RNA–Protein interactions for RNA: ENST00000601538.5

SHANK2-218, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SHANK2, Length 9,062 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-218ENST00000601538 SIP14410 1827 aa10.89□□□□□ -0.67
SHANK2-218ENST00000601538 HCFC1P51610 2035 aa10.89□□□□□ -0.67
SHANK2-218ENST00000601538 IER3P46695 156 aa10.89□□□□□ -0.67
SHANK2-218ENST00000601538 CLDN2P57739 230 aa10.89□□□□□ -0.67
SHANK2-218ENST00000601538 NOXO1Q8NFA2 376 aa10.89□□□□□ -0.67
SHANK2-218ENST00000601538 OR1B1Q8NGR6 318 aa10.89□□□□□ -0.67
SHANK2-218ENST00000601538 INSM2Q96T92 566 aaPredicted RBP10.89□□□□□ -0.67
SHANK2-218ENST00000601538 ATRXP46100 2492 aa10.89□□□□□ -0.67
SHANK2-218ENST00000601538 SIGLEC11Q96RL6 698 aa10.89□□□□□ -0.67
SHANK2-218ENST00000601538 ANAPC1Q9H1A4 1944 aa10.89□□□□□ -0.67
SHANK2-218ENST00000601538 CTXND1A0A1B0GTU2 59 aa10.89□□□□□ -0.67
SHANK2-218ENST00000601538 CDS2O95674 445 aa10.89□□□□□ -0.67
SHANK2-218ENST00000601538 SELENOPP49908 381 aa10.89□□□□□ -0.67
SHANK2-218ENST00000601538 RAB9AP51151 201 aa10.89□□□□□ -0.67
SHANK2-218ENST00000601538 ZNF660Q6AZW8 331 aaPredicted RBP10.89□□□□□ -0.67
SHANK2-218ENST00000601538 GMLQ99445 158 aa10.89□□□□□ -0.67
SHANK2-218ENST00000601538 TMEM208Q9BTX3 173 aa10.89□□□□□ -0.67
SHANK2-218ENST00000601538 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.89□□□□□ -0.67
SHANK2-218ENST00000601538 A8MWL6 223 aa10.89□□□□□ -0.67
SHANK2-218ENST00000601538 CSN3P07498 182 aa10.89□□□□□ -0.67
SHANK2-218ENST00000601538 CDKN2AP42771 156 aaKnown RBP10.89□□□□□ -0.67
SHANK2-218ENST00000601538 KIR3DL2P43630 455 aa10.89□□□□□ -0.67
SHANK2-218ENST00000601538 ISOC2Q96AB3 205 aa10.89□□□□□ -0.67
SHANK2-218ENST00000601538 NEU3Q9UQ49 428 aa10.89□□□□□ -0.67
SHANK2-218ENST00000601538 PPICP45877 212 aa10.89□□□□□ -0.67
SHANK2-218ENST00000601538 HOXA4Q00056 320 aaPredicted RBP10.89□□□□□ -0.67
SHANK2-218ENST00000601538 AQP10Q96PS8 301 aa10.89□□□□□ -0.67
SHANK2-218ENST00000601538 TYMSP04818 313 aa10.88□□□□□ -0.67
SHANK2-218ENST00000601538 VDAC1P21796 283 aa10.88□□□□□ -0.67
SHANK2-218ENST00000601538 SPNS3Q6ZMD2 512 aa10.88□□□□□ -0.67
SHANK2-218ENST00000601538 ZNF740Q8NDX6 193 aa10.88□□□□□ -0.67
SHANK2-218ENST00000601538 AKIRIN1Q9H9L7 192 aaPredicted RBP10.88□□□□□ -0.67
SHANK2-218ENST00000601538 MRPS18AQ9NVS2 196 aaKnown RBP10.88□□□□□ -0.67
SHANK2-218ENST00000601538 FOXJ2Q9P0K8 574 aa10.88□□□□□ -0.67
SHANK2-218ENST00000601538 DAPP1Q9UN19 280 aa10.88□□□□□ -0.67
SHANK2-218ENST00000601538 A0A1B0GU03 582 aa10.88□□□□□ -0.67
SHANK2-218ENST00000601538 CTSDP07339 412 aaPredicted RBP10.88□□□□□ -0.67
SHANK2-218ENST00000601538 HOXD9P28356 352 aaPredicted RBP10.88□□□□□ -0.67
SHANK2-218ENST00000601538 RPL34P49207 117 aaKnown RBP10.88□□□□□ -0.67
SHANK2-218ENST00000601538 OR8B3Q8NGG8 313 aa10.88□□□□□ -0.67
SHANK2-218ENST00000601538 SAMD13Q5VXD3 122 aa10.88□□□□□ -0.67
SHANK2-218ENST00000601538 TMEM190Q8WZ59 177 aa10.88□□□□□ -0.67
SHANK2-218ENST00000601538 ZNF775Q96BV0 537 aaPredicted RBP10.88□□□□□ -0.67
SHANK2-218ENST00000601538 LINC00587B1AMM8 73 aa10.88□□□□□ -0.67
SHANK2-218ENST00000601538 KISS1Q15726 138 aa10.88□□□□□ -0.67
SHANK2-218ENST00000601538 MRPL54Q6P161 138 aaKnown RBP10.88□□□□□ -0.67
SHANK2-218ENST00000601538 MS4A6EQ96DS6 147 aa10.88□□□□□ -0.67
SHANK2-218ENST00000601538 LCTP09848 1927 aa10.88□□□□□ -0.67
SHANK2-218ENST00000601538 RBFOX2O43251 390 aaKnown RBP eCLIP10.88□□□□□ -0.671e-6■■■□□ 16.9
SHANK2-218ENST00000601538 IL4P05112 153 aa10.88□□□□□ -0.67
SHANK2-218ENST00000601538 SMIM13P0DJ93 91 aa10.88□□□□□ -0.67
SHANK2-218ENST00000601538 HKR1P10072 659 aa10.88□□□□□ -0.67
SHANK2-218ENST00000601538 BCL2P10415 239 aa10.88□□□□□ -0.67
SHANK2-218ENST00000601538 CEBPBP17676 345 aa10.88□□□□□ -0.67
SHANK2-218ENST00000601538 GNB2P62879 340 aa10.88□□□□□ -0.67
SHANK2-218ENST00000601538 GAMTQ14353 236 aa10.88□□□□□ -0.67
SHANK2-218ENST00000601538 OR1F12Q8NHA8 337 aa10.88□□□□□ -0.67
SHANK2-218ENST00000601538 LRP12Q9Y561 859 aa10.88□□□□□ -0.67
SHANK2-218ENST00000601538 OR51B4Q9Y5P0 310 aa10.88□□□□□ -0.67
SHANK2-218ENST00000601538 XIRP1Q702N8 1843 aaKnown RBP10.88□□□□□ -0.67
SHANK2-218ENST00000601538 PMELP40967 661 aa10.88□□□□□ -0.67
SHANK2-218ENST00000601538 ARHGAP5-AS1Q96IT6 56 aa10.88□□□□□ -0.67
SHANK2-218ENST00000601538 IL23AQ9NPF7 189 aa10.88□□□□□ -0.67
SHANK2-218ENST00000601538 NPTNQ9Y639 398 aa10.88□□□□□ -0.67
SHANK2-218ENST00000601538 CREBBPQ92793 2442 aa10.88□□□□□ -0.67
SHANK2-218ENST00000601538 DNASE2O00115 360 aaPredicted RBP10.88□□□□□ -0.67
SHANK2-218ENST00000601538 SNAI1O95863 264 aaPredicted RBP10.88□□□□□ -0.67
SHANK2-218ENST00000601538 NIT1Q86X76 327 aa10.88□□□□□ -0.67
SHANK2-218ENST00000601538 ABHD1Q96SE0 405 aa10.88□□□□□ -0.67
SHANK2-218ENST00000601538 NCOA6Q14686 2063 aaPredicted RBP10.87□□□□□ -0.67
SHANK2-218ENST00000601538 IGKV6D-21A0A0A0MT36 114 aa10.87□□□□□ -0.67
SHANK2-218ENST00000601538 PTGESO14684 152 aa10.87□□□□□ -0.67
SHANK2-218ENST00000601538 HFEQ30201 348 aa10.87□□□□□ -0.67
SHANK2-218ENST00000601538 GHRHP01286 108 aa10.87□□□□□ -0.67
SHANK2-218ENST00000601538 HLA-DRB1P01911 266 aa10.87□□□□□ -0.67
SHANK2-218ENST00000601538 LINC00596Q86U02 117 aa10.87□□□□□ -0.67
SHANK2-218ENST00000601538 GBGT1Q8N5D6 347 aa10.87□□□□□ -0.67
SHANK2-218ENST00000601538 IL19Q9UHD0 177 aa10.87□□□□□ -0.67
SHANK2-218ENST00000601538 HS3ST3A1Q9Y663 406 aa10.87□□□□□ -0.67
SHANK2-218ENST00000601538 MBLAC1A4D2B0 266 aaPredicted RBP10.87□□□□□ -0.67
SHANK2-218ENST00000601538 FRG2CA6NGY1 282 aa10.87□□□□□ -0.67
SHANK2-218ENST00000601538 CEACAM3P40198 252 aa10.87□□□□□ -0.67
SHANK2-218ENST00000601538 SPACA5Q96QH8 159 aa10.87□□□□□ -0.67
SHANK2-218ENST00000601538 EMC6Q9BV81 110 aa10.87□□□□□ -0.67
SHANK2-218ENST00000601538 EML5Q05BV3 1969 aa10.87□□□□□ -0.67
SHANK2-218ENST00000601538 CACNA1HO95180 2353 aa10.87□□□□□ -0.67
SHANK2-218ENST00000601538 SSX8Q7RTT4 187 aa10.87□□□□□ -0.67
SHANK2-218ENST00000601538 KMT5CQ86Y97 462 aa10.87□□□□□ -0.67
SHANK2-218ENST00000601538 GLIPR1P48060 266 aa10.87□□□□□ -0.67
SHANK2-218ENST00000601538 ASB5Q8WWX0 329 aa10.87□□□□□ -0.67
SHANK2-218ENST00000601538 ZBP1Q9H171 429 aa10.87□□□□□ -0.67
SHANK2-218ENST00000601538 CES1P1Q9UKY3 287 aa10.87□□□□□ -0.67
SHANK2-218ENST00000601538 CDKN3Q16667 212 aa10.87□□□□□ -0.67
SHANK2-218ENST00000601538 MRAP2Q96G30 205 aa10.87□□□□□ -0.67
SHANK2-218ENST00000601538 RAB33BQ9H082 229 aa10.87□□□□□ -0.67
SHANK2-218ENST00000601538 B9D1Q9UPM9 204 aa10.87□□□□□ -0.67
SHANK2-218ENST00000601538 SGMS2Q8NHU3 365 aa10.87□□□□□ -0.67
SHANK2-218ENST00000601538 HSPB9Q9BQS6 159 aa10.87□□□□□ -0.67
SHANK2-218ENST00000601538 ZNF865P0CJ78 1059 aaPredicted RBP10.86□□□□□ -0.67
SHANK2-218ENST00000601538 OR5A1Q8NGJ0 315 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms