RNA–Protein interactions for RNA: ENST00000600840.1

TRIM28-214, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 338 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-214ENST00000600840 SLC33A1O00400 549 aaPredicted RBP7.2□□□□□ -1.26
TRIM28-214ENST00000600840 CTDSP2O14595 271 aa7.2□□□□□ -1.26
TRIM28-214ENST00000600840 GEMIN2O14893 280 aaKnown RBP7.2□□□□□ -1.26
TRIM28-214ENST00000600840 OR2H2O95918 312 aa7.2□□□□□ -1.26
TRIM28-214ENST00000600840 HAND1O96004 215 aa7.2□□□□□ -1.26
TRIM28-214ENST00000600840 CYB5AP00167 134 aa7.2□□□□□ -1.26
TRIM28-214ENST00000600840 CHRM2P08172 466 aa7.2□□□□□ -1.26
TRIM28-214ENST00000600840 FAM90A15PP0C7V4 464 aa7.2□□□□□ -1.26
TRIM28-214ENST00000600840 FAM90A13PP0C7W8 464 aa7.2□□□□□ -1.26
TRIM28-214ENST00000600840 FAM90A14PP0C7W9 464 aa7.2□□□□□ -1.26
TRIM28-214ENST00000600840 FAM90A24PP0C7X0 464 aa7.2□□□□□ -1.26
TRIM28-214ENST00000600840 IL7P13232 177 aa7.2□□□□□ -1.26
TRIM28-214ENST00000600840 GTF2F2P13984 249 aa7.2□□□□□ -1.26
TRIM28-214ENST00000600840 PRKACAP17612 351 aa7.2□□□□□ -1.26
TRIM28-214ENST00000600840 RAB6AP20340 208 aa7.2□□□□□ -1.26
TRIM28-214ENST00000600840 SERPINA2P20848 420 aa7.2□□□□□ -1.26
TRIM28-214ENST00000600840 CAPZA1P52907 286 aa7.2□□□□□ -1.26
TRIM28-214ENST00000600840 GMFBP60983 142 aa7.2□□□□□ -1.26
TRIM28-214ENST00000600840 PAX5Q02548 391 aa7.2□□□□□ -1.26
TRIM28-214ENST00000600840 COL10A1Q03692 680 aa7.2□□□□□ -1.26
TRIM28-214ENST00000600840 TAF9Q16594 264 aa7.2□□□□□ -1.26
TRIM28-214ENST00000600840 SMIM21Q3B7S5 101 aa7.2□□□□□ -1.26
TRIM28-214ENST00000600840 TRIQKQ629K1 86 aa7.2□□□□□ -1.26
TRIM28-214ENST00000600840 CCBE1Q6UXH8 406 aaPredicted RBP7.2□□□□□ -1.26
TRIM28-214ENST00000600840 GAPTQ8N292 157 aa7.2□□□□□ -1.26
TRIM28-214ENST00000600840 MUC20Q8N307 709 aaPredicted RBP7.2□□□□□ -1.26
TRIM28-214ENST00000600840 BPIFB2Q8N4F0 458 aa7.2□□□□□ -1.26
TRIM28-214ENST00000600840 SPICQ8N5J4 248 aa7.2□□□□□ -1.26
TRIM28-214ENST00000600840 FAM216BQ8N7L0 139 aa7.2□□□□□ -1.26
TRIM28-214ENST00000600840 ZNRF1Q8ND25 227 aa7.2□□□□□ -1.26
TRIM28-214ENST00000600840 LY6G5BQ8NDX9 201 aa7.2□□□□□ -1.26
TRIM28-214ENST00000600840 OR4S1Q8NGB4 309 aa7.2□□□□□ -1.26
TRIM28-214ENST00000600840 C15orf40Q8WUR7 153 aa7.2□□□□□ -1.26
TRIM28-214ENST00000600840 ABCG5Q9H222 651 aa7.2□□□□□ -1.26
TRIM28-214ENST00000600840 MIXL1Q9H2W2 232 aa7.2□□□□□ -1.26
TRIM28-214ENST00000600840 ABRACLQ9P1F3 81 aa7.2□□□□□ -1.26
TRIM28-214ENST00000600840 NUP50Q9UKX7 468 aa7.2□□□□□ -1.26
TRIM28-214ENST00000600840 RAB22AQ9UL26 194 aa7.2□□□□□ -1.26
TRIM28-214ENST00000600840 KCNK7Q9Y2U2 307 aa7.2□□□□□ -1.26
TRIM28-214ENST00000600840 DNAJC9-AS1A6NH13 148 aa7.19□□□□□ -1.26
TRIM28-214ENST00000600840 DVL1O14640 695 aa7.19□□□□□ -1.26
TRIM28-214ENST00000600840 SH2D1BO14796 132 aa7.19□□□□□ -1.26
TRIM28-214ENST00000600840 SOCS1O15524 211 aa7.19□□□□□ -1.26
TRIM28-214ENST00000600840 CRTAPO75718 401 aaPredicted RBP7.19□□□□□ -1.26
TRIM28-214ENST00000600840 MPIG6BO95866 241 aa7.19□□□□□ -1.26
TRIM28-214ENST00000600840 CSTBP04080 98 aaKnown RBP7.19□□□□□ -1.26
TRIM28-214ENST00000600840 TK1P04183 234 aa7.19□□□□□ -1.26
TRIM28-214ENST00000600840 CGB3P0DN86 165 aa7.19□□□□□ -1.26
TRIM28-214ENST00000600840 CGB7P0DN87 165 aa7.19□□□□□ -1.26
TRIM28-214ENST00000600840 CHATP28329 748 aa7.19□□□□□ -1.26
TRIM28-214ENST00000600840 OR3A1P47881 315 aa7.19□□□□□ -1.26
TRIM28-214ENST00000600840 INPP1P49441 399 aa7.19□□□□□ -1.26
TRIM28-214ENST00000600840 EIF2B2P49770 351 aaKnown RBP7.19□□□□□ -1.26
TRIM28-214ENST00000600840 RAB25P57735 213 aa7.19□□□□□ -1.26
TRIM28-214ENST00000600840 PITPNAQ00169 270 aa7.19□□□□□ -1.26
TRIM28-214ENST00000600840 MPV17LQ2QL34 196 aa7.19□□□□□ -1.26
TRIM28-214ENST00000600840 MOGAT2Q3SYC2 334 aa7.19□□□□□ -1.26
TRIM28-214ENST00000600840 ESCO2Q56NI9 601 aa7.19□□□□□ -1.26
TRIM28-214ENST00000600840 PLAC9Q5JTB6 97 aa7.19□□□□□ -1.26
TRIM28-214ENST00000600840 IDNKQ5T6J7 187 aa7.19□□□□□ -1.26
TRIM28-214ENST00000600840 WDR25Q64LD2 544 aaPredicted RBP7.19□□□□□ -1.26
TRIM28-214ENST00000600840 Q6ZPA2 131 aa7.19□□□□□ -1.26
TRIM28-214ENST00000600840 LINC00596Q86U02 117 aa7.19□□□□□ -1.26
TRIM28-214ENST00000600840 LAX1Q8IWV1 398 aa7.19□□□□□ -1.26
TRIM28-214ENST00000600840 ZNF561Q8N587 486 aa7.19□□□□□ -1.26
TRIM28-214ENST00000600840 LGALS14Q8TCE9 139 aa7.19□□□□□ -1.26
TRIM28-214ENST00000600840 FAM46BQ96A09 425 aa7.19□□□□□ -1.26
TRIM28-214ENST00000600840 NEIL1Q96FI4 390 aaPredicted RBP7.19□□□□□ -1.26
TRIM28-214ENST00000600840 MED30Q96HR3 178 aa7.19□□□□□ -1.26
TRIM28-214ENST00000600840 SNX22Q96L94 193 aa7.19□□□□□ -1.26
TRIM28-214ENST00000600840 SOSTQ9BQB4 213 aa7.19□□□□□ -1.26
TRIM28-214ENST00000600840 SSBP3Q9BWW4 388 aaPredicted RBP7.19□□□□□ -1.26
TRIM28-214ENST00000600840 SELENOIQ9C0D9 397 aa7.19□□□□□ -1.26
TRIM28-214ENST00000600840 FAM234AQ9H0X4 552 aa7.19□□□□□ -1.26
TRIM28-214ENST00000600840 CST11Q9H112 138 aa7.19□□□□□ -1.26
TRIM28-214ENST00000600840 ELL3Q9HB65 397 aaPredicted RBP7.19□□□□□ -1.26
TRIM28-214ENST00000600840 PCDHB16Q9NRJ7 776 aa7.19□□□□□ -1.26
TRIM28-214ENST00000600840 DNAJB11Q9UBS4 358 aa7.19□□□□□ -1.26
TRIM28-214ENST00000600840 MIOXQ9UGB7 285 aa7.19□□□□□ -1.26
TRIM28-214ENST00000600840 PRKDCP78527 4128 aaKnown RBP7.18□□□□□ -1.26
TRIM28-214ENST00000600840 PKD1L1Q8TDX9 2849 aa7.18□□□□□ -1.26
TRIM28-214ENST00000600840 IGHV2-70DA0A0C4DH43 119 aa7.18□□□□□ -1.26
TRIM28-214ENST00000600840 C22orf46C9J442 243 aa7.18□□□□□ -1.26
TRIM28-214ENST00000600840 DEGS1O15121 323 aa7.18□□□□□ -1.26
TRIM28-214ENST00000600840 ADAM20O43506 726 aa7.18□□□□□ -1.26
TRIM28-214ENST00000600840 CSN2P05814 226 aa7.18□□□□□ -1.26
TRIM28-214ENST00000600840 GLAP06280 429 aa7.18□□□□□ -1.26
TRIM28-214ENST00000600840 HKR1P10072 659 aa7.18□□□□□ -1.26
TRIM28-214ENST00000600840 RPS2P15880 293 aaKnown RBP7.18□□□□□ -1.26
TRIM28-214ENST00000600840 PRTN3P24158 256 aa7.18□□□□□ -1.26
TRIM28-214ENST00000600840 FPR2P25090 351 aa7.18□□□□□ -1.26
TRIM28-214ENST00000600840 SNU13P55769 128 aaKnown RBP7.18□□□□□ -1.26
TRIM28-214ENST00000600840 IL13RA1P78552 427 aa7.18□□□□□ -1.26
TRIM28-214ENST00000600840 CBX3Q13185 183 aa7.18□□□□□ -1.26
TRIM28-214ENST00000600840 SCGB2A2Q13296 93 aa7.18□□□□□ -1.26
TRIM28-214ENST00000600840 KCNJ8Q15842 424 aa7.18□□□□□ -1.26
TRIM28-214ENST00000600840 ZNF79Q15937 498 aa7.18□□□□□ -1.26
TRIM28-214ENST00000600840 NDUFA5Q16718 116 aa7.18□□□□□ -1.26
TRIM28-214ENST00000600840 PYDC2Q56P42 97 aa7.18□□□□□ -1.26
TRIM28-214ENST00000600840 BRICD5Q6PL45 260 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms