RNA–Protein interactions for RNA: ENST00000593919.5

VRK3-205, Transcript of vaccinia related kinase 3, humanhuman

TSL 1 (best) BASIC

Gene VRK3, Length 1,979 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-205ENST00000593919 MEGF10Q96KG7 1140 aa11.16□□□□□ -0.62
VRK3-205ENST00000593919 SULT4A1Q9BR01 284 aa11.16□□□□□ -0.62
VRK3-205ENST00000593919 MFFQ9GZY8 342 aa11.16□□□□□ -0.62
VRK3-205ENST00000593919 RHOFQ9HBH0 211 aa11.16□□□□□ -0.62
VRK3-205ENST00000593919 ZDHHC8Q9ULC8 765 aa11.16□□□□□ -0.62
VRK3-205ENST00000593919 HSF4Q9ULV5 492 aa11.16□□□□□ -0.62
VRK3-205ENST00000593919 hCG_1807616A0A1W2PRN6 198 aa11.15□□□□□ -0.62
VRK3-205ENST00000593919 FAM90A10PA6NDY2 464 aa11.15□□□□□ -0.62
VRK3-205ENST00000593919 FAM90A18PA6NE21 464 aa11.15□□□□□ -0.62
VRK3-205ENST00000593919 FAM90A16PA6NEW6 464 aa11.15□□□□□ -0.62
VRK3-205ENST00000593919 OR5H14A6NHG9 310 aa11.15□□□□□ -0.62
VRK3-205ENST00000593919 FAM90A20PA6NIJ5 464 aa11.15□□□□□ -0.62
VRK3-205ENST00000593919 FAM90A8PA6NJQ4 464 aa11.15□□□□□ -0.62
VRK3-205ENST00000593919 FAM90A7PA6NKC0 464 aa11.15□□□□□ -0.62
VRK3-205ENST00000593919 FAM90A22PA8MWA6 464 aa11.15□□□□□ -0.62
VRK3-205ENST00000593919 FAM90A12PA8MX19 464 aa11.15□□□□□ -0.62
VRK3-205ENST00000593919 FAM90A5PA8MXJ8 464 aa11.15□□□□□ -0.62
VRK3-205ENST00000593919 VSTM5A8MXK1 200 aa11.15□□□□□ -0.62
VRK3-205ENST00000593919 FAM90A23PA8MXZ1 464 aa11.15□□□□□ -0.62
VRK3-205ENST00000593919 C19orf84I3L1E1 186 aa11.15□□□□□ -0.62
VRK3-205ENST00000593919 PDCD6O75340 191 aa11.15□□□□□ -0.62
VRK3-205ENST00000593919 NXPH2O95156 264 aa11.15□□□□□ -0.62
VRK3-205ENST00000593919 FAM90A15PP0C7V4 464 aa11.15□□□□□ -0.62
VRK3-205ENST00000593919 FAM90A13PP0C7W8 464 aa11.15□□□□□ -0.62
VRK3-205ENST00000593919 FAM90A14PP0C7W9 464 aa11.15□□□□□ -0.62
VRK3-205ENST00000593919 FAM90A24PP0C7X0 464 aa11.15□□□□□ -0.62
VRK3-205ENST00000593919 RAB14P61106 215 aa11.15□□□□□ -0.62
VRK3-205ENST00000593919 ARL6IP1Q15041 203 aa11.15□□□□□ -0.62
VRK3-205ENST00000593919 CHRFAM7AQ494W8 412 aa11.15□□□□□ -0.62
VRK3-205ENST00000593919 CLLU1Q5K131 121 aa11.15□□□□□ -0.62
VRK3-205ENST00000593919 POC1AQ8NBT0 407 aa11.15□□□□□ -0.62
VRK3-205ENST00000593919 LILRB1Q8NHL6 650 aaPredicted RBP11.15□□□□□ -0.62
VRK3-205ENST00000593919 ITLN1Q8WWA0 313 aa11.15□□□□□ -0.62
VRK3-205ENST00000593919 TMEM204Q9BSN7 226 aa11.15□□□□□ -0.62
VRK3-205ENST00000593919 FAAP24Q9BTP7 215 aa11.15□□□□□ -0.62
VRK3-205ENST00000593919 PPA2Q9H2U2 334 aa11.15□□□□□ -0.62
VRK3-205ENST00000593919 CISD1Q9NZ45 108 aaKnown RBP11.15□□□□□ -0.62
VRK3-205ENST00000593919 COMMD9Q9P000 198 aa11.15□□□□□ -0.62
VRK3-205ENST00000593919 GPR132Q9UNW8 380 aa11.15□□□□□ -0.62
VRK3-205ENST00000593919 UTP20O75691 2785 aaKnown RBP11.14□□□□□ -0.63
VRK3-205ENST00000593919 DUS4LO95620 317 aaKnown RBP11.14□□□□□ -0.63
VRK3-205ENST00000593919 CD8AP01732 235 aa11.14□□□□□ -0.63
VRK3-205ENST00000593919 ACAA1P09110 424 aaPredicted RBP11.14□□□□□ -0.63
VRK3-205ENST00000593919 FUT3P21217 361 aa11.14□□□□□ -0.63
VRK3-205ENST00000593919 APOBEC3AP31941 199 aaPredicted RBP11.14□□□□□ -0.63
VRK3-205ENST00000593919 IKZF1Q13422 519 aa11.14□□□□□ -0.63
VRK3-205ENST00000593919 SLC9A3R2Q15599 337 aa11.14□□□□□ -0.63
VRK3-205ENST00000593919 MPV17LQ2QL34 196 aa11.14□□□□□ -0.63
VRK3-205ENST00000593919 ZNF546Q86UE3 836 aa11.14□□□□□ -0.63
VRK3-205ENST00000593919 OR5AP2Q8NGF4 316 aa11.14□□□□□ -0.63
VRK3-205ENST00000593919 WDR13Q9H1Z4 485 aa11.14□□□□□ -0.63
VRK3-205ENST00000593919 C5orf66Q9H5L9 145 aa11.14□□□□□ -0.63
VRK3-205ENST00000593919 HES4Q9HCC6 221 aa11.14□□□□□ -0.63
VRK3-205ENST00000593919 C1orf123Q9NWV4 160 aa11.14□□□□□ -0.63
VRK3-205ENST00000593919 IL19Q9UHD0 177 aa11.14□□□□□ -0.63
VRK3-205ENST00000593919 DSCAMO60469 2012 aa11.14□□□□□ -0.63
VRK3-205ENST00000593919 IGKV1D-8A0A087WSZ0 117 aa11.14□□□□□ -0.63
VRK3-205ENST00000593919 WNT9BO14905 357 aa11.14□□□□□ -0.63
VRK3-205ENST00000593919 RPA2P15927 270 aa11.14□□□□□ -0.63
VRK3-205ENST00000593919 FPR2P25090 351 aa11.14□□□□□ -0.63
VRK3-205ENST00000593919 TNFAIP6P98066 277 aaPredicted RBP11.14□□□□□ -0.63
VRK3-205ENST00000593919 SRSF4Q08170 494 aaKnown RBP11.14□□□□□ -0.63
VRK3-205ENST00000593919 FGL1Q08830 312 aa11.14□□□□□ -0.63
VRK3-205ENST00000593919 IL13RA2Q14627 380 aa11.14□□□□□ -0.63
VRK3-205ENST00000593919 ZNF672Q499Z4 452 aaPredicted RBP11.14□□□□□ -0.63
VRK3-205ENST00000593919 ESCO2Q56NI9 601 aa11.14□□□□□ -0.63
VRK3-205ENST00000593919 CFAP161Q6P656 301 aa11.14□□□□□ -0.63
VRK3-205ENST00000593919 GSG1LQ6UXU4 331 aa11.14□□□□□ -0.63
VRK3-205ENST00000593919 LINC00596Q86U02 117 aa11.14□□□□□ -0.63
VRK3-205ENST00000593919 MOGAT3Q86VF5 341 aa11.14□□□□□ -0.63
VRK3-205ENST00000593919 COMMD7Q86VX2 200 aa11.14□□□□□ -0.63
VRK3-205ENST00000593919 ZCCHC24Q8N2G6 241 aaKnown RBP11.14□□□□□ -0.63
VRK3-205ENST00000593919 DYRK2Q92630 601 aa11.14□□□□□ -0.63
VRK3-205ENST00000593919 TMEM230Q96A57 120 aa11.14□□□□□ -0.63
VRK3-205ENST00000593919 PRR13Q9NZ81 148 aa11.14□□□□□ -0.63
VRK3-205ENST00000593919 RCC2Q9P258 522 aaKnown RBP11.14□□□□□ -0.63
VRK3-205ENST00000593919 AK3Q9UIJ7 227 aa11.14□□□□□ -0.63
VRK3-205ENST00000593919 KIAA2026Q5HYC2 2103 aa11.13□□□□□ -0.63
VRK3-205ENST00000593919 C13orf42A0A1B0GVH6 325 aa11.13□□□□□ -0.63
VRK3-205ENST00000593919 C5orf51A6NDU8 294 aa11.13□□□□□ -0.63
VRK3-205ENST00000593919 C17orf100A8MU93 164 aa11.13□□□□□ -0.63
VRK3-205ENST00000593919 PRSS44E7EML9 344 aa11.13□□□□□ -0.63
VRK3-205ENST00000593919 CA11O75493 328 aa11.13□□□□□ -0.63
VRK3-205ENST00000593919 PGAM2P15259 253 aa11.13□□□□□ -0.63
VRK3-205ENST00000593919 TNFSF4P23510 183 aa11.13□□□□□ -0.63
VRK3-205ENST00000593919 GATA4P43694 442 aa11.13□□□□□ -0.63
VRK3-205ENST00000593919 ATXN7L3Q14CW9 347 aaPredicted RBP11.13□□□□□ -0.63
VRK3-205ENST00000593919 TMEM128Q5BJH2 165 aa11.13□□□□□ -0.63
VRK3-205ENST00000593919 AADACL3Q5VUY0 350 aa11.13□□□□□ -0.63
VRK3-205ENST00000593919 C11orf87Q6NUJ2 197 aa11.13□□□□□ -0.63
VRK3-205ENST00000593919 ALKAL2Q6UX46 152 aa11.13□□□□□ -0.63
VRK3-205ENST00000593919 LHFPL1Q86WI0 220 aa11.13□□□□□ -0.63
VRK3-205ENST00000593919 THNSL2Q86YJ6 484 aa11.13□□□□□ -0.63
VRK3-205ENST00000593919 LRRC29Q8WV35 223 aa11.13□□□□□ -0.63
VRK3-205ENST00000593919 PPP1R1CQ8WVI7 109 aa11.13□□□□□ -0.63
VRK3-205ENST00000593919 RDH8Q9NYR8 311 aa11.13□□□□□ -0.63
VRK3-205ENST00000593919 AKAP6Q13023 2319 aa11.12□□□□□ -0.63
VRK3-205ENST00000593919 HSPB6O14558 160 aa11.12□□□□□ -0.63
VRK3-205ENST00000593919 ADH4P08319 380 aa11.12□□□□□ -0.63
VRK3-205ENST00000593919 RNF224P0DH78 156 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms