RNA–Protein interactions for RNA: ENST00000601319.1

HERC3-214, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 2

Gene HERC3, Length 1,298 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-214ENST00000601319 RCC2Q9P258 522 aaKnown RBP13.88□□□□□ -0.19
HERC3-214ENST00000601319 MEGF8Q7Z7M0 2845 aa13.87□□□□□ -0.19
HERC3-214ENST00000601319 FAM90A10PA6NDY2 464 aa13.87□□□□□ -0.19
HERC3-214ENST00000601319 FAM90A18PA6NE21 464 aa13.87□□□□□ -0.19
HERC3-214ENST00000601319 FAM90A16PA6NEW6 464 aa13.87□□□□□ -0.19
HERC3-214ENST00000601319 FAM90A20PA6NIJ5 464 aa13.87□□□□□ -0.19
HERC3-214ENST00000601319 FAM90A7PA6NKC0 464 aa13.87□□□□□ -0.19
HERC3-214ENST00000601319 FAM90A22PA8MWA6 464 aa13.87□□□□□ -0.19
HERC3-214ENST00000601319 FAM90A12PA8MX19 464 aa13.87□□□□□ -0.19
HERC3-214ENST00000601319 FAM90A5PA8MXJ8 464 aa13.87□□□□□ -0.19
HERC3-214ENST00000601319 FAM90A23PA8MXZ1 464 aa13.87□□□□□ -0.19
HERC3-214ENST00000601319 CHST1O43916 411 aa13.87□□□□□ -0.19
HERC3-214ENST00000601319 ATP6V1G2O95670 118 aa13.87□□□□□ -0.19
HERC3-214ENST00000601319 IL1AP01583 271 aa13.87□□□□□ -0.19
HERC3-214ENST00000601319 FAM90A15PP0C7V4 464 aa13.87□□□□□ -0.19
HERC3-214ENST00000601319 FAM90A13PP0C7W8 464 aa13.87□□□□□ -0.19
HERC3-214ENST00000601319 FAM90A14PP0C7W9 464 aa13.87□□□□□ -0.19
HERC3-214ENST00000601319 FAM90A24PP0C7X0 464 aa13.87□□□□□ -0.19
HERC3-214ENST00000601319 GDNFP39905 211 aa13.87□□□□□ -0.19
HERC3-214ENST00000601319 TPBGQ13641 420 aa13.87□□□□□ -0.19
HERC3-214ENST00000601319 FAM189A2Q15884 450 aa13.87□□□□□ -0.19
HERC3-214ENST00000601319 LY6EQ16553 131 aa13.87□□□□□ -0.19
HERC3-214ENST00000601319 ACSM3Q53FZ2 586 aa13.87□□□□□ -0.19
HERC3-214ENST00000601319 AWAT2Q6E213 333 aa13.87□□□□□ -0.19
HERC3-214ENST00000601319 C11orf88Q6PI97 169 aa13.87□□□□□ -0.19
HERC3-214ENST00000601319 GLIPR1L1Q6UWM5 242 aa13.87□□□□□ -0.19
HERC3-214ENST00000601319 PRSS48Q7RTY5 328 aa13.87□□□□□ -0.19
HERC3-214ENST00000601319 DTX3Q8N9I9 347 aa13.87□□□□□ -0.19
HERC3-214ENST00000601319 OR4C13Q8NGP0 309 aa13.87□□□□□ -0.19
HERC3-214ENST00000601319 NDNFQ8TB73 568 aa13.87□□□□□ -0.19
HERC3-214ENST00000601319 UFD1Q92890 307 aa13.87□□□□□ -0.19
HERC3-214ENST00000601319 CREB3L1Q96BA8 519 aa13.87□□□□□ -0.19
HERC3-214ENST00000601319 KIRREL1Q96J84 757 aa13.87□□□□□ -0.19
HERC3-214ENST00000601319 ZNF286AQ9HBT8 521 aa13.87□□□□□ -0.19
HERC3-214ENST00000601319 ABCB10Q9NRK6 738 aa13.87□□□□□ -0.19
HERC3-214ENST00000601319 CALYQ9NYX4 217 aa13.87□□□□□ -0.19
HERC3-214ENST00000601319 ZNF581Q9P0T4 197 aa13.87□□□□□ -0.19
HERC3-214ENST00000601319 GHRLQ9UBU3 117 aa13.87□□□□□ -0.19
HERC3-214ENST00000601319 FBLN5Q9UBX5 448 aa13.87□□□□□ -0.19
HERC3-214ENST00000601319 PITPNC1Q9UKF7 332 aa13.87□□□□□ -0.19
HERC3-214ENST00000601319 RAB26Q9ULW5 256 aa13.87□□□□□ -0.19
HERC3-214ENST00000601319 A0A1W2PP11 408 aa13.86□□□□□ -0.19
HERC3-214ENST00000601319 TMEM30CPA0ZSE6 113 aa13.86□□□□□ -0.19
HERC3-214ENST00000601319 NPIPB11E5RHQ5 1161 aa13.86□□□□□ -0.19
HERC3-214ENST00000601319 GP2P55259 537 aaKnown RBP13.86□□□□□ -0.19
HERC3-214ENST00000601319 MLLT11Q13015 90 aaPredicted RBP13.86□□□□□ -0.19
HERC3-214ENST00000601319 INSL4Q14641 139 aa13.86□□□□□ -0.19
HERC3-214ENST00000601319 RBM48Q5RL73 367 aaKnown RBP13.86□□□□□ -0.19
HERC3-214ENST00000601319 BAIAP2L2Q6UXY1 529 aa13.86□□□□□ -0.19
HERC3-214ENST00000601319 OR10A7Q8NGE5 316 aa13.86□□□□□ -0.19
HERC3-214ENST00000601319 TMED9Q9BVK6 235 aa13.86□□□□□ -0.19
HERC3-214ENST00000601319 NPFFR1Q9GZQ6 430 aa13.86□□□□□ -0.19
HERC3-214ENST00000601319 ING3Q9NXR8 418 aa13.86□□□□□ -0.19
HERC3-214ENST00000601319 DPM3Q9P2X0 92 aa13.86□□□□□ -0.19
HERC3-214ENST00000601319 BLOC1S6Q9UL45 172 aa13.86□□□□□ -0.19
HERC3-214ENST00000601319 A6NDX4 124 aa13.85□□□□□ -0.19
HERC3-214ENST00000601319 UCHL1P09936 223 aa13.85□□□□□ -0.19
HERC3-214ENST00000601319 UBBP0CG47 229 aa13.85□□□□□ -0.19
HERC3-214ENST00000601319 MGMTP16455 207 aa13.85□□□□□ -0.19
HERC3-214ENST00000601319 PSMA1P25786 263 aaKnown RBP13.85□□□□□ -0.19
HERC3-214ENST00000601319 GABRA5P31644 462 aa13.85□□□□□ -0.19
HERC3-214ENST00000601319 CEACAM3P40198 252 aa13.85□□□□□ -0.19
HERC3-214ENST00000601319 KIR2DS4P43632 304 aa13.85□□□□□ -0.19
HERC3-214ENST00000601319 TRAM1Q15629 374 aa13.85□□□□□ -0.19
HERC3-214ENST00000601319 TBCEQ15813 527 aaPredicted RBP13.85□□□□□ -0.19
HERC3-214ENST00000601319 HLA-DRB5Q30154 266 aa13.85□□□□□ -0.19
HERC3-214ENST00000601319 PLA1AQ53H76 456 aa13.85□□□□□ -0.19
HERC3-214ENST00000601319 FAM27D1Q5T7N8 215 aa13.85□□□□□ -0.19
HERC3-214ENST00000601319 LIPKQ5VXJ0 399 aa13.85□□□□□ -0.19
HERC3-214ENST00000601319 BRICD5Q6PL45 260 aa13.85□□□□□ -0.19
HERC3-214ENST00000601319 SLC16A12Q6ZSM3 486 aa13.85□□□□□ -0.19
HERC3-214ENST00000601319 LRRTM1Q86UE6 522 aa13.85□□□□□ -0.19
HERC3-214ENST00000601319 CNBD2Q96M20 576 aa13.85□□□□□ -0.19
HERC3-214ENST00000601319 TCF7L1Q9HCS4 588 aa13.85□□□□□ -0.19
HERC3-214ENST00000601319 HILPDAQ9Y5L2 63 aa13.85□□□□□ -0.19
HERC3-214ENST00000601319 TRRAPQ9Y4A5 3859 aa13.85□□□□□ -0.19
HERC3-214ENST00000601319 LEUTXA8MZ59 168 aa13.84□□□□□ -0.19
HERC3-214ENST00000601319 F2RL2O00254 374 aa13.84□□□□□ -0.19
HERC3-214ENST00000601319 CD37P11049 281 aa13.84□□□□□ -0.19
HERC3-214ENST00000601319 CPEP16870 476 aa13.84□□□□□ -0.19
HERC3-214ENST00000601319 VHLP40337 213 aa13.84□□□□□ -0.19
HERC3-214ENST00000601319 ARHGDIBP52566 201 aa13.84□□□□□ -0.19
HERC3-214ENST00000601319 EFNB2P52799 333 aa13.84□□□□□ -0.19
HERC3-214ENST00000601319 PRRX1P54821 245 aa13.84□□□□□ -0.19
HERC3-214ENST00000601319 HSD17B12Q53GQ0 312 aa13.84□□□□□ -0.19
HERC3-214ENST00000601319 C1orf100Q5SVJ3 147 aa13.84□□□□□ -0.19
HERC3-214ENST00000601319 ATAD3CQ5T2N8 411 aa13.84□□□□□ -0.19
HERC3-214ENST00000601319 ZNF497Q6ZNH5 498 aa13.84□□□□□ -0.19
HERC3-214ENST00000601319 TMEM104Q8NE00 496 aa13.84□□□□□ -0.19
HERC3-214ENST00000601319 OR9G1Q8NH87 305 aa13.84□□□□□ -0.19
HERC3-214ENST00000601319 MRGPRDQ8TDS7 321 aa13.84□□□□□ -0.19
HERC3-214ENST00000601319 Q96M66 194 aa13.84□□□□□ -0.19
HERC3-214ENST00000601319 CST11Q9H112 138 aa13.84□□□□□ -0.19
HERC3-214ENST00000601319 IDI2-AS1Q9NZ38 188 aa13.84□□□□□ -0.19
HERC3-214ENST00000601319 TET2Q6N021 2002 aaPredicted RBP13.83□□□□□ -0.2
HERC3-214ENST00000601319 FAM172BPA6NC97 362 aa13.83□□□□□ -0.2
HERC3-214ENST00000601319 OOSP1A8MZH6 123 aa13.83□□□□□ -0.2
HERC3-214ENST00000601319 LY6LH3BQJ8 138 aa13.83□□□□□ -0.2
HERC3-214ENST00000601319 BUB1B-PAK6H3BSN5 160 aa13.83□□□□□ -0.2
HERC3-214ENST00000601319 H3BUI4 141 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms