RNA–Protein interactions for RNA: ENST00000599543.3

PNKP-213, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 986 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-213ENST00000599543 ALDOBP05062 364 aa15.06■□□□□ 0
PNKP-213ENST00000599543 CD28P10747 220 aa15.06■□□□□ 0
PNKP-213ENST00000599543 JUNBP17275 347 aaPredicted RBP15.06■□□□□ 0
PNKP-213ENST00000599543 PSMB9P28065 219 aa15.06■□□□□ 0
PNKP-213ENST00000599543 SCN1BQ07699 218 aa15.06■□□□□ 0
PNKP-213ENST00000599543 BEAN1Q3B7T3 259 aa15.06■□□□□ 0
PNKP-213ENST00000599543 SVOPQ8N4V2 548 aa15.06■□□□□ 0
PNKP-213ENST00000599543 JAGN1Q8N5M9 183 aa15.06■□□□□ 0
PNKP-213ENST00000599543 MS4A15Q8N5U1 240 aa15.06■□□□□ 0
PNKP-213ENST00000599543 MUL1Q969V5 352 aa15.06■□□□□ 0
PNKP-213ENST00000599543 YTHDF1Q9BYJ9 559 aaKnown RBP15.06■□□□□ 0
PNKP-213ENST00000599543 LRRC42Q9Y546 428 aa15.06■□□□□ 0
PNKP-213ENST00000599543 TRGV10A0A0A0MS01 117 aa15.05■□□□□ -0
PNKP-213ENST00000599543 A0A1W2PP11 408 aa15.05■□□□□ -0
PNKP-213ENST00000599543 FUOMA2VDF0 154 aa15.05■□□□□ -0
PNKP-213ENST00000599543 GPX5O75715 221 aa15.05■□□□□ -0
PNKP-213ENST00000599543 HTR3BO95264 441 aa15.05■□□□□ -0
PNKP-213ENST00000599543 OR2H2O95918 312 aa15.05■□□□□ -0
PNKP-213ENST00000599543 HTR1DP28221 377 aa15.05■□□□□ -0
PNKP-213ENST00000599543 PTGFRP43088 359 aa15.05■□□□□ -0
PNKP-213ENST00000599543 VDAC2P45880 294 aaPredicted RBP15.05■□□□□ -0
PNKP-213ENST00000599543 FABP5Q01469 135 aa15.05■□□□□ -0
PNKP-213ENST00000599543 SAMD5Q5TGI4 173 aa15.05■□□□□ -0
PNKP-213ENST00000599543 OR52W1Q6IF63 320 aa15.05■□□□□ -0
PNKP-213ENST00000599543 ZNF773Q6PK81 442 aa15.05■□□□□ -0
PNKP-213ENST00000599543 NDUFA11Q86Y39 141 aa15.05■□□□□ -0
PNKP-213ENST00000599543 OR4F17Q8NGA8 305 aa15.05■□□□□ -0
PNKP-213ENST00000599543 OR4F4Q96R69 305 aa15.05■□□□□ -0
PNKP-213ENST00000599543 ZNF581Q9P0T4 197 aa15.05■□□□□ -0
PNKP-213ENST00000599543 MMP23AO75900 390 aa15.04■□□□□ -0
PNKP-213ENST00000599543 MAPK3P27361 379 aaPredicted RBP15.04■□□□□ -0
PNKP-213ENST00000599543 ARHGDIBP52566 201 aa15.04■□□□□ -0
PNKP-213ENST00000599543 GPR50Q13585 617 aa15.04■□□□□ -0
PNKP-213ENST00000599543 RSU1Q15404 277 aa15.04■□□□□ -0
PNKP-213ENST00000599543 PIGYQ3MUY2 71 aa15.04■□□□□ -0
PNKP-213ENST00000599543 HSD17B12Q53GQ0 312 aa15.04■□□□□ -0
PNKP-213ENST00000599543 PRAMEF5Q5TYX0 476 aa15.04■□□□□ -0
PNKP-213ENST00000599543 LRRTM1Q86UE6 522 aa15.04■□□□□ -0
PNKP-213ENST00000599543 SAXO1Q8IYX7 474 aa15.04■□□□□ -0
PNKP-213ENST00000599543 ABHD12Q8N2K0 398 aa15.04■□□□□ -0
PNKP-213ENST00000599543 OR4P4Q8NGL7 312 aa15.04■□□□□ -0
PNKP-213ENST00000599543 RHOFQ9HBH0 211 aa15.04■□□□□ -0
PNKP-213ENST00000599543 ING3Q9NXR8 418 aa15.04■□□□□ -0
PNKP-213ENST00000599543 SC5DO75845 299 aa15.03■□□□□ -0
PNKP-213ENST00000599543 ZNF44P15621 663 aa15.03■□□□□ -0
PNKP-213ENST00000599543 SERPINA2P20848 420 aa15.03■□□□□ -0
PNKP-213ENST00000599543 CDK2P24941 298 aa15.03■□□□□ -0
PNKP-213ENST00000599543 BLCAPP62952 87 aa15.03■□□□□ -0
PNKP-213ENST00000599543 AESQ08117 197 aa15.03■□□□□ -0
PNKP-213ENST00000599543 NEDD8Q15843 81 aa15.03■□□□□ -0
PNKP-213ENST00000599543 KCTD21Q4G0X4 260 aa15.03■□□□□ -0
PNKP-213ENST00000599543 KPRPQ5T749 579 aaPredicted RBP15.03■□□□□ -0
PNKP-213ENST00000599543 UBE2UQ5VVX9 321 aa15.03■□□□□ -0
PNKP-213ENST00000599543 HEPN1Q6WQI6 88 aa15.03■□□□□ -0
PNKP-213ENST00000599543 RTN4RL2Q86UN3 420 aa15.03■□□□□ -0
PNKP-213ENST00000599543 OR4D6Q8NGJ1 314 aa15.03■□□□□ -0
PNKP-213ENST00000599543 ZNF596Q8TC21 504 aa15.03■□□□□ -0
PNKP-213ENST00000599543 R3HDM4Q96D70 268 aa15.03■□□□□ -0
PNKP-213ENST00000599543 CPNE2Q96FN4 548 aaPredicted RBP15.03■□□□□ -0
PNKP-213ENST00000599543 AKR1E2Q96JD6 320 aa15.03■□□□□ -0
PNKP-213ENST00000599543 CITED2Q99967 270 aaPredicted RBP15.03■□□□□ -0
PNKP-213ENST00000599543 WNT10AQ9GZT5 417 aa15.03■□□□□ -0
PNKP-213ENST00000599543 MMP28Q9H239 520 aa15.03■□□□□ -0
PNKP-213ENST00000599543 MRPS28Q9Y2Q9 187 aaKnown RBP15.03■□□□□ -0
PNKP-213ENST00000599543 FAM90A22PA8MWA6 464 aa15.02■□□□□ -0
PNKP-213ENST00000599543 HSPB6O14558 160 aa15.02■□□□□ -0
PNKP-213ENST00000599543 MRPS14O60783 128 aaKnown RBP15.02■□□□□ -0
PNKP-213ENST00000599543 UCHL1P09936 223 aa15.02■□□□□ -0
PNKP-213ENST00000599543 BRS3P32247 399 aa15.02■□□□□ -0
PNKP-213ENST00000599543 TMEM95Q3KNT9 176 aa15.02■□□□□ -0
PNKP-213ENST00000599543 SLC22A6Q4U2R8 563 aa15.02■□□□□ -0
PNKP-213ENST00000599543 Q6ZS46 218 aa15.02■□□□□ -0
PNKP-213ENST00000599543 C16orf82Q7Z2V1 217 aa15.02■□□□□ -0
PNKP-213ENST00000599543 CHST4Q8NCG5 386 aa15.02■□□□□ -0
PNKP-213ENST00000599543 PXT1Q8NFP0 134 aa15.02■□□□□ -0
PNKP-213ENST00000599543 WIPF2Q8TF74 440 aaPredicted RBP15.02■□□□□ -0
PNKP-213ENST00000599543 CAPSLQ8WWF8 208 aa15.02■□□□□ -0
PNKP-213ENST00000599543 KCNK15Q9H427 330 aa15.02■□□□□ -0
PNKP-213ENST00000599543 TAS2R3Q9NYW6 316 aa15.02■□□□□ -0
PNKP-213ENST00000599543 DPM3Q9P2X0 92 aa15.02■□□□□ -0
PNKP-213ENST00000599543 FAM172BPA6NC97 362 aa15.01□□□□□ -0.01
PNKP-213ENST00000599543 CSN2P05814 226 aa15.01□□□□□ -0.01
PNKP-213ENST00000599543 LMO1P25800 156 aa15.01□□□□□ -0.01
PNKP-213ENST00000599543 GLIPR1P48060 266 aa15.01□□□□□ -0.01
PNKP-213ENST00000599543 KRBOX4Q5JUW0 171 aa15.01□□□□□ -0.01
PNKP-213ENST00000599543 AWAT2Q6E213 333 aa15.01□□□□□ -0.01
PNKP-213ENST00000599543 Q6P435 159 aa15.01□□□□□ -0.01
PNKP-213ENST00000599543 GLIPR1L1Q6UWM5 242 aa15.01□□□□□ -0.01
PNKP-213ENST00000599543 BAIAP2L2Q6UXY1 529 aa15.01□□□□□ -0.01
PNKP-213ENST00000599543 ASCL4Q6XD76 172 aa15.01□□□□□ -0.01
PNKP-213ENST00000599543 CORO2AQ92828 525 aa15.01□□□□□ -0.01
PNKP-213ENST00000599543 CYYR1Q96J86 154 aa15.01□□□□□ -0.01
PNKP-213ENST00000599543 METTL9Q9H1A3 318 aa15.01□□□□□ -0.01
PNKP-213ENST00000599543 ODAMA1E959 279 aa15□□□□□ -0.01
PNKP-213ENST00000599543 LEUTXA8MZ59 168 aa15□□□□□ -0.01
PNKP-213ENST00000599543 PRB2P02812 416 aaPredicted RBP15□□□□□ -0.01
PNKP-213ENST00000599543 SRMP19623 302 aa15□□□□□ -0.01
PNKP-213ENST00000599543 CALRP27797 417 aaKnown RBP15□□□□□ -0.01
PNKP-213ENST00000599543 MTNR1BP49286 362 aa15□□□□□ -0.01
PNKP-213ENST00000599543 ATXN7L3Q14CW9 347 aaPredicted RBP15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms