7B-223	ENST00000611614	NCOR2	Q9Y618	2525 aa		11.86	□□□□□ -0.51
COPS7B-223	ENST00000611614	C7orf77	A4D0Y5	90 aa		11.86	□□□□□ -0.51
COPS7B-223	ENST00000611614	GPR137B	O60478	399 aa		11.86	□□□□□ -0.51
COPS7B-223	ENST00000611614	CCNO	P22674	350 aa		11.86	□□□□□ -0.51
COPS7B-223	ENST00000611614	GUK1	Q16774	197 aa		11.86	□□□□□ -0.51
COPS7B-223	ENST00000611614	ABCA11P	Q4W5N1	156 aa		11.86	□□□□□ -0.51
COPS7B-223	ENST00000611614	HIKESHI	Q53FT3	197 aa		11.86	□□□□□ -0.51

Retrieved 100 of 20,778 RNA–protein pairs in 89.4 ms