RNA–Protein interactions for RNA: ENST00000602655.5

PPFIA3-206, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 3,493 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-206ENST00000602655 MFGE8Q08431 387 aaPredicted RBP13.36□□□□□ -0.27
PPFIA3-206ENST00000602655 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.36□□□□□ -0.27
PPFIA3-206ENST00000602655 C1orf140Q5VVS0 124 aa13.36□□□□□ -0.27
PPFIA3-206ENST00000602655 ABLIM2Q6H8Q1 611 aa13.36□□□□□ -0.27
PPFIA3-206ENST00000602655 ATG4DQ86TL0 474 aaPredicted RBP13.36□□□□□ -0.27
PPFIA3-206ENST00000602655 OR4C5Q8NGB2 326 aa13.36□□□□□ -0.27
PPFIA3-206ENST00000602655 CYYR1Q96J86 154 aa13.36□□□□□ -0.27
PPFIA3-206ENST00000602655 KLF7O75840 302 aaPredicted RBP13.36□□□□□ -0.27
PPFIA3-206ENST00000602655 MT-CO3P00414 261 aa13.36□□□□□ -0.27
PPFIA3-206ENST00000602655 CD59P13987 128 aa13.36□□□□□ -0.27
PPFIA3-206ENST00000602655 FXYD4P59646 89 aa13.36□□□□□ -0.27
PPFIA3-206ENST00000602655 DCAF7P61962 342 aa13.36□□□□□ -0.27
PPFIA3-206ENST00000602655 GABREP78334 506 aa13.36□□□□□ -0.27
PPFIA3-206ENST00000602655 TRIP6Q15654 476 aaKnown RBP13.36□□□□□ -0.27
PPFIA3-206ENST00000602655 ABCA11PQ4W5N1 156 aa13.36□□□□□ -0.27
PPFIA3-206ENST00000602655 LCN15Q6UWW0 184 aa13.36□□□□□ -0.27
PPFIA3-206ENST00000602655 NUP54Q7Z3B4 507 aa13.36□□□□□ -0.27
PPFIA3-206ENST00000602655 CMTM1Q8IZ96 169 aa13.36□□□□□ -0.27
PPFIA3-206ENST00000602655 RNASEH2CQ8TDP1 164 aaKnown RBP13.36□□□□□ -0.27
PPFIA3-206ENST00000602655 CIB3Q96Q77 187 aaPredicted RBP13.36□□□□□ -0.27
PPFIA3-206ENST00000602655 MSL2Q9HCI7 577 aa13.36□□□□□ -0.27
PPFIA3-206ENST00000602655 P4HTMQ9NXG6 502 aa13.36□□□□□ -0.27
PPFIA3-206ENST00000602655 VAX2Q9UIW0 290 aa13.36□□□□□ -0.27
PPFIA3-206ENST00000602655 COL12A1Q99715 3063 aa13.36□□□□□ -0.27
PPFIA3-206ENST00000602655 FAM166BA8MTA8 275 aa13.36□□□□□ -0.27
PPFIA3-206ENST00000602655 CD55P08174 381 aa13.36□□□□□ -0.27
PPFIA3-206ENST00000602655 ATP6V0CP27449 155 aa13.36□□□□□ -0.27
PPFIA3-206ENST00000602655 SNU13P55769 128 aaKnown RBP13.36□□□□□ -0.27
PPFIA3-206ENST00000602655 MRPS34P82930 218 aaKnown RBP13.36□□□□□ -0.27
PPFIA3-206ENST00000602655 ENDOGQ14249 297 aaKnown RBP13.36□□□□□ -0.27
PPFIA3-206ENST00000602655 SLC18B1Q6NT16 456 aa13.36□□□□□ -0.27
PPFIA3-206ENST00000602655 C6orf15Q6UXA7 325 aaPredicted RBP13.36□□□□□ -0.27
PPFIA3-206ENST00000602655 CDC20BQ86Y33 519 aa13.36□□□□□ -0.27
PPFIA3-206ENST00000602655 OR52N4Q8NGI2 321 aa13.36□□□□□ -0.27
PPFIA3-206ENST00000602655 PCGF1Q9BSM1 259 aa13.36□□□□□ -0.27
PPFIA3-206ENST00000602655 ARV1Q9H2C2 271 aa13.36□□□□□ -0.27
PPFIA3-206ENST00000602655 ZNF107Q9UII5 783 aaPredicted RBP13.36□□□□□ -0.27
PPFIA3-206ENST00000602655 RHBDD3Q9Y3P4 386 aa13.36□□□□□ -0.27
PPFIA3-206ENST00000602655 A0A0G2JMM0 328 aa13.35□□□□□ -0.27
PPFIA3-206ENST00000602655 LOC107986453A0A1B0GWG9 222 aa13.35□□□□□ -0.27
PPFIA3-206ENST00000602655 A0A1W2PPB8 328 aa13.35□□□□□ -0.27
PPFIA3-206ENST00000602655 A0A1W2PRS3 328 aa13.35□□□□□ -0.27
PPFIA3-206ENST00000602655 KIR3DP1A8MWS1 328 aa13.35□□□□□ -0.27
PPFIA3-206ENST00000602655 ALG1L2C9J202 215 aa13.35□□□□□ -0.27
PPFIA3-206ENST00000602655 SOCS1O15524 211 aa13.35□□□□□ -0.27
PPFIA3-206ENST00000602655 NXPH3O95157 252 aa13.35□□□□□ -0.27
PPFIA3-206ENST00000602655 OPN1MWP04001 364 aa13.35□□□□□ -0.27
PPFIA3-206ENST00000602655 OPN1MW2P0DN77 364 aa13.35□□□□□ -0.27
PPFIA3-206ENST00000602655 OPN1MW3P0DN78 364 aa13.35□□□□□ -0.27
PPFIA3-206ENST00000602655 KCTD18Q6PI47 426 aaPredicted RBP13.35□□□□□ -0.27
PPFIA3-206ENST00000602655 TXN2Q99757 166 aa13.35□□□□□ -0.27
PPFIA3-206ENST00000602655 RTBDNQ9BSG5 229 aaPredicted RBP13.35□□□□□ -0.27
PPFIA3-206ENST00000602655 FAM24AA6NFZ4 105 aa13.35□□□□□ -0.27
PPFIA3-206ENST00000602655 VSTM2BA6NLU5 285 aa13.35□□□□□ -0.27
PPFIA3-206ENST00000602655 TMEM210A6NLX4 147 aa13.35□□□□□ -0.27
PPFIA3-206ENST00000602655 CDC14BO60729 498 aa13.35□□□□□ -0.27
PPFIA3-206ENST00000602655 CST7O76096 145 aa13.35□□□□□ -0.27
PPFIA3-206ENST00000602655 FPR2P25090 351 aa13.35□□□□□ -0.27
PPFIA3-206ENST00000602655 MEX3BQ6ZN04 569 aaKnown RBP13.35□□□□□ -0.27
PPFIA3-206ENST00000602655 ZNF2Q9BSG1 426 aaPredicted RBP13.35□□□□□ -0.27
PPFIA3-206ENST00000602655 TCFL5Q9UL49 500 aa13.35□□□□□ -0.27
PPFIA3-206ENST00000602655 A0A1W2PNV4 684 aa13.34□□□□□ -0.27
PPFIA3-206ENST00000602655 ARPC3O15145 178 aa13.34□□□□□ -0.27
PPFIA3-206ENST00000602655 CDAP32320 146 aa13.34□□□□□ -0.27
PPFIA3-206ENST00000602655 RUNX1Q01196 453 aa13.34□□□□□ -0.27
PPFIA3-206ENST00000602655 MMDQ15546 238 aa13.34□□□□□ -0.27
PPFIA3-206ENST00000602655 Q6ZVH6 145 aa13.34□□□□□ -0.27
PPFIA3-206ENST00000602655 SLC35E3Q7Z769 313 aa13.34□□□□□ -0.27
PPFIA3-206ENST00000602655 ZNF709Q8N972 641 aa13.34□□□□□ -0.27
PPFIA3-206ENST00000602655 VN1R17PQ8TDU5 208 aa13.34□□□□□ -0.27
PPFIA3-206ENST00000602655 SPTBN1Q01082 2364 aaKnown RBP13.34□□□□□ -0.27
PPFIA3-206ENST00000602655 A0A1W2PNU3 283 aaPredicted RBP13.34□□□□□ -0.27
PPFIA3-206ENST00000602655 ZNF320A2RRD8 509 aa13.34□□□□□ -0.27
PPFIA3-206ENST00000602655 CEBPZOSA8MTT3 80 aa13.34□□□□□ -0.27
PPFIA3-206ENST00000602655 H7BYZ3 331 aa13.34□□□□□ -0.27
PPFIA3-206ENST00000602655 ZNF92Q03936 586 aa13.34□□□□□ -0.27
PPFIA3-206ENST00000602655 IL11RAQ14626 422 aa13.34□□□□□ -0.27
PPFIA3-206ENST00000602655 TSPO2Q5TGU0 170 aa13.34□□□□□ -0.27
PPFIA3-206ENST00000602655 OR5D18Q8NGL1 313 aa13.34□□□□□ -0.27
PPFIA3-206ENST00000602655 OR2AJ1Q8NGZ0 328 aa13.34□□□□□ -0.27
PPFIA3-206ENST00000602655 OR14L1PQ8NHC6 308 aa13.34□□□□□ -0.27
PPFIA3-206ENST00000602655 VAMP8Q9BV40 100 aa13.34□□□□□ -0.27
PPFIA3-206ENST00000602655 ZFP30Q9Y2G7 519 aa13.34□□□□□ -0.27
PPFIA3-206ENST00000602655 C9orf172C9J069 976 aa13.34□□□□□ -0.27
PPFIA3-206ENST00000602655 NPIPA5E9PKD4 350 aa13.34□□□□□ -0.27
PPFIA3-206ENST00000602655 CHRM2P08172 466 aa13.34□□□□□ -0.27
PPFIA3-206ENST00000602655 LYL1P12980 280 aa13.34□□□□□ -0.27
PPFIA3-206ENST00000602655 CCKARP32238 428 aa13.34□□□□□ -0.27
PPFIA3-206ENST00000602655 C17orf67Q0P5P2 114 aa13.34□□□□□ -0.27
PPFIA3-206ENST00000602655 ASPHD2Q6ICH7 369 aa13.34□□□□□ -0.27
PPFIA3-206ENST00000602655 DPPA3Q6W0C5 159 aa13.34□□□□□ -0.27
PPFIA3-206ENST00000602655 NFAM1Q8NET5 270 aaPredicted RBP13.34□□□□□ -0.27
PPFIA3-206ENST00000602655 OR13G1Q8NGZ3 307 aa13.34□□□□□ -0.27
PPFIA3-206ENST00000602655 ALKBH7Q9BT30 221 aaPredicted RBP13.34□□□□□ -0.27
PPFIA3-206ENST00000602655 KIAA1456Q9P272 454 aa13.34□□□□□ -0.27
PPFIA3-206ENST00000602655 NPIPA1Q9UND3 350 aa13.34□□□□□ -0.27
PPFIA3-206ENST00000602655 RBM7Q9Y580 266 aaKnown RBP13.34□□□□□ -0.27
PPFIA3-206ENST00000602655 PNMTP11086 282 aa13.33□□□□□ -0.27
PPFIA3-206ENST00000602655 ERASQ7Z444 233 aa13.33□□□□□ -0.27
PPFIA3-206ENST00000602655 SPACA9Q96E40 222 aaPredicted RBP13.33□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms