RNA–Protein interactions for RNA: ENST00000593582.5

TRIM28-203, Transcript of tripartite motif containing 28, humanhuman

TSL 3

Gene TRIM28, Length 533 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-203ENST00000593582 MND1Q9BWT6 205 aa12.29□□□□□ -0.44
TRIM28-203ENST00000593582 SCN3BQ9NY72 215 aa12.29□□□□□ -0.44
TRIM28-203ENST00000593582 CALYQ9NYX4 217 aa12.29□□□□□ -0.44
TRIM28-203ENST00000593582 FOXJ3Q9UPW0 622 aa12.29□□□□□ -0.44
TRIM28-203ENST00000593582 VWFP04275 2813 aa12.29□□□□□ -0.44
TRIM28-203ENST00000593582 MEGF11A6BM72 1044 aa12.28□□□□□ -0.44
TRIM28-203ENST00000593582 FAM90A22PA8MWA6 464 aa12.28□□□□□ -0.44
TRIM28-203ENST00000593582 BUB1B-PAK6H3BSN5 160 aa12.28□□□□□ -0.44
TRIM28-203ENST00000593582 IL1AP01583 271 aa12.28□□□□□ -0.44
TRIM28-203ENST00000593582 MAS1P04201 325 aa12.28□□□□□ -0.44
TRIM28-203ENST00000593582 CDK1P06493 297 aa12.28□□□□□ -0.44
TRIM28-203ENST00000593582 CGB3P0DN86 165 aa12.28□□□□□ -0.44
TRIM28-203ENST00000593582 CGB7P0DN87 165 aa12.28□□□□□ -0.44
TRIM28-203ENST00000593582 VSIG10L2P0DP72 767 aa12.28□□□□□ -0.44
TRIM28-203ENST00000593582 RBM39Q14498 530 aaKnown RBP12.28□□□□□ -0.44
TRIM28-203ENST00000593582 HERPUD1Q15011 391 aa12.28□□□□□ -0.44
TRIM28-203ENST00000593582 MPV17LQ2QL34 196 aa12.28□□□□□ -0.44
TRIM28-203ENST00000593582 HLA-DRB5Q30154 266 aa12.28□□□□□ -0.44
TRIM28-203ENST00000593582 RNLSQ5VYX0 342 aa12.28□□□□□ -0.44
TRIM28-203ENST00000593582 CDH26Q8IXH8 852 aa12.28□□□□□ -0.44
TRIM28-203ENST00000593582 KLHDC1Q8N7A1 406 aa12.28□□□□□ -0.44
TRIM28-203ENST00000593582 PLPPR1Q8TBJ4 325 aa12.28□□□□□ -0.44
TRIM28-203ENST00000593582 MRGPRDQ8TDS7 321 aa12.28□□□□□ -0.44
TRIM28-203ENST00000593582 MUL1Q969V5 352 aa12.28□□□□□ -0.44
TRIM28-203ENST00000593582 MRPS24Q96EL2 167 aaKnown RBP12.28□□□□□ -0.44
TRIM28-203ENST00000593582 KIRREL1Q96J84 757 aa12.28□□□□□ -0.44
TRIM28-203ENST00000593582 PRSS22Q9GZN4 317 aa12.28□□□□□ -0.44
TRIM28-203ENST00000593582 LINC00574Q9H8X3 128 aa12.28□□□□□ -0.44
TRIM28-203ENST00000593582 ZNF702PQ9H963 129 aa12.28□□□□□ -0.44
TRIM28-203ENST00000593582 IDI2-AS1Q9NZ38 188 aa12.28□□□□□ -0.44
TRIM28-203ENST00000593582 ZNF581Q9P0T4 197 aa12.28□□□□□ -0.44
TRIM28-203ENST00000593582 MRPS28Q9Y2Q9 187 aaKnown RBP12.28□□□□□ -0.44
TRIM28-203ENST00000593582 PEX14O75381 377 aa12.27□□□□□ -0.45
TRIM28-203ENST00000593582 AQP4P55087 323 aa12.27□□□□□ -0.45
TRIM28-203ENST00000593582 ARSJQ5FYB0 599 aaPredicted RBP12.27□□□□□ -0.45
TRIM28-203ENST00000593582 ATAD3CQ5T2N8 411 aa12.27□□□□□ -0.45
TRIM28-203ENST00000593582 AWAT2Q6E213 333 aa12.27□□□□□ -0.45
TRIM28-203ENST00000593582 CCDC144NLQ6NUI1 221 aa12.27□□□□□ -0.45
TRIM28-203ENST00000593582 GLIPR1L1Q6UWM5 242 aa12.27□□□□□ -0.45
TRIM28-203ENST00000593582 Q8N2B8 174 aa12.27□□□□□ -0.45
TRIM28-203ENST00000593582 NKAIN3Q8N8D7 197 aa12.27□□□□□ -0.45
TRIM28-203ENST00000593582 OR9G1Q8NH87 305 aa12.27□□□□□ -0.45
TRIM28-203ENST00000593582 NEK7Q8TDX7 302 aa12.27□□□□□ -0.45
TRIM28-203ENST00000593582 NRG4Q8WWG1 115 aa12.27□□□□□ -0.45
TRIM28-203ENST00000593582 AKR1E2Q96JD6 320 aa12.27□□□□□ -0.45
TRIM28-203ENST00000593582 MMP28Q9H239 520 aa12.27□□□□□ -0.45
TRIM28-203ENST00000593582 SPACA1Q9HBV2 294 aa12.27□□□□□ -0.45
TRIM28-203ENST00000593582 AMMECR1Q9Y4X0 333 aaPredicted RBP12.27□□□□□ -0.45
TRIM28-203ENST00000593582 KIAA2026Q5HYC2 2103 aa12.26□□□□□ -0.45
TRIM28-203ENST00000593582 CMYA5Q8N3K9 4069 aa12.26□□□□□ -0.45
TRIM28-203ENST00000593582 A0A1W2PP11 408 aa12.26□□□□□ -0.45
TRIM28-203ENST00000593582 TMEM30CPA0ZSE6 113 aa12.26□□□□□ -0.45
TRIM28-203ENST00000593582 OOSP1A8MZH6 123 aa12.26□□□□□ -0.45
TRIM28-203ENST00000593582 GZMHP20718 246 aa12.26□□□□□ -0.45
TRIM28-203ENST00000593582 SSTR5P35346 364 aa12.26□□□□□ -0.45
TRIM28-203ENST00000593582 MNDAP41218 407 aa12.26□□□□□ -0.45
TRIM28-203ENST00000593582 HABP2Q14520 560 aaPredicted RBP12.26□□□□□ -0.45
TRIM28-203ENST00000593582 TPTE2P1Q5T6R2 138 aa12.26□□□□□ -0.45
TRIM28-203ENST00000593582 MS4A15Q8N5U1 240 aa12.26□□□□□ -0.45
TRIM28-203ENST00000593582 OR10A7Q8NGE5 316 aa12.26□□□□□ -0.45
TRIM28-203ENST00000593582 RFESDQ8TAC1 157 aa12.26□□□□□ -0.45
TRIM28-203ENST00000593582 CAPSLQ8WWF8 208 aa12.26□□□□□ -0.45
TRIM28-203ENST00000593582 VCX3BQ9H321 246 aa12.26□□□□□ -0.45
TRIM28-203ENST00000593582 NPIPB11E5RHQ5 1161 aa12.25□□□□□ -0.45
TRIM28-203ENST00000593582 LY6LH3BQJ8 138 aa12.25□□□□□ -0.45
TRIM28-203ENST00000593582 J3QR06 171 aa12.25□□□□□ -0.45
TRIM28-203ENST00000593582 PIN1P1O15428 100 aa12.25□□□□□ -0.45
TRIM28-203ENST00000593582 TSPAN15O95858 294 aa12.25□□□□□ -0.45
TRIM28-203ENST00000593582 CSF1P09603 554 aa12.25□□□□□ -0.45
TRIM28-203ENST00000593582 CD24P25063 80 aa12.25□□□□□ -0.45
TRIM28-203ENST00000593582 BLCAPP62952 87 aa12.25□□□□□ -0.45
TRIM28-203ENST00000593582 GABPB1Q06547 395 aaPredicted RBP12.25□□□□□ -0.45
TRIM28-203ENST00000593582 SPHARQ15513 63 aa12.25□□□□□ -0.45
TRIM28-203ENST00000593582 MED22Q15528 200 aa12.25□□□□□ -0.45
TRIM28-203ENST00000593582 LTC4SQ16873 150 aa12.25□□□□□ -0.45
TRIM28-203ENST00000593582 UTF1Q5T230 341 aa12.25□□□□□ -0.45
TRIM28-203ENST00000593582 SLC16A12Q6ZSM3 486 aa12.25□□□□□ -0.45
TRIM28-203ENST00000593582 C16orf82Q7Z2V1 217 aa12.25□□□□□ -0.45
TRIM28-203ENST00000593582 C11orf44Q8N8P7 122 aa12.25□□□□□ -0.45
TRIM28-203ENST00000593582 CFHR4Q92496 578 aa12.25□□□□□ -0.45
TRIM28-203ENST00000593582 RPEQ96AT9 228 aa12.25□□□□□ -0.45
TRIM28-203ENST00000593582 UQCC2Q9BRT2 126 aa12.25□□□□□ -0.45
TRIM28-203ENST00000593582 LIN7BQ9HAP6 207 aa12.25□□□□□ -0.45
TRIM28-203ENST00000593582 SERTAD4Q9NUC0 356 aa12.25□□□□□ -0.45
TRIM28-203ENST00000593582 TPRKBQ9Y3C4 175 aa12.25□□□□□ -0.45
TRIM28-203ENST00000593582 TRAV39A0A0B4J263 110 aa12.24□□□□□ -0.45
TRIM28-203ENST00000593582 MCRIP1C9JLW8 97 aa12.24□□□□□ -0.45
TRIM28-203ENST00000593582 H0YHG0 523 aa12.24□□□□□ -0.45
TRIM28-203ENST00000593582 CRTAPO75718 401 aaPredicted RBP12.24□□□□□ -0.45
TRIM28-203ENST00000593582 IGHV3-7P01780 117 aa12.24□□□□□ -0.45
TRIM28-203ENST00000593582 MYF6P23409 242 aa12.24□□□□□ -0.45
TRIM28-203ENST00000593582 SLC35A2P78381 396 aa12.24□□□□□ -0.45
TRIM28-203ENST00000593582 MADCAM1Q13477 382 aa12.24□□□□□ -0.45
TRIM28-203ENST00000593582 ACSM3Q53FZ2 586 aa12.24□□□□□ -0.45
TRIM28-203ENST00000593582 OR10X1Q8NGY0 326 aa12.24□□□□□ -0.45
TRIM28-203ENST00000593582 FAM110DQ8TAY7 271 aaPredicted RBP12.24□□□□□ -0.45
TRIM28-203ENST00000593582 LEAP2Q969E1 77 aa12.24□□□□□ -0.45
TRIM28-203ENST00000593582 TOMM40LQ969M1 308 aa12.24□□□□□ -0.45
TRIM28-203ENST00000593582 OR5M11Q96RB7 305 aa12.24□□□□□ -0.45
TRIM28-203ENST00000593582 TMED9Q9BVK6 235 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms