RNA–Protein interactions for RNA: ENST00000598896.5

SYMPK-212, Transcript of symplekin, humanhuman

TSL 1 (best)

Gene SYMPK, Length 1,899 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYMPK-212ENST00000598896 GAFA1Q96PS6 74 aa19.48■□□□□ 0.71
SYMPK-212ENST00000598896 RAB1BQ9H0U4 201 aa19.48■□□□□ 0.71
SYMPK-212ENST00000598896 LIME1Q9H400 295 aa19.48■□□□□ 0.71
SYMPK-212ENST00000598896 FBXO9Q9UK97 447 aaPredicted RBP19.48■□□□□ 0.71
SYMPK-212ENST00000598896 PPIAL4EA0A075B759 164 aa19.47■□□□□ 0.71
SYMPK-212ENST00000598896 PPIAL4DF5H284 164 aa19.47■□□□□ 0.71
SYMPK-212ENST00000598896 PPIAL4FP0DN26 164 aa19.47■□□□□ 0.71
SYMPK-212ENST00000598896 TSPAN5P62079 268 aa19.47■□□□□ 0.71
SYMPK-212ENST00000598896 HERPUD1Q15011 391 aa19.47■□□□□ 0.71
SYMPK-212ENST00000598896 ZMYND11Q15326 602 aa19.47■□□□□ 0.71
SYMPK-212ENST00000598896 HFEQ30201 348 aa19.47■□□□□ 0.71
SYMPK-212ENST00000598896 ZNF788Q6ZQV5 615 aa19.47■□□□□ 0.71
SYMPK-212ENST00000598896 SNX22Q96L94 193 aa19.47■□□□□ 0.71
SYMPK-212ENST00000598896 CCL13Q99616 98 aa19.47■□□□□ 0.71
SYMPK-212ENST00000598896 BEX2Q9BXY8 128 aa19.47■□□□□ 0.71
SYMPK-212ENST00000598896 BEX1Q9HBH7 125 aa19.47■□□□□ 0.71
SYMPK-212ENST00000598896 MBNL3Q9NUK0 354 aaKnown RBP19.47■□□□□ 0.71
SYMPK-212ENST00000598896 NECAP2Q9NVZ3 263 aa19.47■□□□□ 0.71
SYMPK-212ENST00000598896 KIF25Q9UIL4 384 aa19.47■□□□□ 0.71
SYMPK-212ENST00000598896 PPIAL4AQ9Y536 164 aa19.47■□□□□ 0.71
SYMPK-212ENST00000598896 K7N7A8 449 aa19.46■□□□□ 0.71
SYMPK-212ENST00000598896 OR5H8P0DN80 308 aa19.46■□□□□ 0.71
SYMPK-212ENST00000598896 KCNJ3P48549 501 aa19.46■□□□□ 0.71
SYMPK-212ENST00000598896 BTG1P62324 171 aa19.46■□□□□ 0.71
SYMPK-212ENST00000598896 ZNF660Q6AZW8 331 aaPredicted RBP19.46■□□□□ 0.71
SYMPK-212ENST00000598896 SLC35E4Q6ICL7 350 aa19.46■□□□□ 0.71
SYMPK-212ENST00000598896 FAM216BQ8N7L0 139 aa19.46■□□□□ 0.71
SYMPK-212ENST00000598896 TRAPPC2LQ9UL33 140 aa19.46■□□□□ 0.71
SYMPK-212ENST00000598896 TRAV38-1A0A0B4J264 116 aa19.45■□□□□ 0.7
SYMPK-212ENST00000598896 TMEM30CPA0ZSE6 113 aa19.45■□□□□ 0.7
SYMPK-212ENST00000598896 TRDCB7Z8K6 153 aa19.45■□□□□ 0.7
SYMPK-212ENST00000598896 H7C1Q1 480 aa19.45■□□□□ 0.7
SYMPK-212ENST00000598896 FABP7O15540 132 aa19.45■□□□□ 0.7
SYMPK-212ENST00000598896 CDKN1AP38936 164 aa19.45■□□□□ 0.7
SYMPK-212ENST00000598896 GLIPR1P48060 266 aa19.45■□□□□ 0.7
SYMPK-212ENST00000598896 KRBOX4Q5JUW0 171 aa19.45■□□□□ 0.7
SYMPK-212ENST00000598896 AADACL3Q5VUY0 350 aa19.45■□□□□ 0.7
SYMPK-212ENST00000598896 LHFPL1Q86WI0 220 aa19.45■□□□□ 0.7
SYMPK-212ENST00000598896 ZNF561Q8N587 486 aa19.45■□□□□ 0.7
SYMPK-212ENST00000598896 SLC25A21Q9BQT8 299 aaPredicted RBP19.45■□□□□ 0.7
SYMPK-212ENST00000598896 CLEC4MQ9H2X3 399 aaPredicted RBP19.45■□□□□ 0.7
SYMPK-212ENST00000598896 IGKV1-6A0A0C4DH72 117 aa19.45■□□□□ 0.7
SYMPK-212ENST00000598896 KIR2DS1A0A191URI9 304 aa19.45■□□□□ 0.7
SYMPK-212ENST00000598896 PEX14O75381 377 aa19.45■□□□□ 0.7
SYMPK-212ENST00000598896 RP2O75695 350 aa19.45■□□□□ 0.7
SYMPK-212ENST00000598896 TK1P04183 234 aa19.45■□□□□ 0.7
SYMPK-212ENST00000598896 ANXA7P20073 488 aaKnown RBP19.45■□□□□ 0.7
SYMPK-212ENST00000598896 KIR2DS4P43632 304 aa19.45■□□□□ 0.7
SYMPK-212ENST00000598896 RAG2P55895 527 aa19.45■□□□□ 0.7
SYMPK-212ENST00000598896 PAX5Q02548 391 aa19.45■□□□□ 0.7
SYMPK-212ENST00000598896 EDDM3AQ14507 147 aa19.45■□□□□ 0.7
SYMPK-212ENST00000598896 KIR2DS1Q14954 304 aa19.45■□□□□ 0.7
SYMPK-212ENST00000598896 TERB2Q8NHR7 220 aa19.45■□□□□ 0.7
SYMPK-212ENST00000598896 TMPRSS13Q9BYE2 586 aa19.45■□□□□ 0.7
SYMPK-212ENST00000598896 ZNF665Q9H7R5 613 aa19.45■□□□□ 0.7
SYMPK-212ENST00000598896 PLEKHF2Q9H8W4 249 aa19.45■□□□□ 0.7
SYMPK-212ENST00000598896 VSIG4Q9Y279 399 aa19.45■□□□□ 0.7
SYMPK-212ENST00000598896 ALG5Q9Y673 324 aa19.45■□□□□ 0.7
SYMPK-212ENST00000598896 HLA-DRB3P79483 266 aa19.44■□□□□ 0.7
SYMPK-212ENST00000598896 GIMAP1Q8WWP7 306 aa19.44■□□□□ 0.7
SYMPK-212ENST00000598896 KIAA2026Q5HYC2 2103 aa19.44■□□□□ 0.7
SYMPK-212ENST00000598896 MEIKINA0A087WXM9 373 aa19.43■□□□□ 0.7
SYMPK-212ENST00000598896 POM121CA8CG34 1229 aa19.43■□□□□ 0.7
SYMPK-212ENST00000598896 MGST3O14880 152 aa19.43■□□□□ 0.7
SYMPK-212ENST00000598896 TLE4Q04727 773 aa19.43■□□□□ 0.7
SYMPK-212ENST00000598896 ATPAF1Q5TC12 328 aaPredicted RBP19.43■□□□□ 0.7
SYMPK-212ENST00000598896 MOB1BQ7L9L4 216 aa19.43■□□□□ 0.7
SYMPK-212ENST00000598896 ZNF2Q9BSG1 426 aaPredicted RBP19.43■□□□□ 0.7
SYMPK-212ENST00000598896 MEX3AA1L020 520 aaKnown RBP19.43■□□□□ 0.7
SYMPK-212ENST00000598896 OR5H14A6NHG9 310 aa19.43■□□□□ 0.7
SYMPK-212ENST00000598896 SIGLEC5O15389 551 aa19.43■□□□□ 0.7
SYMPK-212ENST00000598896 TMPRSS2O15393 492 aa19.43■□□□□ 0.7
SYMPK-212ENST00000598896 DHFRP00374 187 aa19.43■□□□□ 0.7
SYMPK-212ENST00000598896 RLN1P04808 185 aa19.43■□□□□ 0.7
SYMPK-212ENST00000598896 NPY4RP50391 375 aa19.43■□□□□ 0.7
SYMPK-212ENST00000598896 MECP2P51608 486 aaKnown RBP19.43■□□□□ 0.7
SYMPK-212ENST00000598896 TMEM17Q86X19 198 aa19.43■□□□□ 0.7
SYMPK-212ENST00000598896 TMEM185AQ8NFB2 350 aa19.43■□□□□ 0.7
SYMPK-212ENST00000598896 OR6F1Q8NGZ6 308 aa19.43■□□□□ 0.7
SYMPK-212ENST00000598896 PPP1R35Q8TAP8 253 aa19.43■□□□□ 0.7
SYMPK-212ENST00000598896 MARCH1Q8TCQ1 289 aa19.43■□□□□ 0.7
SYMPK-212ENST00000598896 TNFRSF13BO14836 293 aaPredicted RBP19.42■□□□□ 0.7
SYMPK-212ENST00000598896 SEC61A1P61619 476 aaKnown RBP19.42■□□□□ 0.7
SYMPK-212ENST00000598896 DHRS11Q6UWP2 260 aa19.42■□□□□ 0.7
SYMPK-212ENST00000598896 FGFRL1Q8N441 504 aa19.42■□□□□ 0.7
SYMPK-212ENST00000598896 UBALD1Q8TB05 177 aa19.42■□□□□ 0.7
SYMPK-212ENST00000598896 NEU4Q8WWR8 484 aaPredicted RBP19.42■□□□□ 0.7
SYMPK-212ENST00000598896 DCTN5Q9BTE1 182 aa19.42■□□□□ 0.7
SYMPK-212ENST00000598896 CRYBG3Q68DQ2 2970 aa19.42■□□□□ 0.7
SYMPK-212ENST00000598896 TENM4Q6N022 2769 aa19.41■□□□□ 0.7
SYMPK-212ENST00000598896 A0A0A6YYJ9 748 aa19.41■□□□□ 0.7
SYMPK-212ENST00000598896 J3QKU1 62 aa19.41■□□□□ 0.7
SYMPK-212ENST00000598896 BET1O15155 118 aa19.41■□□□□ 0.7
SYMPK-212ENST00000598896 NDUFS7O75251 213 aa19.41■□□□□ 0.7
SYMPK-212ENST00000598896 FCN3O75636 299 aa19.41■□□□□ 0.7
SYMPK-212ENST00000598896 IL13RA1P78552 427 aa19.41■□□□□ 0.7
SYMPK-212ENST00000598896 HMGN3Q15651 99 aa19.41■□□□□ 0.7
SYMPK-212ENST00000598896 SP5Q6BEB4 398 aaPredicted RBP19.41■□□□□ 0.7
SYMPK-212ENST00000598896 PRR18Q8N4B5 295 aa19.41■□□□□ 0.7
SYMPK-212ENST00000598896 OR13A1Q8NGR1 328 aa19.41■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms