RNA–Protein interactions for RNA: ENST00000608568.1

SSX9-202, Transcript of Protein SSX9, humanhuman

TSL 4 BASIC

Gene SSX9, Length 580 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX9-202ENST00000608568 TCN2P20062 427 aa4.42□□□□□ -1.7
SSX9-202ENST00000608568 CD40P25942 277 aa4.42□□□□□ -1.7
SSX9-202ENST00000608568 TLX1P31314 330 aaPredicted RBP4.42□□□□□ -1.7
SSX9-202ENST00000608568 BSGP35613 385 aa4.42□□□□□ -1.7
SSX9-202ENST00000608568 ALDH3B1P43353 468 aa4.42□□□□□ -1.7
SSX9-202ENST00000608568 PRLHRP49683 370 aa4.42□□□□□ -1.7
SSX9-202ENST00000608568 CLDN18P56856 261 aa4.42□□□□□ -1.7
SSX9-202ENST00000608568 FXYD6P3P58550 94 aa4.42□□□□□ -1.7
SSX9-202ENST00000608568 MFGE8Q08431 387 aaPredicted RBP4.42□□□□□ -1.7
SSX9-202ENST00000608568 RAB32Q13637 225 aa4.42□□□□□ -1.7
SSX9-202ENST00000608568 SLC17A1Q14916 467 aa4.42□□□□□ -1.7
SSX9-202ENST00000608568 CEBPEQ15744 281 aa4.42□□□□□ -1.7
SSX9-202ENST00000608568 ZIC1Q15915 447 aa4.42□□□□□ -1.7
SSX9-202ENST00000608568 ZNF260Q3ZCT1 412 aa4.42□□□□□ -1.7
SSX9-202ENST00000608568 PDZD11Q5EBL8 140 aa4.42□□□□□ -1.7
SSX9-202ENST00000608568 EMC4Q5J8M3 183 aa4.42□□□□□ -1.7
SSX9-202ENST00000608568 ACTL10Q5JWF8 245 aa4.42□□□□□ -1.7
SSX9-202ENST00000608568 C1orf229Q6ZS94 237 aaPredicted RBP4.42□□□□□ -1.7
SSX9-202ENST00000608568 NUP54Q7Z3B4 507 aa4.42□□□□□ -1.7
SSX9-202ENST00000608568 AMZ2Q86W34 360 aa4.42□□□□□ -1.7
SSX9-202ENST00000608568 PLXDC1Q8IUK5 500 aa4.42□□□□□ -1.7
SSX9-202ENST00000608568 MTURNQ8N3F0 131 aa4.42□□□□□ -1.7
SSX9-202ENST00000608568 CSNK1A1LQ8N752 337 aa4.42□□□□□ -1.7
SSX9-202ENST00000608568 Q8NA96 180 aa4.42□□□□□ -1.7
SSX9-202ENST00000608568 OR51D1Q8NGF3 324 aa4.42□□□□□ -1.7
SSX9-202ENST00000608568 OR5L1Q8NGL2 311 aa4.42□□□□□ -1.7
SSX9-202ENST00000608568 OR1L3Q8NH93 324 aa4.42□□□□□ -1.7
SSX9-202ENST00000608568 FLVCR1-AS1Q8TAF5 88 aa4.42□□□□□ -1.7
SSX9-202ENST00000608568 FNDC9Q8TBE3 224 aa4.42□□□□□ -1.7
SSX9-202ENST00000608568 ZCCHC10Q8TBK6 192 aa4.42□□□□□ -1.7
SSX9-202ENST00000608568 GPR119Q8TDV5 335 aa4.42□□□□□ -1.7
SSX9-202ENST00000608568 PTPMT1Q8WUK0 201 aaPredicted RBP4.42□□□□□ -1.7
SSX9-202ENST00000608568 SLC25A43Q8WUT9 341 aaPredicted RBP4.42□□□□□ -1.7
SSX9-202ENST00000608568 TMEM255BQ8WV15 326 aa4.42□□□□□ -1.7
SSX9-202ENST00000608568 DVL3Q92997 716 aaPredicted RBP4.42□□□□□ -1.7
SSX9-202ENST00000608568 FAM46BQ96A09 425 aa4.42□□□□□ -1.7
SSX9-202ENST00000608568 MRPL24Q96A35 216 aaKnown RBP4.42□□□□□ -1.7
SSX9-202ENST00000608568 RPUSD4Q96CM3 377 aaKnown RBP4.42□□□□□ -1.7
SSX9-202ENST00000608568 ZNF501Q96CX3 271 aaPredicted RBP4.42□□□□□ -1.7
SSX9-202ENST00000608568 ZNF514Q96K75 400 aaPredicted RBP4.42□□□□□ -1.7
SSX9-202ENST00000608568 AMDHD1Q96NU7 426 aa4.42□□□□□ -1.7
SSX9-202ENST00000608568 ALKBH3Q96Q83 286 aaPredicted RBP4.42□□□□□ -1.7
SSX9-202ENST00000608568 GPX7Q96SL4 187 aaPredicted RBP4.42□□□□□ -1.7
SSX9-202ENST00000608568 PRSS27Q9BQR3 290 aa4.42□□□□□ -1.7
SSX9-202ENST00000608568 WFDC6Q9BQY6 131 aa4.42□□□□□ -1.7
SSX9-202ENST00000608568 VPS25Q9BRG1 176 aa4.42□□□□□ -1.7
SSX9-202ENST00000608568 VAMP8Q9BV40 100 aa4.42□□□□□ -1.7
SSX9-202ENST00000608568 SF3B5Q9BWJ5 86 aaKnown RBP4.42□□□□□ -1.7
SSX9-202ENST00000608568 PARD6GQ9BYG4 376 aaPredicted RBP4.42□□□□□ -1.7
SSX9-202ENST00000608568 ZNF552Q9H707 407 aaPredicted RBP4.42□□□□□ -1.7
SSX9-202ENST00000608568 WFDC1Q9HC57 220 aa4.42□□□□□ -1.7
SSX9-202ENST00000608568 FAM60AQ9NP50 221 aa4.42□□□□□ -1.7
SSX9-202ENST00000608568 GPR84Q9NQS5 396 aa4.42□□□□□ -1.7
SSX9-202ENST00000608568 FGF21Q9NSA1 209 aa4.42□□□□□ -1.7
SSX9-202ENST00000608568 SOHLH2Q9NX45 425 aa4.42□□□□□ -1.7
SSX9-202ENST00000608568 BET1LQ9NYM9 111 aa4.42□□□□□ -1.7
SSX9-202ENST00000608568 CISD1Q9NZ45 108 aaKnown RBP4.42□□□□□ -1.7
SSX9-202ENST00000608568 FLRT3Q9NZU0 649 aa4.42□□□□□ -1.7
SSX9-202ENST00000608568 GSKIPQ9P0R6 139 aa4.42□□□□□ -1.7
SSX9-202ENST00000608568 B3GAT1Q9P2W7 334 aa4.42□□□□□ -1.7
SSX9-202ENST00000608568 IL19Q9UHD0 177 aa4.42□□□□□ -1.7
SSX9-202ENST00000608568 SLC7A7Q9UM01 511 aa4.42□□□□□ -1.7
SSX9-202ENST00000608568 ST3GAL6Q9Y274 331 aa4.42□□□□□ -1.7
SSX9-202ENST00000608568 ZNF443Q9Y2A4 671 aaPredicted RBP4.42□□□□□ -1.7
SSX9-202ENST00000608568 TMED7Q9Y3B3 224 aa4.42□□□□□ -1.7
SSX9-202ENST00000608568 MRPS16Q9Y3D3 137 aaKnown RBP4.42□□□□□ -1.7
SSX9-202ENST00000608568 WIPI2Q9Y4P8 454 aa4.42□□□□□ -1.7
SSX9-202ENST00000608568 COX11Q9Y6N1 276 aa4.42□□□□□ -1.7
SSX9-202ENST00000608568 NUP214P35658 2090 aaPredicted RBP4.42□□□□□ -1.7
SSX9-202ENST00000608568 ANKHD1Q8IWZ3 2542 aaKnown RBP4.41□□□□□ -1.7
SSX9-202ENST00000608568 FLNAP21333 2647 aaKnown RBP4.41□□□□□ -1.7
SSX9-202ENST00000608568 TRAV9-1A0A075B6T8 112 aa4.41□□□□□ -1.7
SSX9-202ENST00000608568 IGHV2OR16-5A0A0B4J2B6 119 aa4.41□□□□□ -1.7
SSX9-202ENST00000608568 OR6C6A6NF89 314 aa4.41□□□□□ -1.7
SSX9-202ENST00000608568 ZNF860A6NHJ4 632 aa4.41□□□□□ -1.7
SSX9-202ENST00000608568 GJE1A6NN92 205 aa4.41□□□□□ -1.7
SSX9-202ENST00000608568 ZNF732B4DXR9 585 aa4.41□□□□□ -1.7
SSX9-202ENST00000608568 SHISA8B8ZZ34 492 aa4.41□□□□□ -1.7
SSX9-202ENST00000608568 TMEM150CB9EJG8 249 aa4.41□□□□□ -1.7
SSX9-202ENST00000608568 CCL25O15444 150 aa4.41□□□□□ -1.7
SSX9-202ENST00000608568 NME2P1O60361 137 aa4.41□□□□□ -1.7
SSX9-202ENST00000608568 RAMP3O60896 148 aa4.41□□□□□ -1.7
SSX9-202ENST00000608568 B4GALT2O60909 372 aa4.41□□□□□ -1.7
SSX9-202ENST00000608568 CA11O75493 328 aa4.41□□□□□ -1.7
SSX9-202ENST00000608568 SCRG1O75711 98 aa4.41□□□□□ -1.7
SSX9-202ENST00000608568 IFNA1P01562 189 aa4.41□□□□□ -1.7
SSX9-202ENST00000608568 REG1AP05451 166 aa4.41□□□□□ -1.7
SSX9-202ENST00000608568 CSN2P05814 226 aa4.41□□□□□ -1.7
SSX9-202ENST00000608568 PFN1P07737 140 aaKnown RBP4.41□□□□□ -1.7
SSX9-202ENST00000608568 OR4A8P0C604 315 aa4.41□□□□□ -1.7
SSX9-202ENST00000608568 CD99P14209 185 aa4.41□□□□□ -1.7
SSX9-202ENST00000608568 NPPBP16860 134 aa4.41□□□□□ -1.7
SSX9-202ENST00000608568 AKR1C4P17516 323 aa4.41□□□□□ -1.7
SSX9-202ENST00000608568 IGFBP3P17936 291 aaPredicted RBP4.41□□□□□ -1.7
SSX9-202ENST00000608568 GNLYP22749 145 aa4.41□□□□□ -1.7
SSX9-202ENST00000608568 RBMXP38159 391 aaKnown RBP4.41□□□□□ -1.7
SSX9-202ENST00000608568 CNN1P51911 297 aaKnown RBP4.41□□□□□ -1.7
SSX9-202ENST00000608568 EFNA3P52797 238 aa4.41□□□□□ -1.7
SSX9-202ENST00000608568 PRKAG1P54619 331 aa4.41□□□□□ -1.7
SSX9-202ENST00000608568 TPPP2P59282 170 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms