RNA–Protein interactions for RNA: ENST00000596104.5

LIG1-209, Transcript of DNA ligase 1, humanhuman

TSL 3

Gene LIG1, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-209ENST00000596104 LIN7CQ9NUP9 197 aaKnown RBP7.8□□□□□ -1.16
LIG1-209ENST00000596104 POMPQ9Y244 141 aa7.8□□□□□ -1.16
LIG1-209ENST00000596104 MYRFQ9Y2G1 1151 aa7.8□□□□□ -1.16
LIG1-209ENST00000596104 ZNF256Q9Y2P7 627 aaPredicted RBP7.8□□□□□ -1.16
LIG1-209ENST00000596104 IGHV3-72A0A0B4J1Y9 119 aa7.79□□□□□ -1.16
LIG1-209ENST00000596104 IGHV1-3A0A0C4DH29 117 aa7.79□□□□□ -1.16
LIG1-209ENST00000596104 OR4C45A6NMZ5 311 aa7.79□□□□□ -1.16
LIG1-209ENST00000596104 CCRL2O00421 344 aa7.79□□□□□ -1.16
LIG1-209ENST00000596104 HSD17B6O14756 317 aa7.79□□□□□ -1.16
LIG1-209ENST00000596104 IGHG4P01861 327 aa7.79□□□□□ -1.16
LIG1-209ENST00000596104 OCM2P0CE71 109 aa7.79□□□□□ -1.16
LIG1-209ENST00000596104 OCMP0CE72 109 aaPredicted RBP7.79□□□□□ -1.16
LIG1-209ENST00000596104 DBTP11182 482 aaKnown RBP7.79□□□□□ -1.16
LIG1-209ENST00000596104 C21orf33P30042 268 aaPredicted RBP7.79□□□□□ -1.16
LIG1-209ENST00000596104 SSTR5P35346 364 aa7.79□□□□□ -1.16
LIG1-209ENST00000596104 ATP6V1E1P36543 226 aa7.79□□□□□ -1.16
LIG1-209ENST00000596104 REG1BP48304 166 aa7.79□□□□□ -1.16
LIG1-209ENST00000596104 MTNR1BP49286 362 aa7.79□□□□□ -1.16
LIG1-209ENST00000596104 CCR9P51686 369 aa7.79□□□□□ -1.16
LIG1-209ENST00000596104 ATP6AP1Q15904 470 aa7.79□□□□□ -1.16
LIG1-209ENST00000596104 LTC4SQ16873 150 aa7.79□□□□□ -1.16
LIG1-209ENST00000596104 PAN3Q58A45 887 aaKnown RBP7.79□□□□□ -1.16
LIG1-209ENST00000596104 ELP2Q6IA86 826 aa7.79□□□□□ -1.16
LIG1-209ENST00000596104 TMEM104Q8NE00 496 aa7.79□□□□□ -1.16
LIG1-209ENST00000596104 OR10A7Q8NGE5 316 aa7.79□□□□□ -1.16
LIG1-209ENST00000596104 OR8J1Q8NGP2 316 aa7.79□□□□□ -1.16
LIG1-209ENST00000596104 OR10X1Q8NGY0 326 aa7.79□□□□□ -1.16
LIG1-209ENST00000596104 CNIH3Q8TBE1 160 aa7.79□□□□□ -1.16
LIG1-209ENST00000596104 PLPPR1Q8TBJ4 325 aa7.79□□□□□ -1.16
LIG1-209ENST00000596104 MRGPRDQ8TDS7 321 aa7.79□□□□□ -1.16
LIG1-209ENST00000596104 C4orf3Q8WVX3 66 aa7.79□□□□□ -1.16
LIG1-209ENST00000596104 GON7Q9BXV9 100 aa7.79□□□□□ -1.16
LIG1-209ENST00000596104 GABARAPL1Q9H0R8 117 aa7.79□□□□□ -1.16
LIG1-209ENST00000596104 ZCCHC4Q9H5U6 513 aa7.79□□□□□ -1.16
LIG1-209ENST00000596104 PLSCR3Q9NRY6 295 aa7.79□□□□□ -1.16
LIG1-209ENST00000596104 KIAA2026Q5HYC2 2103 aa7.79□□□□□ -1.16
LIG1-209ENST00000596104 TRAV39A0A0B4J263 110 aa7.78□□□□□ -1.16
LIG1-209ENST00000596104 A0A1W2PPE3 182 aa7.78□□□□□ -1.16
LIG1-209ENST00000596104 NCBP2LA6PVI3 153 aaKnown RBP7.78□□□□□ -1.16
LIG1-209ENST00000596104 G3V2T6 193 aa7.78□□□□□ -1.16
LIG1-209ENST00000596104 J3QRE1 110 aa7.78□□□□□ -1.16
LIG1-209ENST00000596104 SLC16A6O15403 523 aa7.78□□□□□ -1.16
LIG1-209ENST00000596104 MPZL2O60487 215 aa7.78□□□□□ -1.16
LIG1-209ENST00000596104 GAPDHP04406 335 aaKnown RBP7.78□□□□□ -1.16
LIG1-209ENST00000596104 TMEM225BP0DP42 221 aa7.78□□□□□ -1.16
LIG1-209ENST00000596104 PSMB8P28062 276 aa7.78□□□□□ -1.16
LIG1-209ENST00000596104 KISS1Q15726 138 aa7.78□□□□□ -1.16
LIG1-209ENST00000596104 ZNF260Q3ZCT1 412 aa7.78□□□□□ -1.16
LIG1-209ENST00000596104 ASPHD1Q5U4P2 390 aa7.78□□□□□ -1.16
LIG1-209ENST00000596104 KCTD20Q7Z5Y7 419 aa7.78□□□□□ -1.16
LIG1-209ENST00000596104 MOB3BQ86TA1 216 aa7.78□□□□□ -1.16
LIG1-209ENST00000596104 SBSPONQ8IVN8 264 aa7.78□□□□□ -1.16
LIG1-209ENST00000596104 CCDC197Q8NCU1 140 aa7.78□□□□□ -1.16
LIG1-209ENST00000596104 Q8NFD4 153 aa7.78□□□□□ -1.16
LIG1-209ENST00000596104 PXT1Q8NFP0 134 aa7.78□□□□□ -1.16
LIG1-209ENST00000596104 OR13C3Q8NGS6 347 aa7.78□□□□□ -1.16
LIG1-209ENST00000596104 MYOZ3Q8TDC0 251 aa7.78□□□□□ -1.16
LIG1-209ENST00000596104 ST6GALNAC6Q969X2 333 aa7.78□□□□□ -1.16
LIG1-209ENST00000596104 RCHY1Q96PM5 261 aa7.78□□□□□ -1.16
LIG1-209ENST00000596104 CIB1Q99828 191 aa7.78□□□□□ -1.16
LIG1-209ENST00000596104 HSPB9Q9BQS6 159 aa7.78□□□□□ -1.16
LIG1-209ENST00000596104 BARHL1Q9BZE3 327 aa7.78□□□□□ -1.16
LIG1-209ENST00000596104 ZNF581Q9P0T4 197 aa7.78□□□□□ -1.16
LIG1-209ENST00000596104 SIRT4Q9Y6E7 314 aaPredicted RBP7.78□□□□□ -1.16
LIG1-209ENST00000596104 SMAD5-AS1Q9Y6J3 95 aa7.78□□□□□ -1.16
LIG1-209ENST00000596104 HUWE1Q7Z6Z7 4374 aaKnown RBP7.78□□□□□ -1.16
LIG1-209ENST00000596104 RYR2Q92736 4967 aa7.78□□□□□ -1.16
LIG1-209ENST00000596104 HCKP08631 526 aa7.77□□□□□ -1.17
LIG1-209ENST00000596104 HTR1AP08908 422 aa7.77□□□□□ -1.17
LIG1-209ENST00000596104 KCNJ3P48549 501 aa7.77□□□□□ -1.17
LIG1-209ENST00000596104 IL13RA2Q14627 380 aa7.77□□□□□ -1.17
LIG1-209ENST00000596104 ZSCAN26Q16670 478 aa7.77□□□□□ -1.17
LIG1-209ENST00000596104 DNAL1Q4LDG9 190 aa7.77□□□□□ -1.17
LIG1-209ENST00000596104 ZNF691Q5VV52 312 aa7.77□□□□□ -1.17
LIG1-209ENST00000596104 FAM53AQ6NSI3 398 aaPredicted RBP7.77□□□□□ -1.17
LIG1-209ENST00000596104 ZDHHC13Q8IUH4 622 aa7.77□□□□□ -1.17
LIG1-209ENST00000596104 FAM71E2Q8N5Q1 922 aa7.77□□□□□ -1.17
LIG1-209ENST00000596104 LINC00311Q8N616 119 aa7.77□□□□□ -1.17
LIG1-209ENST00000596104 OR2T10Q8NGZ9 312 aa7.77□□□□□ -1.17
LIG1-209ENST00000596104 RFKQ969G6 155 aa7.77□□□□□ -1.17
LIG1-209ENST00000596104 SLC7A6OSQ96CW6 309 aaPredicted RBP7.77□□□□□ -1.17
LIG1-209ENST00000596104 PELI1Q96FA3 418 aa7.77□□□□□ -1.17
LIG1-209ENST00000596104 NR1H4Q96RI1 486 aaPredicted RBP7.77□□□□□ -1.17
LIG1-209ENST00000596104 S1PR3Q99500 378 aa7.77□□□□□ -1.17
LIG1-209ENST00000596104 GABARAPL3Q9BY60 117 aa7.77□□□□□ -1.17
LIG1-209ENST00000596104 GAR1Q9NY12 217 aaKnown RBP7.77□□□□□ -1.17
LIG1-209ENST00000596104 ENOPH1Q9UHY7 261 aa7.77□□□□□ -1.17
LIG1-209ENST00000596104 ZNF580Q9UK33 172 aa7.77□□□□□ -1.17
LIG1-209ENST00000596104 SACSQ9NZJ4 4579 aa7.77□□□□□ -1.17
LIG1-209ENST00000596104 LCE6AA0A183 80 aa7.76□□□□□ -1.17
LIG1-209ENST00000596104 ZNF736B4DX44 427 aaPredicted RBP7.76□□□□□ -1.17
LIG1-209ENST00000596104 C15orf65H3BRN8 121 aa7.76□□□□□ -1.17
LIG1-209ENST00000596104 GYG2O15488 501 aa7.76□□□□□ -1.17
LIG1-209ENST00000596104 SULT1B1O43704 296 aa7.76□□□□□ -1.17
LIG1-209ENST00000596104 RRP9O43818 475 aaKnown RBP7.76□□□□□ -1.17
LIG1-209ENST00000596104 MOSP00540 346 aa7.76□□□□□ -1.17
LIG1-209ENST00000596104 IGF1P05019 195 aa7.76□□□□□ -1.17
LIG1-209ENST00000596104 CD1BP29016 333 aa7.76□□□□□ -1.17
LIG1-209ENST00000596104 INSL3P51460 131 aa7.76□□□□□ -1.17
LIG1-209ENST00000596104 ALKBH1Q13686 389 aaKnown RBP7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms