RNA–Protein interactions for RNA: ENST00000600055.1

LIG1-219, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 602 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-219ENST00000600055 MRGPRDQ8TDS7 321 aa12.36□□□□□ -0.43
LIG1-219ENST00000600055 CHIAQ9BZP6 476 aa12.36□□□□□ -0.43
LIG1-219ENST00000600055 CST11Q9H112 138 aa12.36□□□□□ -0.43
LIG1-219ENST00000600055 TMEM133Q9H2Q1 129 aa12.36□□□□□ -0.43
LIG1-219ENST00000600055 GAL3ST2Q9H3Q3 398 aa12.36□□□□□ -0.43
LIG1-219ENST00000600055 ZMAT3Q9HA38 289 aaKnown RBP12.36□□□□□ -0.43
LIG1-219ENST00000600055 OR6C3Q9NZP0 311 aa12.36□□□□□ -0.43
LIG1-219ENST00000600055 RCC2Q9P258 522 aaKnown RBP12.36□□□□□ -0.43
LIG1-219ENST00000600055 PEX16Q9Y5Y5 336 aa12.36□□□□□ -0.43
LIG1-219ENST00000600055 DNHD1Q96M86 4753 aa12.36□□□□□ -0.43
LIG1-219ENST00000600055 IGHV2-26A0A0B4J1V2 119 aa12.35□□□□□ -0.43
LIG1-219ENST00000600055 ZNF729A6NN14 1252 aaPredicted RBP12.35□□□□□ -0.43
LIG1-219ENST00000600055 TMEM14DPA8MWL7 114 aa12.35□□□□□ -0.43
LIG1-219ENST00000600055 ODF3BA8MYP8 253 aa12.35□□□□□ -0.43
LIG1-219ENST00000600055 LGALS4P56470 323 aa12.35□□□□□ -0.43
LIG1-219ENST00000600055 PAX5Q02548 391 aa12.35□□□□□ -0.43
LIG1-219ENST00000600055 RAB11BQ15907 218 aa12.35□□□□□ -0.43
LIG1-219ENST00000600055 SYT6Q5T7P8 510 aaPredicted RBP12.35□□□□□ -0.43
LIG1-219ENST00000600055 ZNF626Q68DY1 528 aa12.35□□□□□ -0.43
LIG1-219ENST00000600055 C16orf87Q6PH81 154 aa12.35□□□□□ -0.43
LIG1-219ENST00000600055 HEPN1Q6WQI6 88 aa12.35□□□□□ -0.43
LIG1-219ENST00000600055 DYNAPQ8N1N2 210 aa12.35□□□□□ -0.43
LIG1-219ENST00000600055 SPATA3Q8NHX4 192 aa12.35□□□□□ -0.43
LIG1-219ENST00000600055 CCDC107Q8WV48 283 aa12.35□□□□□ -0.43
LIG1-219ENST00000600055 SSMEM1Q8WWF3 244 aa12.35□□□□□ -0.43
LIG1-219ENST00000600055 DYRK2Q92630 601 aa12.35□□□□□ -0.43
LIG1-219ENST00000600055 NICN1Q9BSH3 213 aa12.35□□□□□ -0.43
LIG1-219ENST00000600055 OR51E2Q9H255 320 aa12.35□□□□□ -0.43
LIG1-219ENST00000600055 NCOR1P1Q9H4R4 102 aa12.35□□□□□ -0.43
LIG1-219ENST00000600055 CALYQ9NYX4 217 aa12.35□□□□□ -0.43
LIG1-219ENST00000600055 V9GY05 133 aa12.35□□□□□ -0.43
LIG1-219ENST00000600055 DSCAML1Q8TD84 2053 aa12.34□□□□□ -0.43
LIG1-219ENST00000600055 A0A0A6YYD4 124 aa12.34□□□□□ -0.43
LIG1-219ENST00000600055 TRAV1-2A0A0B4J238 106 aa12.34□□□□□ -0.43
LIG1-219ENST00000600055 KBTBD11-OT1A0A1B0GTJ5 212 aa12.34□□□□□ -0.43
LIG1-219ENST00000600055 TMEM30CPA0ZSE6 113 aa12.34□□□□□ -0.43
LIG1-219ENST00000600055 UBE2QL1A1L167 161 aa12.34□□□□□ -0.43
LIG1-219ENST00000600055 SMIM30A4D0T7 59 aa12.34□□□□□ -0.43
LIG1-219ENST00000600055 FAM90A10PA6NDY2 464 aa12.34□□□□□ -0.43
LIG1-219ENST00000600055 FAM90A18PA6NE21 464 aa12.34□□□□□ -0.43
LIG1-219ENST00000600055 FAM90A16PA6NEW6 464 aa12.34□□□□□ -0.43
LIG1-219ENST00000600055 FAM90A20PA6NIJ5 464 aa12.34□□□□□ -0.43
LIG1-219ENST00000600055 FAM90A8PA6NJQ4 464 aa12.34□□□□□ -0.43
LIG1-219ENST00000600055 FAM90A7PA6NKC0 464 aa12.34□□□□□ -0.43
LIG1-219ENST00000600055 FAM90A22PA8MWA6 464 aa12.34□□□□□ -0.43
LIG1-219ENST00000600055 FAM90A12PA8MX19 464 aa12.34□□□□□ -0.43
LIG1-219ENST00000600055 FAM90A5PA8MXJ8 464 aa12.34□□□□□ -0.43
LIG1-219ENST00000600055 FAM90A23PA8MXZ1 464 aa12.34□□□□□ -0.43
LIG1-219ENST00000600055 MCRIP1C9JLW8 97 aa12.34□□□□□ -0.43
LIG1-219ENST00000600055 BPNT1O95861 308 aa12.34□□□□□ -0.43
LIG1-219ENST00000600055 FAM90A15PP0C7V4 464 aa12.34□□□□□ -0.43
LIG1-219ENST00000600055 FAM90A13PP0C7W8 464 aa12.34□□□□□ -0.43
LIG1-219ENST00000600055 FAM90A14PP0C7W9 464 aa12.34□□□□□ -0.43
LIG1-219ENST00000600055 FAM90A24PP0C7X0 464 aa12.34□□□□□ -0.43
LIG1-219ENST00000600055 FUT3P21217 361 aa12.34□□□□□ -0.43
LIG1-219ENST00000600055 GALP22466 123 aa12.34□□□□□ -0.43
LIG1-219ENST00000600055 MYL9P24844 172 aa12.34□□□□□ -0.43
LIG1-219ENST00000600055 SSTR5P35346 364 aa12.34□□□□□ -0.43
LIG1-219ENST00000600055 RPS27AP62979 156 aaKnown RBP12.34□□□□□ -0.43
LIG1-219ENST00000600055 HES5Q5TA89 166 aa12.34□□□□□ -0.43
LIG1-219ENST00000600055 ZNF497Q6ZNH5 498 aa12.34□□□□□ -0.43
LIG1-219ENST00000600055 RTN4RL2Q86UN3 420 aa12.34□□□□□ -0.43
LIG1-219ENST00000600055 ABHD12Q8N2K0 398 aa12.34□□□□□ -0.43
LIG1-219ENST00000600055 TMEM86BQ8N661 226 aa12.34□□□□□ -0.43
LIG1-219ENST00000600055 ZNF565Q8N9K5 539 aa12.34□□□□□ -0.43
LIG1-219ENST00000600055 BEND2Q8NDZ0 799 aa12.34□□□□□ -0.43
LIG1-219ENST00000600055 OR51D1Q8NGF3 324 aa12.34□□□□□ -0.43
LIG1-219ENST00000600055 RFESDQ8TAC1 157 aa12.34□□□□□ -0.43
LIG1-219ENST00000600055 KCNG3Q8TAE7 436 aa12.34□□□□□ -0.43
LIG1-219ENST00000600055 GCDHQ92947 438 aaPredicted RBP12.34□□□□□ -0.43
LIG1-219ENST00000600055 CLEC7AQ9BXN2 247 aa12.34□□□□□ -0.43
LIG1-219ENST00000600055 TMEM59Q9BXS4 323 aa12.34□□□□□ -0.43
LIG1-219ENST00000600055 SPACA1Q9HBV2 294 aa12.34□□□□□ -0.43
LIG1-219ENST00000600055 TXNL4BQ9NX01 149 aaKnown RBP12.34□□□□□ -0.43
LIG1-219ENST00000600055 ETAA1Q9NY74 926 aa12.34□□□□□ -0.43
LIG1-219ENST00000600055 STUB1Q9UNE7 303 aa12.34□□□□□ -0.43
LIG1-219ENST00000600055 POMT1Q9Y6A1 747 aa12.34□□□□□ -0.43
LIG1-219ENST00000600055 TMEM89A2RUT3 159 aa12.33□□□□□ -0.44
LIG1-219ENST00000600055 FAM181BA6NEQ2 426 aa12.33□□□□□ -0.44
LIG1-219ENST00000600055 PDCD6O75340 191 aa12.33□□□□□ -0.44
LIG1-219ENST00000600055 MT-ND4P03905 459 aa12.33□□□□□ -0.44
LIG1-219ENST00000600055 ARSBP15848 533 aa12.33□□□□□ -0.44
LIG1-219ENST00000600055 NFYBP25208 207 aa12.33□□□□□ -0.44
LIG1-219ENST00000600055 PLA2G7Q13093 441 aa12.33□□□□□ -0.44
LIG1-219ENST00000600055 LTC4SQ16873 150 aa12.33□□□□□ -0.44
LIG1-219ENST00000600055 C2orf76Q3KRA6 126 aa12.33□□□□□ -0.44
LIG1-219ENST00000600055 PLA1AQ53H76 456 aa12.33□□□□□ -0.44
LIG1-219ENST00000600055 NKAPLQ5M9Q1 402 aa12.33□□□□□ -0.44
LIG1-219ENST00000600055 NR2C2APQ86WQ0 139 aa12.33□□□□□ -0.44
LIG1-219ENST00000600055 UBALD1Q8TB05 177 aa12.33□□□□□ -0.44
LIG1-219ENST00000600055 KIRREL1Q96J84 757 aa12.33□□□□□ -0.44
LIG1-219ENST00000600055 TM2D1Q9BX74 207 aa12.33□□□□□ -0.44
LIG1-219ENST00000600055 MEGF9Q9H1U4 602 aa12.33□□□□□ -0.44
LIG1-219ENST00000600055 DPAGT1Q9H3H5 408 aa12.33□□□□□ -0.44
LIG1-219ENST00000600055 ZNF286AQ9HBT8 521 aa12.33□□□□□ -0.44
LIG1-219ENST00000600055 IDI2-AS1Q9NZ38 188 aa12.33□□□□□ -0.44
LIG1-219ENST00000600055 COL6A5A8TX70 2615 aa12.32□□□□□ -0.44
LIG1-219ENST00000600055 A0A0B4J203 849 aa12.32□□□□□ -0.44
LIG1-219ENST00000600055 H3BUX3 64 aa12.32□□□□□ -0.44
LIG1-219ENST00000600055 AIPO00170 330 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms