RNA–Protein interactions for RNA: ENST00000600117.1

CCDC9-205, Transcript of coiled-coil domain containing 9, humanhuman

TSL 2

Gene CCDC9, Length 580 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-205ENST00000600117 DCAF12L2Q5VW00 463 aa15.5■□□□□ 0.07
CCDC9-205ENST00000600117 TMEM200BQ69YZ2 307 aa15.5■□□□□ 0.07
CCDC9-205ENST00000600117 FAM185AQ8N0U4 392 aa15.5■□□□□ 0.07
CCDC9-205ENST00000600117 GAPTQ8N292 157 aa15.5■□□□□ 0.07
CCDC9-205ENST00000600117 OR4M2Q8NGB6 313 aa15.5■□□□□ 0.07
CCDC9-205ENST00000600117 OR10R2Q8NGX6 335 aa15.5■□□□□ 0.07
CCDC9-205ENST00000600117 ACOT12Q8WYK0 555 aa15.5■□□□□ 0.07
CCDC9-205ENST00000600117 PECRQ9BY49 303 aa15.5■□□□□ 0.07
CCDC9-205ENST00000600117 TMPRSS13Q9BYE2 586 aa15.5■□□□□ 0.07
CCDC9-205ENST00000600117 ATG5Q9H1Y0 275 aa15.5■□□□□ 0.07
CCDC9-205ENST00000600117 NCOR1P1Q9H4R4 102 aa15.5■□□□□ 0.07
CCDC9-205ENST00000600117 ING3Q9NXR8 418 aa15.5■□□□□ 0.07
CCDC9-205ENST00000600117 KIF25Q9UIL4 384 aa15.5■□□□□ 0.07
CCDC9-205ENST00000600117 A0A1W2PQ09 198 aa15.49■□□□□ 0.07
CCDC9-205ENST00000600117 ODAMA1E959 279 aa15.49■□□□□ 0.07
CCDC9-205ENST00000600117 UBE2QL1A1L167 161 aa15.49■□□□□ 0.07
CCDC9-205ENST00000600117 FUOMA2VDF0 154 aa15.49■□□□□ 0.07
CCDC9-205ENST00000600117 RBM39Q14498 530 aaKnown RBP15.49■□□□□ 0.07
CCDC9-205ENST00000600117 SLC35E4Q6ICL7 350 aa15.49■□□□□ 0.07
CCDC9-205ENST00000600117 BTNL3Q6UXE8 466 aa15.49■□□□□ 0.07
CCDC9-205ENST00000600117 ZNF497Q6ZNH5 498 aa15.49■□□□□ 0.07
CCDC9-205ENST00000600117 NEK7Q8TDX7 302 aa15.49■□□□□ 0.07
CCDC9-205ENST00000600117 DYRK2Q92630 601 aa15.49■□□□□ 0.07
CCDC9-205ENST00000600117 DGCR14Q96DF8 476 aaKnown RBP15.49■□□□□ 0.07
CCDC9-205ENST00000600117 ARHGAP5-AS1Q96IT6 56 aa15.49■□□□□ 0.07
CCDC9-205ENST00000600117 FAAP24Q9BTP7 215 aa15.49■□□□□ 0.07
CCDC9-205ENST00000600117 ABCG5Q9H222 651 aa15.49■□□□□ 0.07
CCDC9-205ENST00000600117 ETAA1Q9NY74 926 aa15.49■□□□□ 0.07
CCDC9-205ENST00000600117 OPN4Q9UHM6 478 aa15.49■□□□□ 0.07
CCDC9-205ENST00000600117 KCNS2Q9ULS6 477 aa15.49■□□□□ 0.07
CCDC9-205ENST00000600117 MEX3AA1L020 520 aaKnown RBP15.48■□□□□ 0.07
CCDC9-205ENST00000600117 A6NHS1 94 aa15.48■□□□□ 0.07
CCDC9-205ENST00000600117 J3QLI3 93 aa15.48■□□□□ 0.07
CCDC9-205ENST00000600117 AVPP01185 164 aa15.48■□□□□ 0.07
CCDC9-205ENST00000600117 SOX6P35712 828 aa15.48■□□□□ 0.07
CCDC9-205ENST00000600117 DLX6P56179 175 aa15.48■□□□□ 0.07
CCDC9-205ENST00000600117 UBE2NLQ5JXB2 153 aa15.48■□□□□ 0.07
CCDC9-205ENST00000600117 Q6ZTK2 550 aa15.48■□□□□ 0.07
CCDC9-205ENST00000600117 CMTM4Q8IZR5 234 aa15.48■□□□□ 0.07
CCDC9-205ENST00000600117 KIR3DL3Q8N743 410 aa15.48■□□□□ 0.07
CCDC9-205ENST00000600117 SAMD12Q8N8I0 201 aa15.48■□□□□ 0.07
CCDC9-205ENST00000600117 AP3S1Q92572 193 aa15.48■□□□□ 0.07
CCDC9-205ENST00000600117 CORO2AQ92828 525 aa15.48■□□□□ 0.07
CCDC9-205ENST00000600117 RAB3CQ96E17 227 aa15.48■□□□□ 0.07
CCDC9-205ENST00000600117 SLIRPQ9GZT3 109 aaKnown RBP15.48■□□□□ 0.07
CCDC9-205ENST00000600117 SIRPDQ9H106 197 aa15.48■□□□□ 0.07
CCDC9-205ENST00000600117 PLEKHJ1Q9NW61 149 aa15.48■□□□□ 0.07
CCDC9-205ENST00000600117 COMMD3Q9UBI1 195 aa15.48■□□□□ 0.07
CCDC9-205ENST00000600117 KCNK7Q9Y2U2 307 aa15.48■□□□□ 0.07
CCDC9-205ENST00000600117 LINC00312Q9Y6C7 94 aa15.48■□□□□ 0.07
CCDC9-205ENST00000600117 hADV38S2A0JD32 116 aa15.47■□□□□ 0.07
CCDC9-205ENST00000600117 TMEM30CPA0ZSE6 113 aa15.47■□□□□ 0.07
CCDC9-205ENST00000600117 MFNGO00587 321 aa15.47■□□□□ 0.07
CCDC9-205ENST00000600117 CA11O75493 328 aa15.47■□□□□ 0.07
CCDC9-205ENST00000600117 MT-ND4P03905 459 aa15.47■□□□□ 0.07
CCDC9-205ENST00000600117 MMP9P14780 707 aa15.47■□□□□ 0.07
CCDC9-205ENST00000600117 HIST1H1DP16402 221 aaKnown RBP15.47■□□□□ 0.07
CCDC9-205ENST00000600117 CCL3L1P16619 93 aa15.47■□□□□ 0.07
CCDC9-205ENST00000600117 ARF6P62330 175 aa15.47■□□□□ 0.07
CCDC9-205ENST00000600117 CR1LQ2VPA4 569 aa15.47■□□□□ 0.07
CCDC9-205ENST00000600117 FAM120AOSQ5T036 256 aa15.47■□□□□ 0.07
CCDC9-205ENST00000600117 OLFML2AQ68BL7 652 aa15.47■□□□□ 0.07
CCDC9-205ENST00000600117 FAHD2BQ6P2I3 314 aaPredicted RBP15.47■□□□□ 0.07
CCDC9-205ENST00000600117 C1orf229Q6ZS94 237 aaPredicted RBP15.47■□□□□ 0.07
CCDC9-205ENST00000600117 IL17RELQ6ZVW7 336 aa15.47■□□□□ 0.07
CCDC9-205ENST00000600117 C11orf42Q8N5U0 333 aa15.47■□□□□ 0.07
CCDC9-205ENST00000600117 Q8N7P7 452 aa15.47■□□□□ 0.07
CCDC9-205ENST00000600117 FAHD2AQ96GK7 314 aa15.47■□□□□ 0.07
CCDC9-205ENST00000600117 AK3Q9UIJ7 227 aa15.47■□□□□ 0.07
CCDC9-205ENST00000600117 KPTNQ9Y664 436 aa15.47■□□□□ 0.07
CCDC9-205ENST00000600117 KIAA2026Q5HYC2 2103 aa15.46■□□□□ 0.07
CCDC9-205ENST00000600117 MEIKINA0A087WXM9 373 aa15.46■□□□□ 0.07
CCDC9-205ENST00000600117 M0R1W7 72 aa15.46■□□□□ 0.07
CCDC9-205ENST00000600117 SCGNO76038 276 aa15.46■□□□□ 0.07
CCDC9-205ENST00000600117 EIF4EP06730 217 aaKnown RBP15.46■□□□□ 0.07
CCDC9-205ENST00000600117 CGB3P0DN86 165 aa15.46■□□□□ 0.07
CCDC9-205ENST00000600117 CGB7P0DN87 165 aa15.46■□□□□ 0.07
CCDC9-205ENST00000600117 HNF1AP20823 631 aa15.46■□□□□ 0.07
CCDC9-205ENST00000600117 MZT2AQ6P582 158 aa15.46■□□□□ 0.07
CCDC9-205ENST00000600117 OR13A1Q8NGR1 328 aa15.46■□□□□ 0.07
CCDC9-205ENST00000600117 CMTM3Q96MX0 182 aa15.46■□□□□ 0.07
CCDC9-205ENST00000600117 WDFY2Q96P53 400 aa15.46■□□□□ 0.07
CCDC9-205ENST00000600117 TBX15Q96SF7 602 aa15.46■□□□□ 0.07
CCDC9-205ENST00000600117 C7orf69Q9H7B7 122 aa15.46■□□□□ 0.07
CCDC9-205ENST00000600117 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP15.46■□□□□ 0.07
CCDC9-205ENST00000600117 ONECUT1Q9UBC0 465 aa15.46■□□□□ 0.07
CCDC9-205ENST00000600117 UBE2J1Q9Y385 318 aaPredicted RBP15.46■□□□□ 0.07
CCDC9-205ENST00000600117 A0A075B6Q4 140 aa15.45■□□□□ 0.06
CCDC9-205ENST00000600117 A0A0A6YYH2 397 aa15.45■□□□□ 0.06
CCDC9-205ENST00000600117 TRAV39A0A0B4J263 110 aa15.45■□□□□ 0.06
CCDC9-205ENST00000600117 A6NJ64 397 aa15.45■□□□□ 0.06
CCDC9-205ENST00000600117 C17orf98A8MV24 154 aa15.45■□□□□ 0.06
CCDC9-205ENST00000600117 HPGDSO60760 199 aa15.45■□□□□ 0.06
CCDC9-205ENST00000600117 ZNF728P0DKX0 622 aa15.45■□□□□ 0.06
CCDC9-205ENST00000600117 GNB3P16520 340 aa15.45■□□□□ 0.06
CCDC9-205ENST00000600117 CDK2P24941 298 aa15.45■□□□□ 0.06
CCDC9-205ENST00000600117 Q6ZPA2 131 aa15.45■□□□□ 0.06
CCDC9-205ENST00000600117 MRPL30Q8TCC3 161 aaKnown RBP15.45■□□□□ 0.06
CCDC9-205ENST00000600117 HDHD3Q9BSH5 251 aaPredicted RBP15.45■□□□□ 0.06
CCDC9-205ENST00000600117 DCUN1D5Q9BTE7 237 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms