RNA–Protein interactions for RNA: ENST00000593829.5

LSM4-203, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM4, Length 1,908 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-203ENST00000593829 A0A0D9SG52 128 aa16.41■□□□□ 0.22
LSM4-203ENST00000593829 B4DSR2 109 aa16.41■□□□□ 0.22
LSM4-203ENST00000593829 TGFAP01135 160 aa16.41■□□□□ 0.22
LSM4-203ENST00000593829 LHBP01229 141 aa16.41■□□□□ 0.22
LSM4-203ENST00000593829 ZNF20P17024 532 aa16.41■□□□□ 0.22
LSM4-203ENST00000593829 CFHR2P36980 270 aa16.41■□□□□ 0.22
LSM4-203ENST00000593829 GCSAMQ8N6F7 178 aa16.41■□□□□ 0.22
LSM4-203ENST00000593829 LRRC29Q8WV35 223 aa16.41■□□□□ 0.22
LSM4-203ENST00000593829 FGGYQ96C11 551 aa16.41■□□□□ 0.22
LSM4-203ENST00000593829 TECTBQ96PL2 329 aa16.41■□□□□ 0.22
LSM4-203ENST00000593829 MFFQ9GZY8 342 aa16.41■□□□□ 0.22
LSM4-203ENST00000593829 OR51I2Q9H344 312 aa16.41■□□□□ 0.22
LSM4-203ENST00000593829 YAE1D1Q9NRH1 226 aa16.41■□□□□ 0.22
LSM4-203ENST00000593829 SLC7A11Q9UPY5 501 aa16.41■□□□□ 0.22
LSM4-203ENST00000593829 ABCA1O95477 2261 aa16.4■□□□□ 0.22
LSM4-203ENST00000593829 FAM157AC9JC47 383 aa16.4■□□□□ 0.22
LSM4-203ENST00000593829 PXT1Q8NFP0 134 aa16.4■□□□□ 0.22
LSM4-203ENST00000593829 GPR148Q8TDV2 347 aa16.4■□□□□ 0.22
LSM4-203ENST00000593829 ADAT3Q96EY9 351 aaPredicted RBP16.4■□□□□ 0.22
LSM4-203ENST00000593829 PATZ1Q9HBE1 687 aaKnown RBP16.4■□□□□ 0.22
LSM4-203ENST00000593829 RASL12Q9NYN1 266 aa16.4■□□□□ 0.22
LSM4-203ENST00000593829 ZNF107Q9UII5 783 aaPredicted RBP16.4■□□□□ 0.22
LSM4-203ENST00000593829 MTORP42345 2549 aa16.4■□□□□ 0.22
LSM4-203ENST00000593829 TMEM272A0A1B0GTI8 110 aa16.39■□□□□ 0.21
LSM4-203ENST00000593829 PQLC2LA1A4F0 135 aa16.39■□□□□ 0.21
LSM4-203ENST00000593829 LGALS8O00214 317 aa16.39■□□□□ 0.21
LSM4-203ENST00000593829 SIX6O95475 246 aa16.39■□□□□ 0.21
LSM4-203ENST00000593829 RLN1P04808 185 aa16.39■□□□□ 0.21
LSM4-203ENST00000593829 RAB3AP20336 220 aa16.39■□□□□ 0.21
LSM4-203ENST00000593829 HOXA4Q00056 320 aaPredicted RBP16.39■□□□□ 0.21
LSM4-203ENST00000593829 FGL1Q08830 312 aa16.39■□□□□ 0.21
LSM4-203ENST00000593829 ZNF345Q14585 488 aa16.39■□□□□ 0.21
LSM4-203ENST00000593829 UBE2V2Q15819 145 aa16.39■□□□□ 0.21
LSM4-203ENST00000593829 DCAF12L2Q5VW00 463 aa16.39■□□□□ 0.21
LSM4-203ENST00000593829 FAM166AQ6J272 317 aa16.39■□□□□ 0.21
LSM4-203ENST00000593829 DEFB108BQ8NET1 73 aa16.39■□□□□ 0.21
LSM4-203ENST00000593829 TNFAIP8L1Q8WVP5 186 aa16.39■□□□□ 0.21
LSM4-203ENST00000593829 MS4A7Q9GZW8 240 aaPredicted RBP16.39■□□□□ 0.21
LSM4-203ENST00000593829 TRAV8-7A0A075B6U6 113 aa16.39■□□□□ 0.21
LSM4-203ENST00000593829 POM121CA8CG34 1229 aa16.39■□□□□ 0.21
LSM4-203ENST00000593829 CEACAM18A8MTB9 384 aa16.39■□□□□ 0.21
LSM4-203ENST00000593829 C3orf80F5H4A9 247 aa16.39■□□□□ 0.21
LSM4-203ENST00000593829 DNASE2O00115 360 aaPredicted RBP16.39■□□□□ 0.21
LSM4-203ENST00000593829 CD80P33681 288 aa16.39■□□□□ 0.21
LSM4-203ENST00000593829 ACTBP60709 375 aa16.39■□□□□ 0.21
LSM4-203ENST00000593829 ACTG1P63261 375 aa16.39■□□□□ 0.21
LSM4-203ENST00000593829 LPCAT3Q6P1A2 487 aa16.39■□□□□ 0.21
LSM4-203ENST00000593829 ZNF573Q86YE8 665 aa16.39■□□□□ 0.21
LSM4-203ENST00000593829 GPX8Q8TED1 209 aa16.39■□□□□ 0.21
LSM4-203ENST00000593829 SLC25A21Q9BQT8 299 aaPredicted RBP16.39■□□□□ 0.21
LSM4-203ENST00000593829 TLN2Q9Y4G6 2542 aa16.38■□□□□ 0.21
LSM4-203ENST00000593829 TRAV14DV4A0A0A6YYC5 116 aa16.38■□□□□ 0.21
LSM4-203ENST00000593829 TRAV38-1A0A0B4J264 116 aa16.38■□□□□ 0.21
LSM4-203ENST00000593829 OOEPA6NGQ2 149 aa16.38■□□□□ 0.21
LSM4-203ENST00000593829 GTF2F2P13984 249 aa16.38■□□□□ 0.21
LSM4-203ENST00000593829 EGR1P18146 543 aa16.38■□□□□ 0.21
LSM4-203ENST00000593829 CPT2P23786 658 aa16.38■□□□□ 0.21
LSM4-203ENST00000593829 PRSS3P35030 304 aa16.38■□□□□ 0.21
LSM4-203ENST00000593829 CNN3Q15417 329 aaKnown RBP16.38■□□□□ 0.21
LSM4-203ENST00000593829 HAGHLQ6PII5 290 aaPredicted RBP16.38■□□□□ 0.21
LSM4-203ENST00000593829 TMEM229BQ8NBD8 167 aa16.38■□□□□ 0.21
LSM4-203ENST00000593829 TSEN15Q8WW01 171 aaKnown RBP16.38■□□□□ 0.21
LSM4-203ENST00000593829 ST8SIA2Q92186 375 aa16.38■□□□□ 0.21
LSM4-203ENST00000593829 PHYHIPLQ96FC7 376 aa16.38■□□□□ 0.21
LSM4-203ENST00000593829 MIOXQ9UGB7 285 aa16.38■□□□□ 0.21
LSM4-203ENST00000593829 DHDHQ9UQ10 334 aa16.38■□□□□ 0.21
LSM4-203ENST00000593829 FAM230AA0A1W2PPH8 454 aa16.37■□□□□ 0.21
LSM4-203ENST00000593829 SRRM5B3KS81 715 aa16.37■□□□□ 0.21
LSM4-203ENST00000593829 MSMBP08118 114 aa16.37■□□□□ 0.21
LSM4-203ENST00000593829 CD37P11049 281 aa16.37■□□□□ 0.21
LSM4-203ENST00000593829 SLC25A4P12235 298 aa16.37■□□□□ 0.21
LSM4-203ENST00000593829 HAAOP46952 286 aa16.37■□□□□ 0.21
LSM4-203ENST00000593829 SOX2P48431 317 aa16.37■□□□□ 0.21
LSM4-203ENST00000593829 FUT6P51993 359 aa16.37■□□□□ 0.21
LSM4-203ENST00000593829 STEAP1BQ6NZ63 245 aa16.37■□□□□ 0.21
LSM4-203ENST00000593829 TMEM17Q86X19 198 aa16.37■□□□□ 0.21
LSM4-203ENST00000593829 KCNRGQ8N5I3 272 aa16.37■□□□□ 0.21
LSM4-203ENST00000593829 CLRN3Q8NCR9 226 aa16.37■□□□□ 0.21
LSM4-203ENST00000593829 OR51S1Q8NGJ8 323 aa16.37■□□□□ 0.21
LSM4-203ENST00000593829 OR51F2Q8NH61 342 aa16.37■□□□□ 0.21
LSM4-203ENST00000593829 NPRL2Q8WTW4 380 aa16.37■□□□□ 0.21
LSM4-203ENST00000593829 AQP3Q92482 292 aa16.37■□□□□ 0.21
LSM4-203ENST00000593829 SCPEP1Q9HB40 452 aa16.37■□□□□ 0.21
LSM4-203ENST00000593829 LPAR2Q9HBW0 351 aa16.37■□□□□ 0.21
LSM4-203ENST00000593829 KCNS2Q9ULS6 477 aa16.37■□□□□ 0.21
LSM4-203ENST00000593829 F5H0A9 414 aaPredicted RBP16.37■□□□□ 0.21
LSM4-203ENST00000593829 SLC17A2O00624 439 aa16.37■□□□□ 0.21
LSM4-203ENST00000593829 RPS2P15880 293 aaKnown RBP16.37■□□□□ 0.21
LSM4-203ENST00000593829 TAS2R19P59542 299 aa16.37■□□□□ 0.21
LSM4-203ENST00000593829 FLI1Q01543 452 aaPredicted RBP16.37■□□□□ 0.21
LSM4-203ENST00000593829 PLA2G7Q13093 441 aa16.37■□□□□ 0.21
LSM4-203ENST00000593829 TEX36Q5VZQ5 186 aa16.37■□□□□ 0.21
LSM4-203ENST00000593829 OR4D10Q8NGI6 311 aa16.37■□□□□ 0.21
LSM4-203ENST00000593829 RHBDL1O75783 438 aa16.36■□□□□ 0.21
LSM4-203ENST00000593829 OR2F2O95006 317 aa16.36■□□□□ 0.21
LSM4-203ENST00000593829 RLN2P04090 185 aa16.36■□□□□ 0.21
LSM4-203ENST00000593829 WNT2P09544 360 aa16.36■□□□□ 0.21
LSM4-203ENST00000593829 MUC1P15941 1255 aaPredicted RBP16.36■□□□□ 0.21
LSM4-203ENST00000593829 OR2F1Q13607 317 aa16.36■□□□□ 0.21
LSM4-203ENST00000593829 MICBQ29980 383 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms