RNA–Protein interactions for RNA: ENST00000608440.5

CTCFL-218, Transcript of CCCTC-binding factor like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CTCFL, Length 2,749 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-218ENST00000608440 RPRMQ9NS64 109 aa10.9□□□□□ -0.66
CTCFL-218ENST00000608440 VDAC3Q9Y277 283 aa10.9□□□□□ -0.66
CTCFL-218ENST00000608440 OR2T8A6NH00 312 aa10.89□□□□□ -0.67
CTCFL-218ENST00000608440 A6NJY4 79 aa10.89□□□□□ -0.67
CTCFL-218ENST00000608440 ZNF732B4DXR9 585 aa10.89□□□□□ -0.67
CTCFL-218ENST00000608440 BGLAPP02818 100 aa10.89□□□□□ -0.67
CTCFL-218ENST00000608440 TYMSP04818 313 aa10.89□□□□□ -0.67
CTCFL-218ENST00000608440 TMEM187Q14656 261 aa10.89□□□□□ -0.67
CTCFL-218ENST00000608440 KCNIP4Q6PIL6 250 aa10.89□□□□□ -0.67
CTCFL-218ENST00000608440 PRSS57Q6UWY2 283 aa10.89□□□□□ -0.67
CTCFL-218ENST00000608440 RTN4IP1Q8WWV3 396 aaPredicted RBP10.89□□□□□ -0.67
CTCFL-218ENST00000608440 ADIPOR1Q96A54 375 aa10.89□□□□□ -0.67
CTCFL-218ENST00000608440 WDYHV1Q96HA8 205 aa10.89□□□□□ -0.67
CTCFL-218ENST00000608440 RSG1Q9BU20 258 aa10.89□□□□□ -0.67
CTCFL-218ENST00000608440 TMEM59Q9BXS4 323 aa10.89□□□□□ -0.67
CTCFL-218ENST00000608440 C2orf16Q68DN1 1984 aa10.89□□□□□ -0.67
CTCFL-218ENST00000608440 G3V3Y1 287 aa10.89□□□□□ -0.67
CTCFL-218ENST00000608440 ADH5P11766 374 aa10.89□□□□□ -0.67
CTCFL-218ENST00000608440 OR3A4PP47883 348 aa10.89□□□□□ -0.67
CTCFL-218ENST00000608440 GFRA1P56159 465 aa10.89□□□□□ -0.67
CTCFL-218ENST00000608440 RPL18Q07020 188 aaKnown RBP10.89□□□□□ -0.67
CTCFL-218ENST00000608440 ABCA11PQ4W5N1 156 aa10.89□□□□□ -0.67
CTCFL-218ENST00000608440 TMEM215Q68D42 235 aa10.89□□□□□ -0.67
CTCFL-218ENST00000608440 WBP2NLQ6ICG8 309 aa10.89□□□□□ -0.67
CTCFL-218ENST00000608440 HIST2H2ABQ8IUE6 130 aaPredicted RBP10.89□□□□□ -0.67
CTCFL-218ENST00000608440 CTHRC1Q96CG8 243 aa10.89□□□□□ -0.67
CTCFL-218ENST00000608440 FOXQ1Q9C009 403 aa10.89□□□□□ -0.67
CTCFL-218ENST00000608440 ZDHHC11Q9H8X9 412 aa10.89□□□□□ -0.67
CTCFL-218ENST00000608440 ZNF586Q9NXT0 402 aa10.89□□□□□ -0.67
CTCFL-218ENST00000608440 ANAPC10Q9UM13 185 aa10.89□□□□□ -0.67
CTCFL-218ENST00000608440 CYR61O00622 381 aa10.88□□□□□ -0.67
CTCFL-218ENST00000608440 HMGB3O15347 200 aaKnown RBP10.88□□□□□ -0.67
CTCFL-218ENST00000608440 SLC16A7O60669 478 aa10.88□□□□□ -0.67
CTCFL-218ENST00000608440 MTCP1P56278 107 aa10.88□□□□□ -0.67
CTCFL-218ENST00000608440 RHOGP84095 191 aa10.88□□□□□ -0.67
CTCFL-218ENST00000608440 KCTD18Q6PI47 426 aaPredicted RBP10.88□□□□□ -0.67
CTCFL-218ENST00000608440 GATSQ8NAP1 163 aa10.88□□□□□ -0.67
CTCFL-218ENST00000608440 KCNG3Q8TAE7 436 aa10.88□□□□□ -0.67
CTCFL-218ENST00000608440 PLPPR1Q8TBJ4 325 aa10.88□□□□□ -0.67
CTCFL-218ENST00000608440 SGCZQ96LD1 299 aa10.88□□□□□ -0.67
CTCFL-218ENST00000608440 FAM60AQ9NP50 221 aa10.88□□□□□ -0.67
CTCFL-218ENST00000608440 THAP10Q9P2Z0 257 aaPredicted RBP10.88□□□□□ -0.67
CTCFL-218ENST00000608440 NXT1Q9UKK6 140 aaKnown RBP10.88□□□□□ -0.67
CTCFL-218ENST00000608440 HS3ST2Q9Y278 367 aa10.88□□□□□ -0.67
CTCFL-218ENST00000608440 KBTBD11O94819 623 aa10.88□□□□□ -0.67
CTCFL-218ENST00000608440 APOBEC3AP31941 199 aaPredicted RBP10.88□□□□□ -0.67
CTCFL-218ENST00000608440 MPLP40238 635 aa10.88□□□□□ -0.67
CTCFL-218ENST00000608440 ZNF726P1Q15940 193 aa10.88□□□□□ -0.67
CTCFL-218ENST00000608440 TRIM61Q5EBN2 209 aa10.88□□□□□ -0.67
CTCFL-218ENST00000608440 FIGLAQ6QHK4 219 aa10.88□□□□□ -0.67
CTCFL-218ENST00000608440 TMEFF1Q8IYR6 380 aa10.88□□□□□ -0.67
CTCFL-218ENST00000608440 SIGLECL1Q8N7X8 197 aa10.88□□□□□ -0.67
CTCFL-218ENST00000608440 Q8N976 141 aa10.88□□□□□ -0.67
CTCFL-218ENST00000608440 OR14C36Q8NHC7 312 aa10.88□□□□□ -0.67
CTCFL-218ENST00000608440 GPX7Q96SL4 187 aaPredicted RBP10.88□□□□□ -0.67
CTCFL-218ENST00000608440 PLEKHF2Q9H8W4 249 aa10.88□□□□□ -0.67
CTCFL-218ENST00000608440 IGKV1D-42A0A075B6H8 117 aa10.87□□□□□ -0.67
CTCFL-218ENST00000608440 OTOL1A6NHN0 477 aaPredicted RBP10.87□□□□□ -0.67
CTCFL-218ENST00000608440 SHISA7A6NL88 538 aa10.87□□□□□ -0.67
CTCFL-218ENST00000608440 HSPB2A8KAH6 182 aa10.87□□□□□ -0.67
CTCFL-218ENST00000608440 GYPAP02724 150 aa10.87□□□□□ -0.67
CTCFL-218ENST00000608440 AADACP22760 399 aa10.87□□□□□ -0.67
CTCFL-218ENST00000608440 HSPB2Q16082 182 aa10.87□□□□□ -0.67
CTCFL-218ENST00000608440 NNATQ16517 81 aa10.87□□□□□ -0.67
CTCFL-218ENST00000608440 SAMD13Q5VXD3 122 aa10.87□□□□□ -0.67
CTCFL-218ENST00000608440 LINC00346Q8IVM7 164 aa10.87□□□□□ -0.67
CTCFL-218ENST00000608440 TDHQ8IZJ6 230 aa10.87□□□□□ -0.67
CTCFL-218ENST00000608440 CENPMQ9NSP4 180 aa10.87□□□□□ -0.67
CTCFL-218ENST00000608440 TMEM74BQ9NUR3 256 aa10.87□□□□□ -0.67
CTCFL-218ENST00000608440 TP73-AS1Q9UF72 201 aa10.87□□□□□ -0.67
CTCFL-218ENST00000608440 ZBTB32Q9Y2Y4 487 aaPredicted RBP10.87□□□□□ -0.67
CTCFL-218ENST00000608440 SPAG17Q6Q759 2223 aa10.87□□□□□ -0.67
CTCFL-218ENST00000608440 A0A1W2PR80 420 aa10.87□□□□□ -0.67
CTCFL-218ENST00000608440 IGLON5A6NGN9 336 aa10.87□□□□□ -0.67
CTCFL-218ENST00000608440 PHF1O43189 567 aaPredicted RBP10.87□□□□□ -0.67
CTCFL-218ENST00000608440 ZNF737O75373 536 aa10.87□□□□□ -0.67
CTCFL-218ENST00000608440 CSTAP01040 98 aa10.87□□□□□ -0.67
CTCFL-218ENST00000608440 CRISP2P16562 243 aa10.87□□□□□ -0.67
CTCFL-218ENST00000608440 SRP14P37108 136 aaKnown RBP10.87□□□□□ -0.67
CTCFL-218ENST00000608440 GABRA2P47869 451 aa10.87□□□□□ -0.67
CTCFL-218ENST00000608440 LGALS7P47929 136 aa10.87□□□□□ -0.67
CTCFL-218ENST00000608440 ZIC1Q15915 447 aa10.87□□□□□ -0.67
CTCFL-218ENST00000608440 ZNF468Q5VIY5 522 aaPredicted RBP10.87□□□□□ -0.67
CTCFL-218ENST00000608440 ZNF765Q7L2R6 523 aa10.87□□□□□ -0.67
CTCFL-218ENST00000608440 CENPVQ7Z7K6 275 aaPredicted RBP10.87□□□□□ -0.67
CTCFL-218ENST00000608440 AMZ2Q86W34 360 aa10.87□□□□□ -0.67
CTCFL-218ENST00000608440 CDRT4Q8N9R6 151 aa10.87□□□□□ -0.67
CTCFL-218ENST00000608440 LRRC75AQ8NAA5 344 aa10.87□□□□□ -0.67
CTCFL-218ENST00000608440 OR2M3Q8NG83 312 aa10.87□□□□□ -0.67
CTCFL-218ENST00000608440 OR51T1Q8NGJ9 327 aa10.87□□□□□ -0.67
CTCFL-218ENST00000608440 ZNF519Q8TB69 540 aa10.87□□□□□ -0.67
CTCFL-218ENST00000608440 P2RX4Q99571 388 aa10.87□□□□□ -0.67
CTCFL-218ENST00000608440 HDHD3Q9BSH5 251 aaPredicted RBP10.87□□□□□ -0.67
CTCFL-218ENST00000608440 LIME1Q9H400 295 aa10.87□□□□□ -0.67
CTCFL-218ENST00000608440 NAA60Q9H7X0 242 aa10.87□□□□□ -0.67
CTCFL-218ENST00000608440 TNRC18O15417 2968 aaPredicted RBP10.87□□□□□ -0.67
CTCFL-218ENST00000608440 IGHV1-69-2A0A0G2JMI3 117 aa10.86□□□□□ -0.67
CTCFL-218ENST00000608440 NKX2-6A6NCS4 301 aa10.86□□□□□ -0.67
CTCFL-218ENST00000608440 H3BP45 60 aa10.86□□□□□ -0.67
CTCFL-218ENST00000608440 GPR1P46091 355 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms