RNA–Protein interactions for RNA: ENST00000601981.5

UPF1-213, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 5

Gene UPF1, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-213ENST00000601981 IL5P05113 134 aa8.43□□□□□ -1.06
UPF1-213ENST00000601981 ACAA1P09110 424 aaPredicted RBP8.43□□□□□ -1.06
UPF1-213ENST00000601981 FUT3P21217 361 aa8.43□□□□□ -1.06
UPF1-213ENST00000601981 DTYMKP23919 212 aa8.43□□□□□ -1.06
UPF1-213ENST00000601981 GZMKP49863 264 aa8.43□□□□□ -1.06
UPF1-213ENST00000601981 RAB25P57735 213 aa8.43□□□□□ -1.06
UPF1-213ENST00000601981 TAS2R46P59540 309 aa8.43□□□□□ -1.06
UPF1-213ENST00000601981 RRAS2P62070 204 aaPredicted RBP8.43□□□□□ -1.06
UPF1-213ENST00000601981 VAX1Q5SQQ9 334 aa8.43□□□□□ -1.06
UPF1-213ENST00000601981 C11orf53Q8IXP5 236 aa8.43□□□□□ -1.06
UPF1-213ENST00000601981 BPIFB2Q8N4F0 458 aa8.43□□□□□ -1.06
UPF1-213ENST00000601981 GCSAMQ8N6F7 178 aa8.43□□□□□ -1.06
UPF1-213ENST00000601981 POC1AQ8NBT0 407 aa8.43□□□□□ -1.06
UPF1-213ENST00000601981 OR4S1Q8NGB4 309 aa8.43□□□□□ -1.06
UPF1-213ENST00000601981 OR4K15Q8NH41 348 aa8.43□□□□□ -1.06
UPF1-213ENST00000601981 CLDND2Q8NHS1 167 aa8.43□□□□□ -1.06
UPF1-213ENST00000601981 GIMAP1Q8WWP7 306 aa8.43□□□□□ -1.06
UPF1-213ENST00000601981 MED30Q96HR3 178 aa8.43□□□□□ -1.06
UPF1-213ENST00000601981 SLC25A21Q9BQT8 299 aaPredicted RBP8.43□□□□□ -1.06
UPF1-213ENST00000601981 GINS4Q9BRT9 223 aa8.43□□□□□ -1.06
UPF1-213ENST00000601981 NARFLQ9H6Q4 476 aa8.43□□□□□ -1.06
UPF1-213ENST00000601981 ETAA1Q9NY74 926 aa8.43□□□□□ -1.06
UPF1-213ENST00000601981 RCC2Q9P258 522 aaKnown RBP8.43□□□□□ -1.06
UPF1-213ENST00000601981 MIOXQ9UGB7 285 aa8.43□□□□□ -1.06
UPF1-213ENST00000601981 NIPBLQ6KC79 2804 aaeCLIP8.43□□□□□ -1.06
UPF1-213ENST00000601981 IGHV4-61A0A0C4DH41 118 aa8.42□□□□□ -1.06
UPF1-213ENST00000601981 C3orf80F5H4A9 247 aa8.42□□□□□ -1.06
UPF1-213ENST00000601981 NOS1APO75052 506 aaPredicted RBP8.42□□□□□ -1.06
UPF1-213ENST00000601981 RHBDL1O75783 438 aa8.42□□□□□ -1.06
UPF1-213ENST00000601981 NXPH2O95156 264 aa8.42□□□□□ -1.06
UPF1-213ENST00000601981 LHBP01229 141 aa8.42□□□□□ -1.06
UPF1-213ENST00000601981 FCER2P06734 321 aa8.42□□□□□ -1.06
UPF1-213ENST00000601981 PGA5P0DJD9 388 aa8.42□□□□□ -1.06
UPF1-213ENST00000601981 RPS2P15880 293 aaKnown RBP8.42□□□□□ -1.06
UPF1-213ENST00000601981 AMY2BP19961 511 aa8.42□□□□□ -1.06
UPF1-213ENST00000601981 CD80P33681 288 aa8.42□□□□□ -1.06
UPF1-213ENST00000601981 HRH1P35367 487 aa8.42□□□□□ -1.06
UPF1-213ENST00000601981 MRPS15P82914 257 aaKnown RBP8.42□□□□□ -1.06
UPF1-213ENST00000601981 CD300CQ08708 224 aa8.42□□□□□ -1.06
UPF1-213ENST00000601981 METTL11BQ5VVY1 283 aa8.42□□□□□ -1.06
UPF1-213ENST00000601981 TEX36Q5VZQ5 186 aa8.42□□□□□ -1.06
UPF1-213ENST00000601981 CD276Q5ZPR3 534 aa8.42□□□□□ -1.06
UPF1-213ENST00000601981 OR52W1Q6IF63 320 aa8.42□□□□□ -1.06
UPF1-213ENST00000601981 IDO2Q6ZQW0 420 aa8.42□□□□□ -1.06
UPF1-213ENST00000601981 SLC36A1Q7Z2H8 476 aa8.42□□□□□ -1.06
UPF1-213ENST00000601981 FAM90A1Q86YD7 464 aa8.42□□□□□ -1.06
UPF1-213ENST00000601981 ARRDC1Q8N5I2 433 aa8.42□□□□□ -1.06
UPF1-213ENST00000601981 BEST4Q8NFU0 473 aa8.42□□□□□ -1.06
UPF1-213ENST00000601981 OR8B3Q8NGG8 313 aa8.42□□□□□ -1.06
UPF1-213ENST00000601981 OR6F1Q8NGZ6 308 aa8.42□□□□□ -1.06
UPF1-213ENST00000601981 OR8B2Q96RD0 313 aa8.42□□□□□ -1.06
UPF1-213ENST00000601981 SLC6A7Q99884 636 aa8.42□□□□□ -1.06
UPF1-213ENST00000601981 CMSS1Q9BQ75 279 aaKnown RBP8.42□□□□□ -1.06
UPF1-213ENST00000601981 SULT4A1Q9BR01 284 aa8.42□□□□□ -1.06
UPF1-213ENST00000601981 TMUB1Q9BVT8 246 aa8.42□□□□□ -1.06
UPF1-213ENST00000601981 DNTTIP1Q9H147 329 aa8.42□□□□□ -1.06
UPF1-213ENST00000601981 OR51J1Q9H342 316 aa8.42□□□□□ -1.06
UPF1-213ENST00000601981 ZNF665Q9H7R5 613 aa8.42□□□□□ -1.06
UPF1-213ENST00000601981 IFT22Q9H7X7 185 aa8.42□□□□□ -1.06
UPF1-213ENST00000601981 SPACA1Q9HBV2 294 aa8.42□□□□□ -1.06
UPF1-213ENST00000601981 DCAF16Q9NXF7 216 aa8.42□□□□□ -1.06
UPF1-213ENST00000601981 AK3Q9UIJ7 227 aa8.42□□□□□ -1.06
UPF1-213ENST00000601981 ZNF221Q9UK13 617 aa8.42□□□□□ -1.06
UPF1-213ENST00000601981 FLVCR2Q9UPI3 526 aa8.42□□□□□ -1.06
UPF1-213ENST00000601981 ABCA1O95477 2261 aa8.42□□□□□ -1.06
UPF1-213ENST00000601981 WNK2Q9Y3S1 2297 aa8.41□□□□□ -1.06
UPF1-213ENST00000601981 SNRPGP15A8MWD9 76 aa8.41□□□□□ -1.06
UPF1-213ENST00000601981 F8VVB4 439 aa8.41□□□□□ -1.06
UPF1-213ENST00000601981 F8VWA3 439 aa8.41□□□□□ -1.06
UPF1-213ENST00000601981 OR7C1O76099 320 aaPredicted RBP8.41□□□□□ -1.06
UPF1-213ENST00000601981 ZNF205O95201 554 aa8.41□□□□□ -1.06
UPF1-213ENST00000601981 IGHV2-5P01817 119 aa8.41□□□□□ -1.06
UPF1-213ENST00000601981 IFNA6P05013 189 aa8.41□□□□□ -1.06
UPF1-213ENST00000601981 GLAP06280 429 aa8.41□□□□□ -1.06
UPF1-213ENST00000601981 PRKACAP17612 351 aa8.41□□□□□ -1.06
UPF1-213ENST00000601981 NPY4RP50391 375 aa8.41□□□□□ -1.06
UPF1-213ENST00000601981 SNU13P55769 128 aaKnown RBP8.41□□□□□ -1.06
UPF1-213ENST00000601981 GMFBP60983 142 aa8.41□□□□□ -1.06
UPF1-213ENST00000601981 ERVK11-1P61568 191 aa8.41□□□□□ -1.06
UPF1-213ENST00000601981 TMEM249Q2WGJ8 235 aa8.41□□□□□ -1.06
UPF1-213ENST00000601981 ESCO2Q56NI9 601 aa8.41□□□□□ -1.06
UPF1-213ENST00000601981 GLDNQ6ZMI3 551 aaPredicted RBP8.41□□□□□ -1.06
UPF1-213ENST00000601981 FAM58AQ8N1B3 248 aa8.41□□□□□ -1.06
UPF1-213ENST00000601981 ZDHHC22Q8N966 263 aa8.41□□□□□ -1.06
UPF1-213ENST00000601981 DEFB108BQ8NET1 73 aa8.41□□□□□ -1.06
UPF1-213ENST00000601981 OR13C8Q8NGS7 320 aa8.41□□□□□ -1.06
UPF1-213ENST00000601981 OR5H2Q8NGV7 314 aa8.41□□□□□ -1.06
UPF1-213ENST00000601981 NEIL1Q96FI4 390 aaPredicted RBP8.41□□□□□ -1.06
UPF1-213ENST00000601981 ST6GAL2Q96JF0 529 aa8.41□□□□□ -1.06
UPF1-213ENST00000601981 NRIP2Q9BQI9 281 aa8.41□□□□□ -1.06
UPF1-213ENST00000601981 TMEM246Q9BRR3 403 aa8.41□□□□□ -1.06
UPF1-213ENST00000601981 FAAP24Q9BTP7 215 aa8.41□□□□□ -1.06
UPF1-213ENST00000601981 ALX4Q9H161 411 aaPredicted RBP8.41□□□□□ -1.06
UPF1-213ENST00000601981 MED28Q9H204 178 aa8.41□□□□□ -1.06
UPF1-213ENST00000601981 PATZ1Q9HBE1 687 aaKnown RBP8.41□□□□□ -1.06
UPF1-213ENST00000601981 TMEM165Q9HC07 324 aa8.41□□□□□ -1.06
UPF1-213ENST00000601981 GPN1Q9HCN4 374 aaPredicted RBP8.41□□□□□ -1.06
UPF1-213ENST00000601981 C12orf4Q9NQ89 552 aa8.41□□□□□ -1.06
UPF1-213ENST00000601981 ZNF581Q9P0T4 197 aa8.41□□□□□ -1.06
UPF1-213ENST00000601981 GLS2Q9UI32 602 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms