RNA–Protein interactions for RNA: ENST00000597325.1

SHKBP1-213, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 366 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-213ENST00000597325 BRICD5Q6PL45 260 aa10.01□□□□□ -0.81
SHKBP1-213ENST00000597325 ZNF788Q6ZQV5 615 aa10.01□□□□□ -0.81
SHKBP1-213ENST00000597325 GDPD3Q7L5L3 318 aa10.01□□□□□ -0.81
SHKBP1-213ENST00000597325 OR8H2Q8N162 312 aa10.01□□□□□ -0.81
SHKBP1-213ENST00000597325 MFSD4AQ8N468 514 aa10.01□□□□□ -0.81
SHKBP1-213ENST00000597325 BPIFB2Q8N4F0 458 aa10.01□□□□□ -0.81
SHKBP1-213ENST00000597325 OR8B3Q8NGG8 313 aa10.01□□□□□ -0.81
SHKBP1-213ENST00000597325 OR5D13Q8NGL4 314 aa10.01□□□□□ -0.81
SHKBP1-213ENST00000597325 C10orf105Q8TEF2 133 aa10.01□□□□□ -0.81
SHKBP1-213ENST00000597325 ZFAND2BQ8WV99 257 aa10.01□□□□□ -0.81
SHKBP1-213ENST00000597325 SNX22Q96L94 193 aa10.01□□□□□ -0.81
SHKBP1-213ENST00000597325 OR8B2Q96RD0 313 aa10.01□□□□□ -0.81
SHKBP1-213ENST00000597325 CMSS1Q9BQ75 279 aaKnown RBP10.01□□□□□ -0.81
SHKBP1-213ENST00000597325 SULT4A1Q9BR01 284 aa10.01□□□□□ -0.81
SHKBP1-213ENST00000597325 FAAP24Q9BTP7 215 aa10.01□□□□□ -0.81
SHKBP1-213ENST00000597325 BPESC1Q9GZL8 116 aa10.01□□□□□ -0.81
SHKBP1-213ENST00000597325 CHST6Q9GZX3 395 aa10.01□□□□□ -0.81
SHKBP1-213ENST00000597325 FAM234AQ9H0X4 552 aa10.01□□□□□ -0.81
SHKBP1-213ENST00000597325 NARFLQ9H6Q4 476 aa10.01□□□□□ -0.81
SHKBP1-213ENST00000597325 TMEM165Q9HC07 324 aa10.01□□□□□ -0.81
SHKBP1-213ENST00000597325 C12orf4Q9NQ89 552 aa10.01□□□□□ -0.81
SHKBP1-213ENST00000597325 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.01□□□□□ -0.81
SHKBP1-213ENST00000597325 MIOXQ9UGB7 285 aa10.01□□□□□ -0.81
SHKBP1-213ENST00000597325 AK3Q9UIJ7 227 aa10.01□□□□□ -0.81
SHKBP1-213ENST00000597325 METRNQ9UJH8 293 aa10.01□□□□□ -0.81
SHKBP1-213ENST00000597325 TMEM82A0PJX8 343 aa10□□□□□ -0.81
SHKBP1-213ENST00000597325 TMEM89A2RUT3 159 aa10□□□□□ -0.81
SHKBP1-213ENST00000597325 FUOMA2VDF0 154 aa10□□□□□ -0.81
SHKBP1-213ENST00000597325 CEACAM18A8MTB9 384 aa10□□□□□ -0.81
SHKBP1-213ENST00000597325 MGST3O14880 152 aa10□□□□□ -0.81
SHKBP1-213ENST00000597325 PSPNO60542 156 aa10□□□□□ -0.81
SHKBP1-213ENST00000597325 CA11O75493 328 aa10□□□□□ -0.81
SHKBP1-213ENST00000597325 LPLP06858 475 aa10□□□□□ -0.81
SHKBP1-213ENST00000597325 NDUFB7P17568 137 aa10□□□□□ -0.81
SHKBP1-213ENST00000597325 OR3A1P47881 315 aa10□□□□□ -0.81
SHKBP1-213ENST00000597325 EDDM3AQ14507 147 aa10□□□□□ -0.81
SHKBP1-213ENST00000597325 RNASE12Q5GAN4 147 aaKnown RBP10□□□□□ -0.81
SHKBP1-213ENST00000597325 TRAPPC6BQ86SZ2 158 aa10□□□□□ -0.81
SHKBP1-213ENST00000597325 RTN4RL2Q86UN3 420 aa10□□□□□ -0.81
SHKBP1-213ENST00000597325 GDPD1Q8N9F7 314 aa10□□□□□ -0.81
SHKBP1-213ENST00000597325 ZNRF1Q8ND25 227 aa10□□□□□ -0.81
SHKBP1-213ENST00000597325 OR4S1Q8NGB4 309 aa10□□□□□ -0.81
SHKBP1-213ENST00000597325 NUDCD2Q8WVJ2 157 aa10□□□□□ -0.81
SHKBP1-213ENST00000597325 FCAMRQ8WWV6 532 aa10□□□□□ -0.81
SHKBP1-213ENST00000597325 ST8SIA4Q92187 359 aa10□□□□□ -0.81
SHKBP1-213ENST00000597325 DYRK2Q92630 601 aa10□□□□□ -0.81
SHKBP1-213ENST00000597325 NEIL1Q96FI4 390 aaPredicted RBP10□□□□□ -0.81
SHKBP1-213ENST00000597325 ABHD1Q96SE0 405 aa10□□□□□ -0.81
SHKBP1-213ENST00000597325 SCPEP1Q9HB40 452 aa10□□□□□ -0.81
SHKBP1-213ENST00000597325 IFT46Q9NQC8 304 aa10□□□□□ -0.81
SHKBP1-213ENST00000597325 ING3Q9NXR8 418 aa10□□□□□ -0.81
SHKBP1-213ENST00000597325 KAAG1Q9UBP8 84 aa10□□□□□ -0.81
SHKBP1-213ENST00000597325 SLC25A10Q9UBX3 287 aaPredicted RBP10□□□□□ -0.81
SHKBP1-213ENST00000597325 KCNS2Q9ULS6 477 aa10□□□□□ -0.81
SHKBP1-213ENST00000597325 KCNK7Q9Y2U2 307 aa10□□□□□ -0.81
SHKBP1-213ENST00000597325 TMEM30CPA0ZSE6 113 aa9.99□□□□□ -0.81
SHKBP1-213ENST00000597325 GABARAPH6UMI1 98 aa9.99□□□□□ -0.81
SHKBP1-213ENST00000597325 K7N7A8 449 aa9.99□□□□□ -0.81
SHKBP1-213ENST00000597325 SULT1C2O00338 296 aa9.99□□□□□ -0.81
SHKBP1-213ENST00000597325 CTDSPLO15194 276 aa9.99□□□□□ -0.81
SHKBP1-213ENST00000597325 ZNF737O75373 536 aa9.99□□□□□ -0.81
SHKBP1-213ENST00000597325 HLA-DQB1P01920 261 aa9.99□□□□□ -0.81
SHKBP1-213ENST00000597325 TK1P04183 234 aa9.99□□□□□ -0.81
SHKBP1-213ENST00000597325 CSN2P05814 226 aa9.99□□□□□ -0.81
SHKBP1-213ENST00000597325 MELTFP08582 738 aa9.99□□□□□ -0.81
SHKBP1-213ENST00000597325 PTHLHP12272 177 aa9.99□□□□□ -0.81
SHKBP1-213ENST00000597325 SELLP14151 372 aa9.99□□□□□ -0.81
SHKBP1-213ENST00000597325 SLC25A16P16260 332 aa9.99□□□□□ -0.81
SHKBP1-213ENST00000597325 CBX5P45973 191 aa9.99□□□□□ -0.81
SHKBP1-213ENST00000597325 EDDM3BP56851 147 aa9.99□□□□□ -0.81
SHKBP1-213ENST00000597325 ZNF79Q15937 498 aa9.99□□□□□ -0.81
SHKBP1-213ENST00000597325 KRBOX4Q5JUW0 171 aa9.99□□□□□ -0.81
SHKBP1-213ENST00000597325 OLFML2AQ68BL7 652 aa9.99□□□□□ -0.81
SHKBP1-213ENST00000597325 LYPD2Q6UXB3 125 aa9.99□□□□□ -0.81
SHKBP1-213ENST00000597325 C17orf107Q6ZR85 190 aa9.99□□□□□ -0.81
SHKBP1-213ENST00000597325 SETD6Q8TBK2 473 aa9.99□□□□□ -0.81
SHKBP1-213ENST00000597325 SMIM4Q8WVI0 70 aa9.99□□□□□ -0.81
SHKBP1-213ENST00000597325 GCDHQ92947 438 aaPredicted RBP9.99□□□□□ -0.81
SHKBP1-213ENST00000597325 RAB39BQ96DA2 213 aa9.99□□□□□ -0.81
SHKBP1-213ENST00000597325 SOSTQ9BQB4 213 aa9.99□□□□□ -0.81
SHKBP1-213ENST00000597325 SRRQ9GZT4 340 aa9.99□□□□□ -0.81
SHKBP1-213ENST00000597325 RIMS4Q9H426 269 aaPredicted RBP9.99□□□□□ -0.81
SHKBP1-213ENST00000597325 CTSZQ9UBR2 303 aa9.99□□□□□ -0.81
SHKBP1-213ENST00000597325 MAB21L2Q9Y586 359 aa9.99□□□□□ -0.81
SHKBP1-213ENST00000597325 A0A1B0GW55 424 aa9.98□□□□□ -0.81
SHKBP1-213ENST00000597325 MEIS3P1A6NDR6 274 aa9.98□□□□□ -0.81
SHKBP1-213ENST00000597325 DVL1O14640 695 aa9.98□□□□□ -0.81
SHKBP1-213ENST00000597325 TNFRSF13BO14836 293 aaPredicted RBP9.98□□□□□ -0.81
SHKBP1-213ENST00000597325 VENTXO95231 258 aa9.98□□□□□ -0.81
SHKBP1-213ENST00000597325 DUX4L2P0CJ85 424 aa9.98□□□□□ -0.81
SHKBP1-213ENST00000597325 DUX4L3P0CJ86 424 aa9.98□□□□□ -0.81
SHKBP1-213ENST00000597325 DUX4L4P0CJ87 422 aa9.98□□□□□ -0.81
SHKBP1-213ENST00000597325 DUX4L5P0CJ88 424 aa9.98□□□□□ -0.81
SHKBP1-213ENST00000597325 DUX4L6P0CJ89 424 aa9.98□□□□□ -0.81
SHKBP1-213ENST00000597325 DUX4L7P0CJ90 424 aa9.98□□□□□ -0.81
SHKBP1-213ENST00000597325 AMY2BP19961 511 aa9.98□□□□□ -0.81
SHKBP1-213ENST00000597325 HNF1AP20823 631 aa9.98□□□□□ -0.81
SHKBP1-213ENST00000597325 CD40LGP29965 261 aa9.98□□□□□ -0.81
SHKBP1-213ENST00000597325 INPP1P49441 399 aa9.98□□□□□ -0.81
SHKBP1-213ENST00000597325 NPY4RP50391 375 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms