RNA–Protein interactions for RNA: ENST00000608720.5

CTCFL-219, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best)

Gene CTCFL, Length 2,241 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-219ENST00000608720 FAM90A5PA8MXJ8 464 aa12.63□□□□□ -0.39
CTCFL-219ENST00000608720 FAM90A23PA8MXZ1 464 aa12.63□□□□□ -0.39
CTCFL-219ENST00000608720 OR7C1O76099 320 aaPredicted RBP12.63□□□□□ -0.39
CTCFL-219ENST00000608720 P04436 131 aa12.63□□□□□ -0.39
CTCFL-219ENST00000608720 FAM90A15PP0C7V4 464 aa12.63□□□□□ -0.39
CTCFL-219ENST00000608720 FAM90A13PP0C7W8 464 aa12.63□□□□□ -0.39
CTCFL-219ENST00000608720 FAM90A14PP0C7W9 464 aa12.63□□□□□ -0.39
CTCFL-219ENST00000608720 FAM90A24PP0C7X0 464 aa12.63□□□□□ -0.39
CTCFL-219ENST00000608720 RAB4AP20338 218 aa12.63□□□□□ -0.39
CTCFL-219ENST00000608720 NKX2-1P43699 371 aaPredicted RBP12.63□□□□□ -0.39
CTCFL-219ENST00000608720 PDCD1Q15116 288 aa12.63□□□□□ -0.39
CTCFL-219ENST00000608720 SRSF7Q16629 238 aaKnown RBP eCLIP12.63□□□□□ -0.39
CTCFL-219ENST00000608720 CEACAM16Q2WEN9 425 aa12.63□□□□□ -0.39
CTCFL-219ENST00000608720 KHDC3LQ587J8 217 aa12.63□□□□□ -0.39
CTCFL-219ENST00000608720 ZNF468Q5VIY5 522 aaPredicted RBP12.63□□□□□ -0.39
CTCFL-219ENST00000608720 Q6ZS49 121 aa12.63□□□□□ -0.39
CTCFL-219ENST00000608720 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.63□□□□□ -0.39
CTCFL-219ENST00000608720 GGNQ86UU5 652 aa12.63□□□□□ -0.39
CTCFL-219ENST00000608720 WDR5BQ86VZ2 330 aa12.63□□□□□ -0.39
CTCFL-219ENST00000608720 ABHD14BQ96IU4 210 aa12.63□□□□□ -0.39
CTCFL-219ENST00000608720 TMEM56Q96MV1 263 aa12.63□□□□□ -0.39
CTCFL-219ENST00000608720 SLC25A31Q9H0C2 315 aa12.63□□□□□ -0.39
CTCFL-219ENST00000608720 TMEM56-RWDD3S4R434 201 aa12.63□□□□□ -0.39
CTCFL-219ENST00000608720 FAM24AA6NFZ4 105 aa12.62□□□□□ -0.39
CTCFL-219ENST00000608720 CXCL13O43927 109 aa12.62□□□□□ -0.39
CTCFL-219ENST00000608720 ELOBQ15370 118 aa12.62□□□□□ -0.39
CTCFL-219ENST00000608720 SOHLH1Q5JUK2 328 aa12.62□□□□□ -0.39
CTCFL-219ENST00000608720 Q6ZPA2 131 aa12.62□□□□□ -0.39
CTCFL-219ENST00000608720 ZNF695Q8IW36 515 aa12.62□□□□□ -0.39
CTCFL-219ENST00000608720 Q8NFD4 153 aa12.62□□□□□ -0.39
CTCFL-219ENST00000608720 FGFBP3Q8TAT2 258 aa12.62□□□□□ -0.39
CTCFL-219ENST00000608720 SPSB4Q96A44 273 aa12.62□□□□□ -0.39
CTCFL-219ENST00000608720 PLEKHF2Q9H8W4 249 aa12.62□□□□□ -0.39
CTCFL-219ENST00000608720 GPR35Q9HC97 309 aa12.62□□□□□ -0.39
CTCFL-219ENST00000608720 UBE2J1Q9Y385 318 aaPredicted RBP12.62□□□□□ -0.39
CTCFL-219ENST00000608720 PITX3O75364 302 aa12.62□□□□□ -0.39
CTCFL-219ENST00000608720 GNRHRP30968 328 aa12.62□□□□□ -0.39
CTCFL-219ENST00000608720 RND3P61587 244 aa12.62□□□□□ -0.39
CTCFL-219ENST00000608720 NKX6-1P78426 367 aaPredicted RBP12.62□□□□□ -0.39
CTCFL-219ENST00000608720 HNF4GQ14541 408 aa12.62□□□□□ -0.39
CTCFL-219ENST00000608720 HIKESHIQ53FT3 197 aa12.62□□□□□ -0.39
CTCFL-219ENST00000608720 ABLIM2Q6H8Q1 611 aa12.62□□□□□ -0.39
CTCFL-219ENST00000608720 SPNS3Q6ZMD2 512 aa12.62□□□□□ -0.39
CTCFL-219ENST00000608720 ZNF611Q8N823 705 aa12.62□□□□□ -0.39
CTCFL-219ENST00000608720 OR8G5Q8NG78 346 aa12.62□□□□□ -0.39
CTCFL-219ENST00000608720 OR2G3Q8NGZ4 309 aa12.62□□□□□ -0.39
CTCFL-219ENST00000608720 OR2V1Q8NHB1 315 aa12.62□□□□□ -0.39
CTCFL-219ENST00000608720 C1QTNF5Q9BXJ0 243 aa12.62□□□□□ -0.39
CTCFL-219ENST00000608720 FSCN3Q9NQT6 498 aa12.62□□□□□ -0.39
CTCFL-219ENST00000608720 P4HTMQ9NXG6 502 aa12.62□□□□□ -0.39
CTCFL-219ENST00000608720 RTTNQ86VV8 2226 aa12.61□□□□□ -0.39
CTCFL-219ENST00000608720 A8MWP6 167 aa12.61□□□□□ -0.39
CTCFL-219ENST00000608720 HSPA12AO43301 675 aa12.61□□□□□ -0.39
CTCFL-219ENST00000608720 SOD3P08294 240 aa12.61□□□□□ -0.39
CTCFL-219ENST00000608720 PPP1CCP36873 323 aaKnown RBP12.61□□□□□ -0.39
CTCFL-219ENST00000608720 FOLR3P41439 243 aa12.61□□□□□ -0.39
CTCFL-219ENST00000608720 CLDN15P56746 228 aa12.61□□□□□ -0.39
CTCFL-219ENST00000608720 TRA2AQ13595 282 aaKnown RBP eCLIP12.61□□□□□ -0.39
CTCFL-219ENST00000608720 ZNF674Q2M3X9 581 aa12.61□□□□□ -0.39
CTCFL-219ENST00000608720 SLC25A26Q70HW3 274 aa12.61□□□□□ -0.39
CTCFL-219ENST00000608720 TBC1D26Q86UD7 250 aa12.61□□□□□ -0.39
CTCFL-219ENST00000608720 CALHM1Q8IU99 346 aa12.61□□□□□ -0.39
CTCFL-219ENST00000608720 SUMF2Q8NBJ7 301 aa12.61□□□□□ -0.39
CTCFL-219ENST00000608720 NDUFAF3Q9BU61 184 aa12.61□□□□□ -0.39
CTCFL-219ENST00000608720 PRDM14Q9GZV8 571 aa12.61□□□□□ -0.39
CTCFL-219ENST00000608720 SLC7A10Q9NS82 523 aa12.61□□□□□ -0.39
CTCFL-219ENST00000608720 MYO7BQ6PIF6 2116 aa12.61□□□□□ -0.39
CTCFL-219ENST00000608720 DUXBA0A1W2PPF3 345 aa12.61□□□□□ -0.39
CTCFL-219ENST00000608720 TK1P04183 234 aa12.61□□□□□ -0.39
CTCFL-219ENST00000608720 OR13C7P0DN81 318 aa12.61□□□□□ -0.39
CTCFL-219ENST00000608720 EDN3P14138 238 aa12.61□□□□□ -0.39
CTCFL-219ENST00000608720 NOVA1P51513 510 aaKnown RBP12.61□□□□□ -0.39
CTCFL-219ENST00000608720 TRIM61Q5EBN2 209 aa12.61□□□□□ -0.39
CTCFL-219ENST00000608720 UNQ6494/PRO21346Q6UXR6 183 aa12.61□□□□□ -0.39
CTCFL-219ENST00000608720 TGIF2LXQ8IUE1 241 aa12.61□□□□□ -0.39
CTCFL-219ENST00000608720 SELENOHQ8IZQ5 122 aaKnown RBP12.61□□□□□ -0.39
CTCFL-219ENST00000608720 OR10D3Q8NH80 312 aa12.61□□□□□ -0.39
CTCFL-219ENST00000608720 RNASEH2CQ8TDP1 164 aaKnown RBP12.61□□□□□ -0.39
CTCFL-219ENST00000608720 EXTL1Q92935 676 aa12.61□□□□□ -0.39
CTCFL-219ENST00000608720 ADGRG7Q96K78 797 aa12.61□□□□□ -0.39
CTCFL-219ENST00000608720 GPR61Q9BZJ8 451 aa12.61□□□□□ -0.39
CTCFL-219ENST00000608720 ARID1AO14497 2285 aa12.61□□□□□ -0.39
CTCFL-219ENST00000608720 IGSF23A1L1A6 192 aa12.6□□□□□ -0.39
CTCFL-219ENST00000608720 DVL1O14640 695 aa12.6□□□□□ -0.39
CTCFL-219ENST00000608720 MMP7P09237 267 aaPredicted RBP12.6□□□□□ -0.39
CTCFL-219ENST00000608720 CCL4P13236 92 aa12.6□□□□□ -0.39
CTCFL-219ENST00000608720 FGF7P21781 194 aa12.6□□□□□ -0.39
CTCFL-219ENST00000608720 ATP6V0CP27449 155 aa12.6□□□□□ -0.39
CTCFL-219ENST00000608720 NPBWR2P48146 333 aa12.6□□□□□ -0.39
CTCFL-219ENST00000608720 ASCL1P50553 236 aa12.6□□□□□ -0.39
CTCFL-219ENST00000608720 VAMP2P63027 116 aa12.6□□□□□ -0.39
CTCFL-219ENST00000608720 DAZAP2Q15038 168 aaPredicted RBP12.6□□□□□ -0.39
CTCFL-219ENST00000608720 SPIN3Q5JUX0 258 aa12.6□□□□□ -0.39
CTCFL-219ENST00000608720 Q8WTZ3 238 aa12.6□□□□□ -0.39
CTCFL-219ENST00000608720 Q9N2K0 584 aa12.6□□□□□ -0.39
CTCFL-219ENST00000608720 LYRM2Q9NU23 88 aaPredicted RBP12.6□□□□□ -0.39
CTCFL-219ENST00000608720 A0A0G2JMM0 328 aa12.6□□□□□ -0.39
CTCFL-219ENST00000608720 A0A1W2PPB8 328 aa12.6□□□□□ -0.39
CTCFL-219ENST00000608720 A0A1W2PRS3 328 aa12.6□□□□□ -0.39
CTCFL-219ENST00000608720 RBFOX3A6NFN3 312 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms