RNA–Protein interactions for RNA: ENST00000596378.1

SRRM1-222, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 1 (best)

Gene SRRM1, Length 2,314 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-222ENST00000596378 NHLH2Q02577 135 aa19.32■□□□□ 0.68
SRRM1-222ENST00000596378 ZNF169Q14929 603 aaPredicted RBP19.32■□□□□ 0.68
SRRM1-222ENST00000596378 KIR2DS1Q14954 304 aa19.32■□□□□ 0.68
SRRM1-222ENST00000596378 SAT2Q96F10 170 aaPredicted RBP19.32■□□□□ 0.68
SRRM1-222ENST00000596378 RHOFQ9HBH0 211 aa19.32■□□□□ 0.68
SRRM1-222ENST00000596378 DLL3Q9NYJ7 618 aa19.32■□□□□ 0.68
SRRM1-222ENST00000596378 ZNF175Q9Y473 711 aa19.32■□□□□ 0.68
SRRM1-222ENST00000596378 CDRT15L2A8MXV6 281 aa19.31■□□□□ 0.68
SRRM1-222ENST00000596378 TUSC2O75896 110 aa19.31■□□□□ 0.68
SRRM1-222ENST00000596378 ZNF44P15621 663 aa19.31■□□□□ 0.68
SRRM1-222ENST00000596378 PCSK4Q6UW60 755 aa19.31■□□□□ 0.68
SRRM1-222ENST00000596378 ZNF695Q8IW36 515 aa19.31■□□□□ 0.68
SRRM1-222ENST00000596378 F8W036 122 aa19.31■□□□□ 0.68
SRRM1-222ENST00000596378 GPR137BO60478 399 aa19.31■□□□□ 0.68
SRRM1-222ENST00000596378 MUC1P15941 1255 aaPredicted RBP19.31■□□□□ 0.68
SRRM1-222ENST00000596378 SELEP16581 610 aa19.31■□□□□ 0.68
SRRM1-222ENST00000596378 BLOC1S1P78537 153 aa19.31■□□□□ 0.68
SRRM1-222ENST00000596378 IL34Q6ZMJ4 242 aa19.31■□□□□ 0.68
SRRM1-222ENST00000596378 SELENOHQ8IZQ5 122 aaKnown RBP19.31■□□□□ 0.68
SRRM1-222ENST00000596378 FAM185AQ8N0U4 392 aa19.31■□□□□ 0.68
SRRM1-222ENST00000596378 LILRB1Q8NHL6 650 aaPredicted RBP19.31■□□□□ 0.68
SRRM1-222ENST00000596378 TLNRD1Q9H1K6 362 aa19.31■□□□□ 0.68
SRRM1-222ENST00000596378 PLK3Q9H4B4 646 aa19.31■□□□□ 0.68
SRRM1-222ENST00000596378 PRR14LQ5THK1 2151 aa19.3■□□□□ 0.68
SRRM1-222ENST00000596378 TPD52L2O43399 206 aaKnown RBP19.3■□□□□ 0.68
SRRM1-222ENST00000596378 PPP1CBP62140 327 aa19.3■□□□□ 0.68
SRRM1-222ENST00000596378 Q6ZRG5 221 aa19.3■□□□□ 0.68
SRRM1-222ENST00000596378 UBAC2Q8NBM4 344 aa19.3■□□□□ 0.68
SRRM1-222ENST00000596378 CLCF1Q9UBD9 225 aa19.3■□□□□ 0.68
SRRM1-222ENST00000596378 TRIM77I1YAP6 450 aa19.3■□□□□ 0.68
SRRM1-222ENST00000596378 J3QT63 122 aa19.3■□□□□ 0.68
SRRM1-222ENST00000596378 UBE2NP61088 152 aaKnown RBP19.3■□□□□ 0.68
SRRM1-222ENST00000596378 PKIBQ9C010 78 aa19.3■□□□□ 0.68
SRRM1-222ENST00000596378 SPACA1Q9HBV2 294 aa19.3■□□□□ 0.68
SRRM1-222ENST00000596378 UQCC1Q9NVA1 299 aa19.3■□□□□ 0.68
SRRM1-222ENST00000596378 POMT1Q9Y6A1 747 aa19.3■□□□□ 0.68
SRRM1-222ENST00000596378 NXPH3O95157 252 aa19.29■□□□□ 0.68
SRRM1-222ENST00000596378 IL13RA2Q14627 380 aa19.29■□□□□ 0.68
SRRM1-222ENST00000596378 LINC00596Q86U02 117 aa19.29■□□□□ 0.68
SRRM1-222ENST00000596378 CNEP1R1Q8N9A8 125 aa19.29■□□□□ 0.68
SRRM1-222ENST00000596378 IL1F10Q8WWZ1 152 aa19.29■□□□□ 0.68
SRRM1-222ENST00000596378 KIRREL1Q96J84 757 aa19.29■□□□□ 0.68
SRRM1-222ENST00000596378 TMEM56Q96MV1 263 aa19.29■□□□□ 0.68
SRRM1-222ENST00000596378 MAGT1Q9H0U3 335 aa19.29■□□□□ 0.68
SRRM1-222ENST00000596378 TMEM56-RWDD3S4R434 201 aa19.29■□□□□ 0.68
SRRM1-222ENST00000596378 SIRPB1O00241 398 aa19.29■□□□□ 0.68
SRRM1-222ENST00000596378 SLC33A1O00400 549 aaPredicted RBP19.29■□□□□ 0.68
SRRM1-222ENST00000596378 DEGS1O15121 323 aa19.29■□□□□ 0.68
SRRM1-222ENST00000596378 ADAM20O43506 726 aa19.29■□□□□ 0.68
SRRM1-222ENST00000596378 P2RY1P47900 373 aa19.29■□□□□ 0.68
SRRM1-222ENST00000596378 RND3P61587 244 aa19.29■□□□□ 0.68
SRRM1-222ENST00000596378 POLR2GP62487 172 aaKnown RBP eCLIP19.29■□□□□ 0.68
SRRM1-222ENST00000596378 SCCPDHQ8NBX0 429 aa19.29■□□□□ 0.68
SRRM1-222ENST00000596378 UBALD1Q8TB05 177 aa19.29■□□□□ 0.68
SRRM1-222ENST00000596378 SH3BGRL3Q9H299 93 aa19.29■□□□□ 0.68
SRRM1-222ENST00000596378 CDH20Q9HBT6 801 aa19.29■□□□□ 0.68
SRRM1-222ENST00000596378 ASCL3Q9NQ33 180 aa19.29■□□□□ 0.68
SRRM1-222ENST00000596378 NUDT19A8MXV4 375 aa19.28■□□□□ 0.68
SRRM1-222ENST00000596378 CAV2P51636 162 aa19.28■□□□□ 0.68
SRRM1-222ENST00000596378 Q6P435 159 aa19.28■□□□□ 0.68
SRRM1-222ENST00000596378 TMEM88Q6PEY1 159 aa19.28■□□□□ 0.68
SRRM1-222ENST00000596378 BTNL8Q6UX41 500 aa19.28■□□□□ 0.68
SRRM1-222ENST00000596378 PRR18Q8N4B5 295 aa19.28■□□□□ 0.68
SRRM1-222ENST00000596378 SLC25A40Q8TBP6 338 aa19.28■□□□□ 0.68
SRRM1-222ENST00000596378 RTL8AQ9BWD3 113 aa19.28■□□□□ 0.68
SRRM1-222ENST00000596378 CNOT1A5YKK6 2376 aaKnown RBP19.28■□□□□ 0.68
SRRM1-222ENST00000596378 OR8U9P0C7N5 309 aa19.28■□□□□ 0.68
SRRM1-222ENST00000596378 SRPXP78539 464 aa19.28■□□□□ 0.68
SRRM1-222ENST00000596378 CXorf66Q5JRM2 361 aaPredicted RBP19.28■□□□□ 0.68
SRRM1-222ENST00000596378 OR8U1Q8NH10 309 aa19.28■□□□□ 0.68
SRRM1-222ENST00000596378 OR1A1Q9P1Q5 309 aa19.28■□□□□ 0.68
SRRM1-222ENST00000596378 FAM24AA6NFZ4 105 aa19.27■□□□□ 0.68
SRRM1-222ENST00000596378 H0YL77 283 aa19.27■□□□□ 0.68
SRRM1-222ENST00000596378 HLA-DRB3P79483 266 aa19.27■□□□□ 0.68
SRRM1-222ENST00000596378 GPR157Q5UAW9 335 aa19.27■□□□□ 0.68
SRRM1-222ENST00000596378 SVBPQ8N300 66 aa19.27■□□□□ 0.68
SRRM1-222ENST00000596378 CDIPTO14735 213 aa19.26■□□□□ 0.67
SRRM1-222ENST00000596378 AGFG2O95081 481 aa19.26■□□□□ 0.67
SRRM1-222ENST00000596378 CDS2O95674 445 aa19.26■□□□□ 0.67
SRRM1-222ENST00000596378 CTXN2P0C2S0 81 aa19.26■□□□□ 0.67
SRRM1-222ENST00000596378 NKX2-1P43699 371 aaPredicted RBP19.26■□□□□ 0.67
SRRM1-222ENST00000596378 FHITP49789 147 aa19.26■□□□□ 0.67
SRRM1-222ENST00000596378 HOXA4Q00056 320 aaPredicted RBP19.26■□□□□ 0.67
SRRM1-222ENST00000596378 GNMTQ14749 295 aa19.26■□□□□ 0.67
SRRM1-222ENST00000596378 ZNF324BQ6AW86 544 aaPredicted RBP19.26■□□□□ 0.67
SRRM1-222ENST00000596378 VWA1Q6PCB0 445 aa19.26■□□□□ 0.67
SRRM1-222ENST00000596378 FAM214BQ7L5A3 538 aa19.26■□□□□ 0.67
SRRM1-222ENST00000596378 HSD17B11Q8NBQ5 300 aa19.26■□□□□ 0.67
SRRM1-222ENST00000596378 PLPPR1Q8TBJ4 325 aa19.26■□□□□ 0.67
SRRM1-222ENST00000596378 NRIP2Q9BQI9 281 aa19.26■□□□□ 0.67
SRRM1-222ENST00000596378 ARV1Q9H2C2 271 aa19.26■□□□□ 0.67
SRRM1-222ENST00000596378 RIMS4Q9H426 269 aaPredicted RBP19.26■□□□□ 0.67
SRRM1-222ENST00000596378 PARP11Q9NR21 331 aa19.26■□□□□ 0.67
SRRM1-222ENST00000596378 GALR2O43603 387 aaPredicted RBP19.26■□□□□ 0.67
SRRM1-222ENST00000596378 SSSCA1O60232 199 aa19.26■□□□□ 0.67
SRRM1-222ENST00000596378 PGLYRP1O75594 196 aaPredicted RBP19.26■□□□□ 0.67
SRRM1-222ENST00000596378 IGHG3P01860 377 aa19.26■□□□□ 0.67
SRRM1-222ENST00000596378 CD82P27701 267 aa19.26■□□□□ 0.67
SRRM1-222ENST00000596378 EWSR1Q01844 656 aaKnown RBP eCLIP19.26■□□□□ 0.67
SRRM1-222ENST00000596378 TGFBR3Q03167 851 aa19.26■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms