RNA–Protein interactions for RNA: ENST00000599454.5

PNKP-212, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 529 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-212ENST00000599454 CNIH3Q8TBE1 160 aa16.68■□□□□ 0.26
PNKP-212ENST00000599454 LEAP2Q969E1 77 aa16.68■□□□□ 0.26
PNKP-212ENST00000599454 RNFT2Q96EX2 444 aa16.68■□□□□ 0.26
PNKP-212ENST00000599454 PELI1Q96FA3 418 aa16.68■□□□□ 0.26
PNKP-212ENST00000599454 RYR3Q15413 4870 aa16.68■□□□□ 0.26
PNKP-212ENST00000599454 TRAV24A0A0B4J272 114 aa16.67■□□□□ 0.26
PNKP-212ENST00000599454 CCL24O00175 119 aa16.67■□□□□ 0.26
PNKP-212ENST00000599454 AP4M1O00189 453 aa16.67■□□□□ 0.26
PNKP-212ENST00000599454 HSPB6O14558 160 aa16.67■□□□□ 0.26
PNKP-212ENST00000599454 ZNF816Q0VGE8 651 aaPredicted RBP16.67■□□□□ 0.26
PNKP-212ENST00000599454 EBI3Q14213 229 aa16.67■□□□□ 0.26
PNKP-212ENST00000599454 HNF4GQ14541 408 aa16.67■□□□□ 0.26
PNKP-212ENST00000599454 RSBN1Q5VWQ0 802 aaPredicted RBP16.67■□□□□ 0.26
PNKP-212ENST00000599454 MEDAGQ5VYS4 303 aa16.67■□□□□ 0.26
PNKP-212ENST00000599454 PARP16Q8N5Y8 322 aa16.67■□□□□ 0.26
PNKP-212ENST00000599454 TFAP2CQ92754 450 aa16.67■□□□□ 0.26
PNKP-212ENST00000599454 CENPNQ96H22 339 aaPredicted RBP16.67■□□□□ 0.26
PNKP-212ENST00000599454 LINC00527Q9UJ94 153 aa16.67■□□□□ 0.26
PNKP-212ENST00000599454 U3KQK5 164 aa16.67■□□□□ 0.26
PNKP-212ENST00000599454 SNTNA6NMZ2 147 aa16.66■□□□□ 0.26
PNKP-212ENST00000599454 J3QLW9 94 aa16.66■□□□□ 0.26
PNKP-212ENST00000599454 IGHV3-7P01780 117 aa16.66■□□□□ 0.26
PNKP-212ENST00000599454 ZNF19P17023 458 aa16.66■□□□□ 0.26
PNKP-212ENST00000599454 DIAPH2-AS1Q14236 149 aa16.66■□□□□ 0.26
PNKP-212ENST00000599454 TGIF2LXQ8IUE1 241 aa16.66■□□□□ 0.26
PNKP-212ENST00000599454 OR8U1Q8NH10 309 aa16.66■□□□□ 0.26
PNKP-212ENST00000599454 MRGPRDQ8TDS7 321 aa16.66■□□□□ 0.26
PNKP-212ENST00000599454 RAX2Q96IS3 184 aa16.66■□□□□ 0.26
PNKP-212ENST00000599454 C4orf36Q96KX1 117 aa16.66■□□□□ 0.26
PNKP-212ENST00000599454 NR1H4Q96RI1 486 aaPredicted RBP16.66■□□□□ 0.26
PNKP-212ENST00000599454 OAZ3Q9UMX2 235 aa16.66■□□□□ 0.26
PNKP-212ENST00000599454 HSD17B6O14756 317 aa16.65■□□□□ 0.26
PNKP-212ENST00000599454 ZFPL1O95159 310 aa16.65■□□□□ 0.26
PNKP-212ENST00000599454 GAPDHP04406 335 aaKnown RBP16.65■□□□□ 0.26
PNKP-212ENST00000599454 GNG10P50151 68 aa16.65■□□□□ 0.26
PNKP-212ENST00000599454 SNRPGP62308 76 aaKnown RBP16.65■□□□□ 0.26
PNKP-212ENST00000599454 LTC4SQ16873 150 aa16.65■□□□□ 0.26
PNKP-212ENST00000599454 PNLIPRP3Q17RR3 467 aa16.65■□□□□ 0.26
PNKP-212ENST00000599454 IZUMO1Q8IYV9 350 aa16.65■□□□□ 0.26
PNKP-212ENST00000599454 LIN7CQ9NUP9 197 aaKnown RBP16.65■□□□□ 0.26
PNKP-212ENST00000599454 EXOGQ9Y2C4 368 aaKnown RBP16.65■□□□□ 0.26
PNKP-212ENST00000599454 STAB2Q8WWQ8 2551 aa16.65■□□□□ 0.26
PNKP-212ENST00000599454 TMEM212A6NML5 194 aa16.64■□□□□ 0.25
PNKP-212ENST00000599454 MPZL2O60487 215 aa16.64■□□□□ 0.25
PNKP-212ENST00000599454 SSTR5P35346 364 aa16.64■□□□□ 0.25
PNKP-212ENST00000599454 GPR12P47775 334 aa16.64■□□□□ 0.25
PNKP-212ENST00000599454 RAB25P57735 213 aa16.64■□□□□ 0.25
PNKP-212ENST00000599454 MRPL28Q13084 256 aaKnown RBP16.64■□□□□ 0.25
PNKP-212ENST00000599454 KIR2DS1Q14954 304 aa16.64■□□□□ 0.25
PNKP-212ENST00000599454 CXorf66Q5JRM2 361 aaPredicted RBP16.64■□□□□ 0.25
PNKP-212ENST00000599454 C9orf66Q5T8R8 295 aa16.64■□□□□ 0.25
PNKP-212ENST00000599454 SYS1Q8N2H4 156 aa16.64■□□□□ 0.25
PNKP-212ENST00000599454 Q8NFD4 153 aa16.64■□□□□ 0.25
PNKP-212ENST00000599454 OR5M8Q8NGP6 311 aa16.64■□□□□ 0.25
PNKP-212ENST00000599454 OR2T10Q8NGZ9 312 aa16.64■□□□□ 0.25
PNKP-212ENST00000599454 RFESDQ8TAC1 157 aa16.64■□□□□ 0.25
PNKP-212ENST00000599454 EAF1Q96JC9 268 aaPredicted RBP16.64■□□□□ 0.25
PNKP-212ENST00000599454 ABCG5Q9H222 651 aa16.64■□□□□ 0.25
PNKP-212ENST00000599454 DCLRE1BQ9H816 532 aa16.64■□□□□ 0.25
PNKP-212ENST00000599454 FAM118AQ9NWS6 357 aa16.64■□□□□ 0.25
PNKP-212ENST00000599454 LSM4Q9Y4Z0 139 aaKnown RBP16.64■□□□□ 0.25
PNKP-212ENST00000599454 IGHV1-3A0A0C4DH29 117 aa16.63■□□□□ 0.25
PNKP-212ENST00000599454 NCBP2LA6PVI3 153 aaKnown RBP16.63■□□□□ 0.25
PNKP-212ENST00000599454 CCRL2O00421 344 aa16.63■□□□□ 0.25
PNKP-212ENST00000599454 MAGEB3O15480 346 aa16.63■□□□□ 0.25
PNKP-212ENST00000599454 GZMHP20718 246 aa16.63■□□□□ 0.25
PNKP-212ENST00000599454 CDX1P47902 265 aaPredicted RBP16.63■□□□□ 0.25
PNKP-212ENST00000599454 FOXE3Q13461 319 aa16.63■□□□□ 0.25
PNKP-212ENST00000599454 ZSCAN26Q16670 478 aa16.63■□□□□ 0.25
PNKP-212ENST00000599454 MOB3BQ86TA1 216 aa16.63■□□□□ 0.25
PNKP-212ENST00000599454 RNF152Q8N8N0 203 aa16.63■□□□□ 0.25
PNKP-212ENST00000599454 PLPPR1Q8TBJ4 325 aa16.63■□□□□ 0.25
PNKP-212ENST00000599454 DUX3Q96PT4 197 aa16.63■□□□□ 0.25
PNKP-212ENST00000599454 ALG8Q9BVK2 526 aa16.63■□□□□ 0.25
PNKP-212ENST00000599454 DHDHQ9UQ10 334 aa16.63■□□□□ 0.25
PNKP-212ENST00000599454 SIRT4Q9Y6E7 314 aaPredicted RBP16.63■□□□□ 0.25
PNKP-212ENST00000599454 RPLP1P05386 114 aaKnown RBP16.62■□□□□ 0.25
PNKP-212ENST00000599454 ELANEP08246 267 aa16.62■□□□□ 0.25
PNKP-212ENST00000599454 RAB3AP20336 220 aa16.62■□□□□ 0.25
PNKP-212ENST00000599454 GPR50Q13585 617 aa16.62■□□□□ 0.25
PNKP-212ENST00000599454 GALEQ14376 348 aa16.62■□□□□ 0.25
PNKP-212ENST00000599454 RSU1Q15404 277 aa16.62■□□□□ 0.25
PNKP-212ENST00000599454 C1orf146Q5VVC0 180 aa16.62■□□□□ 0.25
PNKP-212ENST00000599454 LINC00311Q8N616 119 aa16.62■□□□□ 0.25
PNKP-212ENST00000599454 Q8N6K4 173 aa16.62■□□□□ 0.25
PNKP-212ENST00000599454 C8orf31Q8N9H6 132 aa16.62■□□□□ 0.25
PNKP-212ENST00000599454 OR52M1Q8NGK5 317 aa16.62■□□□□ 0.25
PNKP-212ENST00000599454 OR5AK2Q8NH90 309 aa16.62■□□□□ 0.25
PNKP-212ENST00000599454 TNFAIP8L1Q8WVP5 186 aa16.62■□□□□ 0.25
PNKP-212ENST00000599454 GPER1Q99527 375 aa16.62■□□□□ 0.25
PNKP-212ENST00000599454 DPCDQ9BVM2 203 aaPredicted RBP16.62■□□□□ 0.25
PNKP-212ENST00000599454 IFT22Q9H7X7 185 aa16.62■□□□□ 0.25
PNKP-212ENST00000599454 ORC6Q9Y5N6 252 aa16.62■□□□□ 0.25
PNKP-212ENST00000599454 LINC01548A6NM66 108 aa16.61■□□□□ 0.25
PNKP-212ENST00000599454 GABRPO00591 440 aa16.61■□□□□ 0.25
PNKP-212ENST00000599454 RRP9O43818 475 aaKnown RBP16.61■□□□□ 0.25
PNKP-212ENST00000599454 IL3RAP26951 378 aa16.61■□□□□ 0.25
PNKP-212ENST00000599454 RASSF2P50749 326 aa16.61■□□□□ 0.25
PNKP-212ENST00000599454 LUMP51884 338 aaPredicted RBP16.61■□□□□ 0.25
PNKP-212ENST00000599454 PIGYQ3MUY2 71 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms