RNA–Protein interactions for RNA: ENST00000606499.1

MSH6-211, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 833 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-211ENST00000606499 MMP26Q9NRE1 261 aa6.34□□□□□ -1.39
MSH6-211ENST00000606499 PTTG2Q9NZH5 202 aa6.34□□□□□ -1.39
MSH6-211ENST00000606499 A3GALT2U3KPV4 340 aa6.34□□□□□ -1.39
MSH6-211ENST00000606499 TRBV23-1A0A0A0MS06 115 aa6.33□□□□□ -1.4
MSH6-211ENST00000606499 PPIAL4CA0A0B4J2A2 164 aa6.33□□□□□ -1.4
MSH6-211ENST00000606499 A0A0G2JMP0 313 aa6.33□□□□□ -1.4
MSH6-211ENST00000606499 A0A0X1KG70 313 aa6.33□□□□□ -1.4
MSH6-211ENST00000606499 MEIS3P1A6NDR6 274 aa6.33□□□□□ -1.4
MSH6-211ENST00000606499 H3BUI4 141 aa6.33□□□□□ -1.4
MSH6-211ENST00000606499 ENSAO43768 121 aaKnown RBP6.33□□□□□ -1.4
MSH6-211ENST00000606499 SSX5O60225 188 aa6.33□□□□□ -1.4
MSH6-211ENST00000606499 ECDO95905 644 aaPredicted RBP6.33□□□□□ -1.4
MSH6-211ENST00000606499 NAPSAO96009 420 aa6.33□□□□□ -1.4
MSH6-211ENST00000606499 TGFAP01135 160 aa6.33□□□□□ -1.4
MSH6-211ENST00000606499 MT-ND4P03905 459 aa6.33□□□□□ -1.4
MSH6-211ENST00000606499 FCGR3AP08637 254 aa6.33□□□□□ -1.4
MSH6-211ENST00000606499 GSTP1P09211 210 aaKnown RBP6.33□□□□□ -1.4
MSH6-211ENST00000606499 CD3GP09693 182 aa6.33□□□□□ -1.4
MSH6-211ENST00000606499 PPIAL4GP0DN37 164 aa6.33□□□□□ -1.4
MSH6-211ENST00000606499 CCL3L1P16619 93 aa6.33□□□□□ -1.4
MSH6-211ENST00000606499 RCC1P18754 421 aaPredicted RBP6.33□□□□□ -1.4
MSH6-211ENST00000606499 ERP29P30040 261 aaKnown RBP6.33□□□□□ -1.4
MSH6-211ENST00000606499 TALDO1P37837 337 aa6.33□□□□□ -1.4
MSH6-211ENST00000606499 GZMKP49863 264 aa6.33□□□□□ -1.4
MSH6-211ENST00000606499 PAX5Q02548 391 aa6.33□□□□□ -1.4
MSH6-211ENST00000606499 GUCA2AQ02747 115 aa6.33□□□□□ -1.4
MSH6-211ENST00000606499 MEF2CQ06413 473 aaPredicted RBP6.33□□□□□ -1.4
MSH6-211ENST00000606499 ARFRP1Q13795 201 aa6.33□□□□□ -1.4
MSH6-211ENST00000606499 RNASE12Q5GAN4 147 aaKnown RBP6.33□□□□□ -1.4
MSH6-211ENST00000606499 HACD4Q5VWC8 232 aa6.33□□□□□ -1.4
MSH6-211ENST00000606499 CD276Q5ZPR3 534 aa6.33□□□□□ -1.4
MSH6-211ENST00000606499 C5orf24Q7Z6I8 188 aa6.33□□□□□ -1.4
MSH6-211ENST00000606499 TRAPPC6BQ86SZ2 158 aa6.33□□□□□ -1.4
MSH6-211ENST00000606499 GLCCI1Q86VQ1 547 aa6.33□□□□□ -1.4
MSH6-211ENST00000606499 SNX29P2Q8IUI4 249 aa6.33□□□□□ -1.4
MSH6-211ENST00000606499 GAPTQ8N292 157 aa6.33□□□□□ -1.4
MSH6-211ENST00000606499 LY6G5BQ8NDX9 201 aa6.33□□□□□ -1.4
MSH6-211ENST00000606499 OR4M2Q8NGB6 313 aa6.33□□□□□ -1.4
MSH6-211ENST00000606499 OR6Q1Q8NGQ2 317 aa6.33□□□□□ -1.4
MSH6-211ENST00000606499 C8orf46Q8TAG6 207 aa6.33□□□□□ -1.4
MSH6-211ENST00000606499 UBALD1Q8TB05 177 aa6.33□□□□□ -1.4
MSH6-211ENST00000606499 SETD6Q8TBK2 473 aa6.33□□□□□ -1.4
MSH6-211ENST00000606499 MRGPRDQ8TDS7 321 aa6.33□□□□□ -1.4
MSH6-211ENST00000606499 MAFIPQ8WZ33 124 aa6.33□□□□□ -1.4
MSH6-211ENST00000606499 DIRAS2Q96HU8 199 aa6.33□□□□□ -1.4
MSH6-211ENST00000606499 C18orf12Q96KH6 178 aa6.33□□□□□ -1.4
MSH6-211ENST00000606499 WDFY2Q96P53 400 aa6.33□□□□□ -1.4
MSH6-211ENST00000606499 SMR3AQ99954 134 aa6.33□□□□□ -1.4
MSH6-211ENST00000606499 CMSS1Q9BQ75 279 aaKnown RBP6.33□□□□□ -1.4
MSH6-211ENST00000606499 NUDT16L1Q9BRJ7 211 aaKnown RBP6.33□□□□□ -1.4
MSH6-211ENST00000606499 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP6.33□□□□□ -1.4
MSH6-211ENST00000606499 HIF1ANQ9NWT6 349 aa6.33□□□□□ -1.4
MSH6-211ENST00000606499 ONECUT1Q9UBC0 465 aa6.33□□□□□ -1.4
MSH6-211ENST00000606499 ADAM30Q9UKF2 790 aa6.33□□□□□ -1.4
MSH6-211ENST00000606499 MRPS7Q9Y2R9 242 aaKnown RBP6.33□□□□□ -1.4
MSH6-211ENST00000606499 POLR3KQ9Y2Y1 108 aaPredicted RBP6.33□□□□□ -1.4
MSH6-211ENST00000606499 LINC00312Q9Y6C7 94 aa6.33□□□□□ -1.4
MSH6-211ENST00000606499 ARHGAP32A7KAX9 2087 aa6.33□□□□□ -1.4
MSH6-211ENST00000606499 ACANP16112 2415 aa6.33□□□□□ -1.4
MSH6-211ENST00000606499 TRGV10A0A0A0MS01 117 aa6.32□□□□□ -1.4
MSH6-211ENST00000606499 TRAV20A0A0B4J274 112 aa6.32□□□□□ -1.4
MSH6-211ENST00000606499 KIR2DS1A0A191URI9 304 aa6.32□□□□□ -1.4
MSH6-211ENST00000606499 hADV38S2A0JD32 116 aa6.32□□□□□ -1.4
MSH6-211ENST00000606499 MEIOCA2RUB1 952 aa6.32□□□□□ -1.4
MSH6-211ENST00000606499 FUOMA2VDF0 154 aa6.32□□□□□ -1.4
MSH6-211ENST00000606499 SERPINE3A8MV23 424 aa6.32□□□□□ -1.4
MSH6-211ENST00000606499 C12orf77C9JDV5 145 aa6.32□□□□□ -1.4
MSH6-211ENST00000606499 CA11O75493 328 aa6.32□□□□□ -1.4
MSH6-211ENST00000606499 HLA-DQB1P01920 261 aa6.32□□□□□ -1.4
MSH6-211ENST00000606499 LIPFP07098 398 aa6.32□□□□□ -1.4
MSH6-211ENST00000606499 INHBBP09529 407 aa6.32□□□□□ -1.4
MSH6-211ENST00000606499 S100A5P33763 92 aa6.32□□□□□ -1.4
MSH6-211ENST00000606499 SSTR5P35346 364 aa6.32□□□□□ -1.4
MSH6-211ENST00000606499 MNDAP41218 407 aa6.32□□□□□ -1.4
MSH6-211ENST00000606499 DVL1P1P54792 670 aaPredicted RBP6.32□□□□□ -1.4
MSH6-211ENST00000606499 DLX1P56177 255 aa6.32□□□□□ -1.4
MSH6-211ENST00000606499 GNG2P59768 71 aa6.32□□□□□ -1.4
MSH6-211ENST00000606499 ERVFRD-1P60508 538 aa6.32□□□□□ -1.4
MSH6-211ENST00000606499 ARF6P62330 175 aa6.32□□□□□ -1.4
MSH6-211ENST00000606499 MRPS15P82914 257 aaKnown RBP6.32□□□□□ -1.4
MSH6-211ENST00000606499 PRB3Q04118 309 aaPredicted RBP6.32□□□□□ -1.4
MSH6-211ENST00000606499 IL18Q14116 193 aa6.32□□□□□ -1.4
MSH6-211ENST00000606499 ARL6IP1Q15041 203 aa6.32□□□□□ -1.4
MSH6-211ENST00000606499 DCAF12L2Q5VW00 463 aa6.32□□□□□ -1.4
MSH6-211ENST00000606499 CYB5R2Q6BCY4 276 aa6.32□□□□□ -1.4
MSH6-211ENST00000606499 CCDC190Q86UF4 302 aa6.32□□□□□ -1.4
MSH6-211ENST00000606499 PRR18Q8N4B5 295 aa6.32□□□□□ -1.4
MSH6-211ENST00000606499 TMEM186Q96B77 213 aa6.32□□□□□ -1.4
MSH6-211ENST00000606499 ZNF714Q96N38 554 aa6.32□□□□□ -1.4
MSH6-211ENST00000606499 ABHD1Q96SE0 405 aa6.32□□□□□ -1.4
MSH6-211ENST00000606499 TMUB1Q9BVT8 246 aa6.32□□□□□ -1.4
MSH6-211ENST00000606499 CALYQ9NYX4 217 aa6.32□□□□□ -1.4
MSH6-211ENST00000606499 LPAR3Q9UBY5 353 aa6.32□□□□□ -1.4
MSH6-211ENST00000606499 ZNF230Q9UIE0 474 aaPredicted RBP6.32□□□□□ -1.4
MSH6-211ENST00000606499 TRAPPC2LQ9UL33 140 aa6.32□□□□□ -1.4
MSH6-211ENST00000606499 INSIG2Q9Y5U4 225 aa6.32□□□□□ -1.4
MSH6-211ENST00000606499 V9GYH0 126 aa6.32□□□□□ -1.4
MSH6-211ENST00000606499 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.32□□□□□ -1.41e-7■■□□□ 11.8
MSH6-211ENST00000606499 DOCK11Q5JSL3 2073 aa6.31□□□□□ -1.4
MSH6-211ENST00000606499 FABP12A6NFH5 140 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms