RNA–Protein interactions for RNA: ENST00000607520.1

SCARNA15-201, small Cajal body-specific RNA 15, humanhuman

BASIC

Gene SCARNA15, Length 4,325 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA15-201ENST00000607520 KLF4O43474 513 aa4.39□□□□□ -1.71
SCARNA15-201ENST00000607520 HLA-AP01891 365 aaKnown RBP4.39□□□□□ -1.71
SCARNA15-201ENST00000607520 APOC3P02656 99 aa4.39□□□□□ -1.71
SCARNA15-201ENST00000607520 HPXP02790 462 aa4.39□□□□□ -1.71
SCARNA15-201ENST00000607520 PET100P0DJ07 73 aa4.39□□□□□ -1.71
SCARNA15-201ENST00000607520 PVALBP20472 110 aaPredicted RBP4.39□□□□□ -1.71
SCARNA15-201ENST00000607520 HTR1DP28221 377 aa4.39□□□□□ -1.71
SCARNA15-201ENST00000607520 FAM3AP98173 230 aa4.39□□□□□ -1.71
SCARNA15-201ENST00000607520 ROM1Q03395 351 aa4.39□□□□□ -1.71
SCARNA15-201ENST00000607520 BAMBIQ13145 260 aa4.39□□□□□ -1.71
SCARNA15-201ENST00000607520 MSMO1Q15800 293 aa4.39□□□□□ -1.71
SCARNA15-201ENST00000607520 MPV17LQ2QL34 196 aa4.39□□□□□ -1.71
SCARNA15-201ENST00000607520 CR1LQ2VPA4 569 aa4.39□□□□□ -1.71
SCARNA15-201ENST00000607520 VMA21Q3ZAQ7 101 aa4.39□□□□□ -1.71
SCARNA15-201ENST00000607520 MBNL2Q5VZF2 373 aaKnown RBP4.39□□□□□ -1.71
SCARNA15-201ENST00000607520 OR4C13Q8NGP0 309 aa4.39□□□□□ -1.71
SCARNA15-201ENST00000607520 OR2T6Q8NHC8 308 aa4.39□□□□□ -1.71
SCARNA15-201ENST00000607520 PCNPQ8WW12 178 aaKnown RBP4.39□□□□□ -1.71
SCARNA15-201ENST00000607520 KLHDC3Q9BQ90 382 aa4.39□□□□□ -1.71
SCARNA15-201ENST00000607520 TREM1Q9NP99 234 aa4.39□□□□□ -1.71
SCARNA15-201ENST00000607520 FREM3P0C091 2139 aa4.39□□□□□ -1.71
SCARNA15-201ENST00000607520 M0QYG6 137 aa4.39□□□□□ -1.71
SCARNA15-201ENST00000607520 KNG1P01042 644 aa4.39□□□□□ -1.71
SCARNA15-201ENST00000607520 PRH1P02810 166 aa4.39□□□□□ -1.71
SCARNA15-201ENST00000607520 THY1P04216 161 aa4.39□□□□□ -1.71
SCARNA15-201ENST00000607520 MSMBP08118 114 aa4.39□□□□□ -1.71
SCARNA15-201ENST00000607520 FAM106CPP0CH98 169 aa4.39□□□□□ -1.71
SCARNA15-201ENST00000607520 KITLGP21583 273 aa4.39□□□□□ -1.71
SCARNA15-201ENST00000607520 LUMP51884 338 aaPredicted RBP4.39□□□□□ -1.71
SCARNA15-201ENST00000607520 RAG2P55895 527 aa4.39□□□□□ -1.71
SCARNA15-201ENST00000607520 COL10A1Q03692 680 aa4.39□□□□□ -1.71
SCARNA15-201ENST00000607520 PDZK1IP1Q13113 114 aa4.39□□□□□ -1.71
SCARNA15-201ENST00000607520 SNAI3Q3KNW1 292 aa4.39□□□□□ -1.71
SCARNA15-201ENST00000607520 ACTBL2Q562R1 376 aa4.39□□□□□ -1.71
SCARNA15-201ENST00000607520 FAAP20Q6NZ36 180 aa4.39□□□□□ -1.71
SCARNA15-201ENST00000607520 TGIF2LYQ8IUE0 185 aa4.39□□□□□ -1.71
SCARNA15-201ENST00000607520 TGIF2LXQ8IUE1 241 aa4.39□□□□□ -1.71
SCARNA15-201ENST00000607520 SPAG16Q8N0X2 631 aa4.39□□□□□ -1.71
SCARNA15-201ENST00000607520 MAPK1IP1LQ8NDC0 245 aa4.39□□□□□ -1.71
SCARNA15-201ENST00000607520 ZNF680Q8NEM1 530 aa4.39□□□□□ -1.71
SCARNA15-201ENST00000607520 MRGPRDQ8TDS7 321 aa4.39□□□□□ -1.71
SCARNA15-201ENST00000607520 SECTM1Q8WVN6 248 aa4.39□□□□□ -1.71
SCARNA15-201ENST00000607520 YIPF5Q969M3 257 aa4.39□□□□□ -1.71
SCARNA15-201ENST00000607520 GSX2Q9BZM3 304 aa4.39□□□□□ -1.71
SCARNA15-201ENST00000607520 EHFQ9NZC4 300 aa4.39□□□□□ -1.71
SCARNA15-201ENST00000607520 MEX3AA1L020 520 aaKnown RBP4.39□□□□□ -1.71
SCARNA15-201ENST00000607520 LEUTXA8MZ59 168 aa4.39□□□□□ -1.71
SCARNA15-201ENST00000607520 SDCBPO00560 298 aaPredicted RBP4.39□□□□□ -1.71
SCARNA15-201ENST00000607520 SHOXO15266 292 aa4.39□□□□□ -1.71
SCARNA15-201ENST00000607520 XRCC3O43542 346 aa4.39□□□□□ -1.71
SCARNA15-201ENST00000607520 PDCD6O75340 191 aa4.39□□□□□ -1.71
SCARNA15-201ENST00000607520 TUSC2O75896 110 aa4.39□□□□□ -1.71
SCARNA15-201ENST00000607520 SIX6O95475 246 aa4.39□□□□□ -1.71
SCARNA15-201ENST00000607520 SCGB1D2O95969 90 aa4.39□□□□□ -1.71
SCARNA15-201ENST00000607520 CST4P01036 141 aa4.39□□□□□ -1.71
SCARNA15-201ENST00000607520 TTRP02766 147 aa4.39□□□□□ -1.71
SCARNA15-201ENST00000607520 GIPP09681 153 aaPredicted RBP4.39□□□□□ -1.71
SCARNA15-201ENST00000607520 ADRA2CP18825 462 aa4.39□□□□□ -1.71
SCARNA15-201ENST00000607520 AKR1D1P51857 326 aa4.39□□□□□ -1.71
SCARNA15-201ENST00000607520 TAS2R31P59538 309 aa4.39□□□□□ -1.71
SCARNA15-201ENST00000607520 TNK1Q13470 666 aa4.39□□□□□ -1.71
SCARNA15-201ENST00000607520 ELP2Q6IA86 826 aa4.39□□□□□ -1.71
SCARNA15-201ENST00000607520 ALKAL2Q6UX46 152 aa4.39□□□□□ -1.71
SCARNA15-201ENST00000607520 ZNF561Q8N587 486 aa4.39□□□□□ -1.71
SCARNA15-201ENST00000607520 RNF138Q8WVD3 245 aa4.39□□□□□ -1.71
SCARNA15-201ENST00000607520 PATZ1Q9HBE1 687 aaKnown RBP4.39□□□□□ -1.71
SCARNA15-201ENST00000607520 CHD9Q3L8U1 2897 aa4.39□□□□□ -1.71
SCARNA15-201ENST00000607520 PLCE1Q9P212 2302 aa4.38□□□□□ -1.71
SCARNA15-201ENST00000607520 C19orf84I3L1E1 186 aa4.38□□□□□ -1.71
SCARNA15-201ENST00000607520 SLC17A2O00624 439 aa4.38□□□□□ -1.71
SCARNA15-201ENST00000607520 CGAP01215 116 aa4.38□□□□□ -1.71
SCARNA15-201ENST00000607520 S100A11P31949 105 aa4.38□□□□□ -1.71
SCARNA15-201ENST00000607520 HGFACQ04756 655 aa4.38□□□□□ -1.71
SCARNA15-201ENST00000607520 PDCD1Q15116 288 aa4.38□□□□□ -1.71
SCARNA15-201ENST00000607520 S100A7AQ86SG5 101 aa4.38□□□□□ -1.71
SCARNA15-201ENST00000607520 NAA40Q86UY6 237 aa4.38□□□□□ -1.71
SCARNA15-201ENST00000607520 LRP11Q86VZ4 500 aa4.38□□□□□ -1.71
SCARNA15-201ENST00000607520 LRRC75AQ8NAA5 344 aa4.38□□□□□ -1.71
SCARNA15-201ENST00000607520 TCTEX1D2Q8WW35 142 aa4.38□□□□□ -1.71
SCARNA15-201ENST00000607520 MARS2Q96GW9 593 aaKnown RBP4.38□□□□□ -1.71
SCARNA15-201ENST00000607520 SEC22AQ96IW7 307 aa4.38□□□□□ -1.71
SCARNA15-201ENST00000607520 SDHCQ99643 169 aaPredicted RBP4.38□□□□□ -1.71
SCARNA15-201ENST00000607520 SCPEP1Q9HB40 452 aa4.38□□□□□ -1.71
SCARNA15-201ENST00000607520 SDHAF2Q9NX18 166 aa4.38□□□□□ -1.71
SCARNA15-201ENST00000607520 IGKV1D-43A0A0B4J1Z2 117 aa4.38□□□□□ -1.71
SCARNA15-201ENST00000607520 CEACAM18A8MTB9 384 aa4.38□□□□□ -1.71
SCARNA15-201ENST00000607520 SNRPGP15A8MWD9 76 aa4.38□□□□□ -1.71
SCARNA15-201ENST00000607520 ZNF728P0DKX0 622 aa4.38□□□□□ -1.71
SCARNA15-201ENST00000607520 PTHLHP12272 177 aa4.38□□□□□ -1.71
SCARNA15-201ENST00000607520 ZNF14P17017 642 aaPredicted RBP4.38□□□□□ -1.71
SCARNA15-201ENST00000607520 GNB1P62873 340 aa4.38□□□□□ -1.71
SCARNA15-201ENST00000607520 IL13RA2Q14627 380 aa4.38□□□□□ -1.71
SCARNA15-201ENST00000607520 SEM1Q6ZVN7 128 aa4.38□□□□□ -1.71
SCARNA15-201ENST00000607520 LINC00596Q86U02 117 aa4.38□□□□□ -1.71
SCARNA15-201ENST00000607520 NRGNQ92686 78 aa4.38□□□□□ -1.71
SCARNA15-201ENST00000607520 DCTN5Q9BTE1 182 aa4.38□□□□□ -1.71
SCARNA15-201ENST00000607520 NPFFR1Q9GZQ6 430 aa4.38□□□□□ -1.71
SCARNA15-201ENST00000607520 J3QLI3 93 aa4.38□□□□□ -1.71
SCARNA15-201ENST00000607520 RGS13O14921 159 aa4.38□□□□□ -1.71
SCARNA15-201ENST00000607520 TCF21O43680 179 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms