RNA–Protein interactions for RNA: ENST00000606749.1

CUX1-219, Transcript of cut like homeobox 1, humanhuman

TSL 4

Gene CUX1, Length 601 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-219ENST00000606749 C9orf152Q5JTZ5 239 aa6.05□□□□□ -1.44
CUX1-219ENST00000606749 XAF1Q6GPH4 301 aa6.05□□□□□ -1.44
CUX1-219ENST00000606749 RPL22L1Q6P5R6 122 aaKnown RBP6.05□□□□□ -1.44
CUX1-219ENST00000606749 SLC16A12Q6ZSM3 486 aa6.05□□□□□ -1.44
CUX1-219ENST00000606749 OSR2Q8N2R0 312 aa6.05□□□□□ -1.44
CUX1-219ENST00000606749 DRAM1Q8N682 238 aa6.05□□□□□ -1.44
CUX1-219ENST00000606749 OR4X2Q8NGF9 303 aa6.05□□□□□ -1.44
CUX1-219ENST00000606749 RFESDQ8TAC1 157 aa6.05□□□□□ -1.44
CUX1-219ENST00000606749 PLPPR1Q8TBJ4 325 aa6.05□□□□□ -1.44
CUX1-219ENST00000606749 HAVCR2Q8TDQ0 301 aa6.05□□□□□ -1.44
CUX1-219ENST00000606749 MRGPRDQ8TDS7 321 aa6.05□□□□□ -1.44
CUX1-219ENST00000606749 GPR148Q8TDV2 347 aa6.05□□□□□ -1.44
CUX1-219ENST00000606749 TNFAIP8L1Q8WVP5 186 aa6.05□□□□□ -1.44
CUX1-219ENST00000606749 APH1BQ8WW43 257 aa6.05□□□□□ -1.44
CUX1-219ENST00000606749 TOMM40LQ969M1 308 aa6.05□□□□□ -1.44
CUX1-219ENST00000606749 CPNE2Q96FN4 548 aaPredicted RBP6.05□□□□□ -1.44
CUX1-219ENST00000606749 GPER1Q99527 375 aa6.05□□□□□ -1.44
CUX1-219ENST00000606749 JAM3Q9BX67 310 aa6.05□□□□□ -1.44
CUX1-219ENST00000606749 IFT22Q9H7X7 185 aa6.05□□□□□ -1.44
CUX1-219ENST00000606749 S100A14Q9HCY8 104 aa6.05□□□□□ -1.44
CUX1-219ENST00000606749 FGF20Q9NP95 211 aaPredicted RBP6.05□□□□□ -1.44
CUX1-219ENST00000606749 TMEM138Q9NPI0 162 aa6.05□□□□□ -1.44
CUX1-219ENST00000606749 PCDHB16Q9NRJ7 776 aa6.05□□□□□ -1.44
CUX1-219ENST00000606749 TAS2R4Q9NYW5 299 aa6.05□□□□□ -1.44
CUX1-219ENST00000606749 ZNF581Q9P0T4 197 aa6.05□□□□□ -1.44
CUX1-219ENST00000606749 ING4Q9UNL4 249 aa6.05□□□□□ -1.44
CUX1-219ENST00000606749 AMMECR1Q9Y4X0 333 aaPredicted RBP6.05□□□□□ -1.44
CUX1-219ENST00000606749 SIRT4Q9Y6E7 314 aaPredicted RBP6.05□□□□□ -1.44
CUX1-219ENST00000606749 A0A1W2PPI3 338 aa6.04□□□□□ -1.44
CUX1-219ENST00000606749 OGG1O15527 345 aa6.04□□□□□ -1.44
CUX1-219ENST00000606749 WBP4O75554 376 aaKnown RBP6.04□□□□□ -1.44
CUX1-219ENST00000606749 IL1AP01583 271 aa6.04□□□□□ -1.44
CUX1-219ENST00000606749 PF4P02776 101 aa6.04□□□□□ -1.44
CUX1-219ENST00000606749 CD2P06729 351 aa6.04□□□□□ -1.44
CUX1-219ENST00000606749 SNRNP70P08621 437 aaKnown RBP6.04□□□□□ -1.44
CUX1-219ENST00000606749 GZMHP20718 246 aa6.04□□□□□ -1.44
CUX1-219ENST00000606749 DCKP27707 260 aa6.04□□□□□ -1.44
CUX1-219ENST00000606749 SLC35A2P78381 396 aa6.04□□□□□ -1.44
CUX1-219ENST00000606749 MADCAM1Q13477 382 aa6.04□□□□□ -1.44
CUX1-219ENST00000606749 HNF4GQ14541 408 aa6.04□□□□□ -1.44
CUX1-219ENST00000606749 LTC4SQ16873 150 aa6.04□□□□□ -1.44
CUX1-219ENST00000606749 NHLRC3Q5JS37 347 aa6.04□□□□□ -1.44
CUX1-219ENST00000606749 OR2G6Q5TZ20 316 aa6.04□□□□□ -1.44
CUX1-219ENST00000606749 ZNF329Q86UD4 541 aa6.04□□□□□ -1.44
CUX1-219ENST00000606749 OR8H3Q8N146 312 aa6.04□□□□□ -1.44
CUX1-219ENST00000606749 PQLC1Q8N2U9 271 aa6.04□□□□□ -1.44
CUX1-219ENST00000606749 C5orf56Q8N8D9 126 aa6.04□□□□□ -1.44
CUX1-219ENST00000606749 SUMF2Q8NBJ7 301 aa6.04□□□□□ -1.44
CUX1-219ENST00000606749 OR10A7Q8NGE5 316 aa6.04□□□□□ -1.44
CUX1-219ENST00000606749 OR56B4Q8NH76 319 aa6.04□□□□□ -1.44
CUX1-219ENST00000606749 TMEM106AQ96A25 262 aa6.04□□□□□ -1.44
CUX1-219ENST00000606749 RCC1LQ96I51 464 aaKnown RBP6.04□□□□□ -1.44
CUX1-219ENST00000606749 DPCDQ9BVM2 203 aaPredicted RBP6.04□□□□□ -1.44
CUX1-219ENST00000606749 FAM192AQ9GZU8 254 aa6.04□□□□□ -1.44
CUX1-219ENST00000606749 METTL9Q9H1A3 318 aa6.04□□□□□ -1.44
CUX1-219ENST00000606749 BABAM2Q9NXR7 383 aa6.04□□□□□ -1.44
CUX1-219ENST00000606749 IL36GQ9NZH8 169 aa6.04□□□□□ -1.44
CUX1-219ENST00000606749 ST3GAL6Q9Y274 331 aa6.04□□□□□ -1.44
CUX1-219ENST00000606749 ZNF281Q9Y2X9 895 aa6.04□□□□□ -1.44
CUX1-219ENST00000606749 MOB4Q9Y3A3 225 aa6.04□□□□□ -1.44
CUX1-219ENST00000606749 HSPE1-MOB4S4R3N1 261 aa6.04□□□□□ -1.44
CUX1-219ENST00000606749 A0A1W2PPE3 182 aa6.03□□□□□ -1.44
CUX1-219ENST00000606749 PSMB11A5LHX3 300 aa6.03□□□□□ -1.44
CUX1-219ENST00000606749 C15orf65H3BRN8 121 aa6.03□□□□□ -1.44
CUX1-219ENST00000606749 GEMIN2O14893 280 aaKnown RBP6.03□□□□□ -1.44
CUX1-219ENST00000606749 OR7C1O76099 320 aaPredicted RBP6.03□□□□□ -1.44
CUX1-219ENST00000606749 MPIG6BO95866 241 aa6.03□□□□□ -1.44
CUX1-219ENST00000606749 IGKV1D-33P01593 117 aa6.03□□□□□ -1.44
CUX1-219ENST00000606749 IGKV1-33P01594 117 aa6.03□□□□□ -1.44
CUX1-219ENST00000606749 CSTBP04080 98 aaKnown RBP6.03□□□□□ -1.44
CUX1-219ENST00000606749 TMEM11P17152 192 aa6.03□□□□□ -1.44
CUX1-219ENST00000606749 BDKRB2P30411 391 aa6.03□□□□□ -1.44
CUX1-219ENST00000606749 SSTR5P35346 364 aa6.03□□□□□ -1.44
CUX1-219ENST00000606749 ZNF93P35789 620 aaPredicted RBP6.03□□□□□ -1.44
CUX1-219ENST00000606749 GNG10P50151 68 aa6.03□□□□□ -1.44
CUX1-219ENST00000606749 RAB7AP51149 207 aa6.03□□□□□ -1.44
CUX1-219ENST00000606749 RBM11P57052 281 aaKnown RBP6.03□□□□□ -1.44
CUX1-219ENST00000606749 KRTAP10-11P60412 298 aa6.03□□□□□ -1.44
CUX1-219ENST00000606749 PPP3R1P63098 170 aa6.03□□□□□ -1.44
CUX1-219ENST00000606749 EBI3Q14213 229 aa6.03□□□□□ -1.44
CUX1-219ENST00000606749 HES1Q14469 280 aa6.03□□□□□ -1.44
CUX1-219ENST00000606749 KHDC1LQ5JSQ8 128 aa6.03□□□□□ -1.44
CUX1-219ENST00000606749 DDI2Q5TDH0 399 aa6.03□□□□□ -1.44
CUX1-219ENST00000606749 TMPRSS11AQ6ZMR5 421 aa6.03□□□□□ -1.44
CUX1-219ENST00000606749 OR10X1Q8NGY0 326 aa6.03□□□□□ -1.44
CUX1-219ENST00000606749 OR52N1Q8NH53 320 aa6.03□□□□□ -1.44
CUX1-219ENST00000606749 CHPT1Q8WUD6 406 aa6.03□□□□□ -1.44
CUX1-219ENST00000606749 GHSRQ92847 366 aa6.03□□□□□ -1.44
CUX1-219ENST00000606749 ORAI1Q96D31 301 aa6.03□□□□□ -1.44
CUX1-219ENST00000606749 NOL4LQ96MY1 436 aaPredicted RBP6.03□□□□□ -1.44
CUX1-219ENST00000606749 PAK1IP1Q9NWT1 392 aaPredicted RBP6.03□□□□□ -1.44
CUX1-219ENST00000606749 IGHV1-3A0A0C4DH29 117 aa6.02□□□□□ -1.45
CUX1-219ENST00000606749 TRBV5-5A0A0J9YX44 114 aa6.02□□□□□ -1.45
CUX1-219ENST00000606749 TMEM30CPA0ZSE6 113 aa6.02□□□□□ -1.45
CUX1-219ENST00000606749 LINC01548A6NM66 108 aa6.02□□□□□ -1.45
CUX1-219ENST00000606749 K7EIL1 84 aa6.02□□□□□ -1.45
CUX1-219ENST00000606749 FGF16O43320 207 aa6.02□□□□□ -1.45
CUX1-219ENST00000606749 ORC5O43913 435 aa6.02□□□□□ -1.45
CUX1-219ENST00000606749 GPX5O75715 221 aa6.02□□□□□ -1.45
CUX1-219ENST00000606749 DUS4LO95620 317 aaKnown RBP6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms