RNA–Protein interactions for RNA: ENST00000598938.1

LIG1-216, Transcript of DNA ligase 1, humanhuman

TSL 3

Gene LIG1, Length 377 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-216ENST00000598938 ZNF497Q6ZNH5 498 aa14.9□□□□□ -0.02
LIG1-216ENST00000598938 CLVS1Q8IUQ0 354 aaPredicted RBP14.9□□□□□ -0.02
LIG1-216ENST00000598938 NEK7Q8TDX7 302 aa14.9□□□□□ -0.02
LIG1-216ENST00000598938 SLC25A46Q96AG3 418 aa14.9□□□□□ -0.02
LIG1-216ENST00000598938 CYYR1Q96J86 154 aa14.9□□□□□ -0.02
LIG1-216ENST00000598938 ZNF714Q96N38 554 aa14.9□□□□□ -0.02
LIG1-216ENST00000598938 NEDD4LQ96PU5 975 aa14.9□□□□□ -0.02
LIG1-216ENST00000598938 METTL8Q9H825 291 aaKnown RBP14.9□□□□□ -0.02
LIG1-216ENST00000598938 ING3Q9NXR8 418 aa14.9□□□□□ -0.02
LIG1-216ENST00000598938 TRGV10A0A0A0MS01 117 aa14.89□□□□□ -0.03
LIG1-216ENST00000598938 TMEM30CPA0ZSE6 113 aa14.89□□□□□ -0.03
LIG1-216ENST00000598938 TCF21O43680 179 aa14.89□□□□□ -0.03
LIG1-216ENST00000598938 PAHP00439 452 aa14.89□□□□□ -0.03
LIG1-216ENST00000598938 RBP4P02753 201 aa14.89□□□□□ -0.03
LIG1-216ENST00000598938 PRTN3P24158 256 aa14.89□□□□□ -0.03
LIG1-216ENST00000598938 BLVRBP30043 206 aaPredicted RBP14.89□□□□□ -0.03
LIG1-216ENST00000598938 VEGFCP49767 419 aa14.89□□□□□ -0.03
LIG1-216ENST00000598938 SRSF2Q01130 221 aaKnown RBP14.89□□□□□ -0.03
LIG1-216ENST00000598938 NKAPLQ5M9Q1 402 aa14.89□□□□□ -0.03
LIG1-216ENST00000598938 IDNKQ5T6J7 187 aa14.89□□□□□ -0.03
LIG1-216ENST00000598938 GAPTQ8N292 157 aa14.89□□□□□ -0.03
LIG1-216ENST00000598938 OR56B1Q8NGI3 324 aa14.89□□□□□ -0.03
LIG1-216ENST00000598938 LGALS14Q8TCE9 139 aa14.89□□□□□ -0.03
LIG1-216ENST00000598938 TNFRSF14Q92956 283 aa14.89□□□□□ -0.03
LIG1-216ENST00000598938 BCL7BQ9BQE9 202 aa14.89□□□□□ -0.03
LIG1-216ENST00000598938 ETAA1Q9NY74 926 aa14.89□□□□□ -0.03
LIG1-216ENST00000598938 TAS2R3Q9NYW6 316 aa14.89□□□□□ -0.03
LIG1-216ENST00000598938 OR6C3Q9NZP0 311 aa14.89□□□□□ -0.03
LIG1-216ENST00000598938 DSCAML1Q8TD84 2053 aa14.89□□□□□ -0.03
LIG1-216ENST00000598938 MEIKINA0A087WXM9 373 aa14.88□□□□□ -0.03
LIG1-216ENST00000598938 TRAV40A0A0B4J280 105 aa14.88□□□□□ -0.03
LIG1-216ENST00000598938 WIPF1O43516 503 aa14.88□□□□□ -0.03
LIG1-216ENST00000598938 CA11O75493 328 aa14.88□□□□□ -0.03
LIG1-216ENST00000598938 IGHV4-38-2P0DP08 117 aa14.88□□□□□ -0.03
LIG1-216ENST00000598938 TMBIM6P55061 237 aa14.88□□□□□ -0.03
LIG1-216ENST00000598938 TMEM50BP56557 158 aa14.88□□□□□ -0.03
LIG1-216ENST00000598938 FAM189A2Q15884 450 aa14.88□□□□□ -0.03
LIG1-216ENST00000598938 USP43Q70EL4 1123 aa14.88□□□□□ -0.03
LIG1-216ENST00000598938 C6orf201Q7Z4U5 140 aa14.88□□□□□ -0.03
LIG1-216ENST00000598938 TRAPPC6BQ86SZ2 158 aa14.88□□□□□ -0.03
LIG1-216ENST00000598938 RTN4RL2Q86UN3 420 aa14.88□□□□□ -0.03
LIG1-216ENST00000598938 OR13A1Q8NGR1 328 aa14.88□□□□□ -0.03
LIG1-216ENST00000598938 RAB2BQ8WUD1 216 aa14.88□□□□□ -0.03
LIG1-216ENST00000598938 SULT4A1Q9BR01 284 aa14.88□□□□□ -0.03
LIG1-216ENST00000598938 SIRT7Q9NRC8 400 aa14.88□□□□□ -0.03
LIG1-216ENST00000598938 NUP50Q9UKX7 468 aa14.88□□□□□ -0.03
LIG1-216ENST00000598938 HSF4Q9ULV5 492 aa14.88□□□□□ -0.03
LIG1-216ENST00000598938 ETV7Q9Y603 341 aa14.88□□□□□ -0.03
LIG1-216ENST00000598938 CENPVL3A0A0U1RRI6 287 aa14.87□□□□□ -0.03
LIG1-216ENST00000598938 hCG_1809904A0A1W2PP81 198 aa14.87□□□□□ -0.03
LIG1-216ENST00000598938 A0A1W2PPE2 198 aa14.87□□□□□ -0.03
LIG1-216ENST00000598938 A0A1W2PR64 198 aa14.87□□□□□ -0.03
LIG1-216ENST00000598938 A0A1W2PRV1 198 aa14.87□□□□□ -0.03
LIG1-216ENST00000598938 UBE2QL1A1L167 161 aa14.87□□□□□ -0.03
LIG1-216ENST00000598938 MT-ND4P03905 459 aa14.87□□□□□ -0.03
LIG1-216ENST00000598938 CGB3P0DN86 165 aa14.87□□□□□ -0.03
LIG1-216ENST00000598938 CGB7P0DN87 165 aa14.87□□□□□ -0.03
LIG1-216ENST00000598938 DLX1P56177 255 aa14.87□□□□□ -0.03
LIG1-216ENST00000598938 ERVFRD-1P60508 538 aa14.87□□□□□ -0.03
LIG1-216ENST00000598938 OR5H6Q8NGV6 325 aa14.87□□□□□ -0.03
LIG1-216ENST00000598938 NDNFQ8TB73 568 aa14.87□□□□□ -0.03
LIG1-216ENST00000598938 DYRK2Q92630 601 aa14.87□□□□□ -0.03
LIG1-216ENST00000598938 LHX4Q969G2 390 aa14.87□□□□□ -0.03
LIG1-216ENST00000598938 FAAP24Q9BTP7 215 aa14.87□□□□□ -0.03
LIG1-216ENST00000598938 DCSTAMPQ9H295 470 aa14.87□□□□□ -0.03
LIG1-216ENST00000598938 GAL3ST2Q9H3Q3 398 aa14.87□□□□□ -0.03
LIG1-216ENST00000598938 ABRACLQ9P1F3 81 aa14.87□□□□□ -0.03
LIG1-216ENST00000598938 TENM1Q9UKZ4 2725 aa14.86□□□□□ -0.03
LIG1-216ENST00000598938 IGHV3OR16-10A0A075B7F0 116 aa14.86□□□□□ -0.03
LIG1-216ENST00000598938 METTL21EPA6NDL7 271 aa14.86□□□□□ -0.03
LIG1-216ENST00000598938 ZNF729A6NN14 1252 aaPredicted RBP14.86□□□□□ -0.03
LIG1-216ENST00000598938 RNASEK-C17orf49H0YIS7 233 aa14.86□□□□□ -0.03
LIG1-216ENST00000598938 RAB27BO00194 218 aa14.86□□□□□ -0.03
LIG1-216ENST00000598938 CLPXO76031 633 aa14.86□□□□□ -0.03
LIG1-216ENST00000598938 IGHV1-8P0DP01 117 aa14.86□□□□□ -0.03
LIG1-216ENST00000598938 EPHA1P21709 976 aa14.86□□□□□ -0.03
LIG1-216ENST00000598938 GLP1RP43220 463 aa14.86□□□□□ -0.03
LIG1-216ENST00000598938 C17orf58Q2M2W7 97 aa14.86□□□□□ -0.03
LIG1-216ENST00000598938 MOGAT2Q3SYC2 334 aa14.86□□□□□ -0.03
LIG1-216ENST00000598938 PLAC9Q5JTB6 97 aa14.86□□□□□ -0.03
LIG1-216ENST00000598938 GPR157Q5UAW9 335 aa14.86□□□□□ -0.03
LIG1-216ENST00000598938 NCR3LG1Q68D85 454 aa14.86□□□□□ -0.03
LIG1-216ENST00000598938 HCP5Q6MZN7 132 aa14.86□□□□□ -0.03
LIG1-216ENST00000598938 ZNF565Q8N9K5 539 aa14.86□□□□□ -0.03
LIG1-216ENST00000598938 ARHGAP5-AS1Q96IT6 56 aa14.86□□□□□ -0.03
LIG1-216ENST00000598938 PECRQ9BY49 303 aa14.86□□□□□ -0.03
LIG1-216ENST00000598938 LINC00574Q9H8X3 128 aa14.86□□□□□ -0.03
LIG1-216ENST00000598938 PLEKHJ1Q9NW61 149 aa14.86□□□□□ -0.03
LIG1-216ENST00000598938 SPATA2Q9UM82 520 aa14.86□□□□□ -0.03
LIG1-216ENST00000598938 TRAV39A0A0B4J263 110 aa14.85□□□□□ -0.03
LIG1-216ENST00000598938 IGHV1-69DA0A0B4J2H0 117 aa14.85□□□□□ -0.03
LIG1-216ENST00000598938 KBTBD11-OT1A0A1B0GTJ5 212 aa14.85□□□□□ -0.03
LIG1-216ENST00000598938 IGHV1-69P01742 117 aa14.85□□□□□ -0.03
LIG1-216ENST00000598938 BPIFB3P59826 476 aa14.85□□□□□ -0.03
LIG1-216ENST00000598938 PRB3Q04118 309 aaPredicted RBP14.85□□□□□ -0.03
LIG1-216ENST00000598938 KLRD1Q13241 179 aa14.85□□□□□ -0.03
LIG1-216ENST00000598938 Q6ZTK2 550 aa14.85□□□□□ -0.03
LIG1-216ENST00000598938 C9orf139Q6ZV77 190 aa14.85□□□□□ -0.03
LIG1-216ENST00000598938 OR10R2Q8NGX6 335 aa14.85□□□□□ -0.03
LIG1-216ENST00000598938 MRPL30Q8TCC3 161 aaKnown RBP14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms