RNA–Protein interactions for RNA: ENST00000593597.1

USE1-203, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 2

Gene USE1, Length 587 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-203ENST00000593597 HCKP08631 526 aa8.38□□□□□ -1.07
USE1-203ENST00000593597 FAM106CPP0CH98 169 aa8.38□□□□□ -1.07
USE1-203ENST00000593597 DBTP11182 482 aaKnown RBP8.38□□□□□ -1.07
USE1-203ENST00000593597 FCGR1AP12314 374 aa8.38□□□□□ -1.07
USE1-203ENST00000593597 MNDAP41218 407 aa8.38□□□□□ -1.07
USE1-203ENST00000593597 REG1BP48304 166 aa8.38□□□□□ -1.07
USE1-203ENST00000593597 PAX5Q02548 391 aa8.38□□□□□ -1.07
USE1-203ENST00000593597 EBI3Q14213 229 aa8.38□□□□□ -1.07
USE1-203ENST00000593597 GALEQ14376 348 aa8.38□□□□□ -1.07
USE1-203ENST00000593597 HNF4GQ14541 408 aa8.38□□□□□ -1.07
USE1-203ENST00000593597 PAN3Q58A45 887 aaKnown RBP8.38□□□□□ -1.07
USE1-203ENST00000593597 C1orf146Q5VVC0 180 aa8.38□□□□□ -1.07
USE1-203ENST00000593597 XAF1Q6GPH4 301 aa8.38□□□□□ -1.07
USE1-203ENST00000593597 CCDC144NLQ6NUI1 221 aa8.38□□□□□ -1.07
USE1-203ENST00000593597 ASCL4Q6XD76 172 aa8.38□□□□□ -1.07
USE1-203ENST00000593597 KCTD20Q7Z5Y7 419 aa8.38□□□□□ -1.07
USE1-203ENST00000593597 STPG2Q8N412 459 aa8.38□□□□□ -1.07
USE1-203ENST00000593597 ACBD7Q8N6N7 88 aa8.38□□□□□ -1.07
USE1-203ENST00000593597 KLHL30-AS1Q8NEE0 82 aa8.38□□□□□ -1.07
USE1-203ENST00000593597 PXT1Q8NFP0 134 aa8.38□□□□□ -1.07
USE1-203ENST00000593597 UBALD1Q8TB05 177 aa8.38□□□□□ -1.07
USE1-203ENST00000593597 TRUB1Q8WWH5 349 aaKnown RBP8.38□□□□□ -1.07
USE1-203ENST00000593597 PYDC1Q8WXC3 89 aa8.38□□□□□ -1.07
USE1-203ENST00000593597 CREB3L1Q96BA8 519 aa8.38□□□□□ -1.07
USE1-203ENST00000593597 NCOR1P1Q9H4R4 102 aa8.38□□□□□ -1.07
USE1-203ENST00000593597 LYSTQ99698 3801 aa8.37□□□□□ -1.07
USE1-203ENST00000593597 DNAH1Q9P2D7 4330 aa8.37□□□□□ -1.07
USE1-203ENST00000593597 CSMD3Q7Z407 3707 aa8.37□□□□□ -1.07
USE1-203ENST00000593597 A0A1W2PP11 408 aa8.37□□□□□ -1.07
USE1-203ENST00000593597 SERPINE3A8MV23 424 aa8.37□□□□□ -1.07
USE1-203ENST00000593597 C15orf65H3BRN8 121 aa8.37□□□□□ -1.07
USE1-203ENST00000593597 HSD17B6O14756 317 aa8.37□□□□□ -1.07
USE1-203ENST00000593597 SLC31A2O15432 143 aa8.37□□□□□ -1.07
USE1-203ENST00000593597 RPLP1P05386 114 aaKnown RBP8.37□□□□□ -1.07
USE1-203ENST00000593597 LUMP51884 338 aaPredicted RBP8.37□□□□□ -1.07
USE1-203ENST00000593597 ARHGDIBP52566 201 aa8.37□□□□□ -1.07
USE1-203ENST00000593597 GTF2A1P52655 376 aaPredicted RBP8.37□□□□□ -1.07
USE1-203ENST00000593597 CFHR3Q02985 330 aa8.37□□□□□ -1.07
USE1-203ENST00000593597 CD69Q07108 199 aa8.37□□□□□ -1.07
USE1-203ENST00000593597 ZNF816Q0VGE8 651 aaPredicted RBP8.37□□□□□ -1.07
USE1-203ENST00000593597 IL13RA2Q14627 380 aa8.37□□□□□ -1.07
USE1-203ENST00000593597 DEFB136Q30KP8 78 aa8.37□□□□□ -1.07
USE1-203ENST00000593597 SYS1Q8N2H4 156 aa8.37□□□□□ -1.07
USE1-203ENST00000593597 Q8N9W7 124 aa8.37□□□□□ -1.07
USE1-203ENST00000593597 TMEM104Q8NE00 496 aa8.37□□□□□ -1.07
USE1-203ENST00000593597 CHPT1Q8WUD6 406 aa8.37□□□□□ -1.07
USE1-203ENST00000593597 ST6GALNAC6Q969X2 333 aa8.37□□□□□ -1.07
USE1-203ENST00000593597 ORAI1Q96D31 301 aa8.37□□□□□ -1.07
USE1-203ENST00000593597 EAF1Q96JC9 268 aaPredicted RBP8.37□□□□□ -1.07
USE1-203ENST00000593597 WWC2-AS2Q96NR7 200 aa8.37□□□□□ -1.07
USE1-203ENST00000593597 PLSCR3Q9NRY6 295 aa8.37□□□□□ -1.07
USE1-203ENST00000593597 IMPAD1Q9NX62 359 aa8.37□□□□□ -1.07
USE1-203ENST00000593597 TAS2R4Q9NYW5 299 aa8.37□□□□□ -1.07
USE1-203ENST00000593597 AMMECR1Q9Y4X0 333 aaPredicted RBP8.37□□□□□ -1.07
USE1-203ENST00000593597 IGHV1-3A0A0C4DH29 117 aa8.36□□□□□ -1.07
USE1-203ENST00000593597 ZNF736B4DX44 427 aaPredicted RBP8.36□□□□□ -1.07
USE1-203ENST00000593597 H3BUI4 141 aa8.36□□□□□ -1.07
USE1-203ENST00000593597 CLIC3O95833 236 aa8.36□□□□□ -1.07
USE1-203ENST00000593597 OCM2P0CE71 109 aa8.36□□□□□ -1.07
USE1-203ENST00000593597 OCMP0CE72 109 aaPredicted RBP8.36□□□□□ -1.07
USE1-203ENST00000593597 MYCNOSP40205 109 aa8.36□□□□□ -1.07
USE1-203ENST00000593597 GPR12P47775 334 aa8.36□□□□□ -1.07
USE1-203ENST00000593597 SOX2P48431 317 aa8.36□□□□□ -1.07
USE1-203ENST00000593597 RAB7AP51149 207 aa8.36□□□□□ -1.07
USE1-203ENST00000593597 MADCAM1Q13477 382 aa8.36□□□□□ -1.07
USE1-203ENST00000593597 HES1Q14469 280 aa8.36□□□□□ -1.07
USE1-203ENST00000593597 SLC35E3Q7Z769 313 aa8.36□□□□□ -1.07
USE1-203ENST00000593597 SERPINA12Q8IW75 414 aa8.36□□□□□ -1.07
USE1-203ENST00000593597 IZUMO1Q8IYV9 350 aa8.36□□□□□ -1.07
USE1-203ENST00000593597 OR8H3Q8N146 312 aa8.36□□□□□ -1.07
USE1-203ENST00000593597 SUMF2Q8NBJ7 301 aa8.36□□□□□ -1.07
USE1-203ENST00000593597 OR51D1Q8NGF3 324 aa8.36□□□□□ -1.07
USE1-203ENST00000593597 TNFAIP8L1Q8WVP5 186 aa8.36□□□□□ -1.07
USE1-203ENST00000593597 APH1BQ8WW43 257 aa8.36□□□□□ -1.07
USE1-203ENST00000593597 TFAP2CQ92754 450 aa8.36□□□□□ -1.07
USE1-203ENST00000593597 HSPB9Q9BQS6 159 aa8.36□□□□□ -1.07
USE1-203ENST00000593597 AMBNQ9NP70 447 aa8.36□□□□□ -1.07
USE1-203ENST00000593597 PCDHB16Q9NRJ7 776 aa8.36□□□□□ -1.07
USE1-203ENST00000593597 ERVK13-1Q9NX77 482 aa8.36□□□□□ -1.07
USE1-203ENST00000593597 LSM4Q9Y4Z0 139 aaKnown RBP8.36□□□□□ -1.07
USE1-203ENST00000593597 SIRT4Q9Y6E7 314 aaPredicted RBP8.36□□□□□ -1.07
USE1-203ENST00000593597 IGHV3-43A0A0B4J1X8 118 aa8.35□□□□□ -1.07
USE1-203ENST00000593597 MAGEA13PA6NCF6 341 aa8.35□□□□□ -1.07
USE1-203ENST00000593597 TMEM212A6NML5 194 aa8.35□□□□□ -1.07
USE1-203ENST00000593597 NUDT19A8MXV4 375 aa8.35□□□□□ -1.07
USE1-203ENST00000593597 CDRT1O95170 752 aa8.35□□□□□ -1.07
USE1-203ENST00000593597 LIMS3P0CW19 117 aa8.35□□□□□ -1.07
USE1-203ENST00000593597 LIMS4P0CW20 117 aa8.35□□□□□ -1.07
USE1-203ENST00000593597 IGHV3-43DP0DP04 118 aa8.35□□□□□ -1.07
USE1-203ENST00000593597 MEDAGQ5VYS4 303 aa8.35□□□□□ -1.07
USE1-203ENST00000593597 C5orf24Q7Z6I8 188 aa8.35□□□□□ -1.07
USE1-203ENST00000593597 ZNF695Q8IW36 515 aa8.35□□□□□ -1.07
USE1-203ENST00000593597 RNF152Q8N8N0 203 aa8.35□□□□□ -1.07
USE1-203ENST00000593597 OR52I1Q8NGK6 324 aa8.35□□□□□ -1.07
USE1-203ENST00000593597 OR5D14Q8NGL3 314 aa8.35□□□□□ -1.07
USE1-203ENST00000593597 OR13C5Q8NGS8 318 aa8.35□□□□□ -1.07
USE1-203ENST00000593597 OR5AK2Q8NH90 309 aa8.35□□□□□ -1.07
USE1-203ENST00000593597 PRR25Q96S07 402 aa8.35□□□□□ -1.07
USE1-203ENST00000593597 DPCDQ9BVM2 203 aaPredicted RBP8.35□□□□□ -1.07
USE1-203ENST00000593597 JAM3Q9BX67 310 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms