RNA–Protein interactions for RNA: ENST00000593168.5

VMP1-217, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-217ENST00000593168 ANXA10Q9UJ72 324 aa11.26□□□□□ -0.61
VMP1-217ENST00000593168 NUBP2Q9Y5Y2 271 aa11.26□□□□□ -0.61
VMP1-217ENST00000593168 JMJD1CQ15652 2540 aa11.25□□□□□ -0.61
VMP1-217ENST00000593168 IGKV1D-8A0A087WSZ0 117 aa11.25□□□□□ -0.61
VMP1-217ENST00000593168 TRAV38-1A0A0B4J264 116 aa11.25□□□□□ -0.61
VMP1-217ENST00000593168 IGHV1-69-2A0A0G2JMI3 117 aa11.25□□□□□ -0.61
VMP1-217ENST00000593168 M0QYG6 137 aa11.25□□□□□ -0.61
VMP1-217ENST00000593168 HSPB6O14558 160 aa11.25□□□□□ -0.61
VMP1-217ENST00000593168 ZNF737O75373 536 aa11.25□□□□□ -0.61
VMP1-217ENST00000593168 AMY2AP04746 511 aa11.25□□□□□ -0.61
VMP1-217ENST00000593168 IFNA6P05013 189 aa11.25□□□□□ -0.61
VMP1-217ENST00000593168 CD80P33681 288 aa11.25□□□□□ -0.61
VMP1-217ENST00000593168 HRH1P35367 487 aa11.25□□□□□ -0.61
VMP1-217ENST00000593168 OR3A3P47888 321 aa11.25□□□□□ -0.61
VMP1-217ENST00000593168 CEBPDP49716 269 aaPredicted RBP11.25□□□□□ -0.61
VMP1-217ENST00000593168 CCR6P51684 374 aa11.25□□□□□ -0.61
VMP1-217ENST00000593168 PAX5Q02548 391 aa11.25□□□□□ -0.61
VMP1-217ENST00000593168 COL10A1Q03692 680 aa11.25□□□□□ -0.61
VMP1-217ENST00000593168 GRK1Q15835 563 aa11.25□□□□□ -0.61
VMP1-217ENST00000593168 CHRFAM7AQ494W8 412 aa11.25□□□□□ -0.61
VMP1-217ENST00000593168 ATPAF1Q5TC12 328 aaPredicted RBP11.25□□□□□ -0.61
VMP1-217ENST00000593168 STUMQ69YW2 141 aa11.25□□□□□ -0.61
VMP1-217ENST00000593168 SLC35E4Q6ICL7 350 aa11.25□□□□□ -0.61
VMP1-217ENST00000593168 FAAP20Q6NZ36 180 aa11.25□□□□□ -0.61
VMP1-217ENST00000593168 ZNF880Q6PDB4 577 aa11.25□□□□□ -0.61
VMP1-217ENST00000593168 ZNF497Q6ZNH5 498 aa11.25□□□□□ -0.61
VMP1-217ENST00000593168 BTN2A1Q7KYR7 527 aa11.25□□□□□ -0.61
VMP1-217ENST00000593168 CIARTQ8N365 385 aaPredicted RBP11.25□□□□□ -0.61
VMP1-217ENST00000593168 ARRDC1Q8N5I2 433 aa11.25□□□□□ -0.61
VMP1-217ENST00000593168 OR5T2Q8NGG2 359 aa11.25□□□□□ -0.61
VMP1-217ENST00000593168 OR51S1Q8NGJ8 323 aa11.25□□□□□ -0.61
VMP1-217ENST00000593168 OR5H2Q8NGV7 314 aa11.25□□□□□ -0.61
VMP1-217ENST00000593168 OR56B4Q8NH76 319 aa11.25□□□□□ -0.61
VMP1-217ENST00000593168 MRPL30Q8TCC3 161 aaKnown RBP11.25□□□□□ -0.61
VMP1-217ENST00000593168 CCL17Q92583 94 aa11.25□□□□□ -0.61
VMP1-217ENST00000593168 SDSLQ96GA7 329 aa11.25□□□□□ -0.61
VMP1-217ENST00000593168 SNX22Q96L94 193 aa11.25□□□□□ -0.61
VMP1-217ENST00000593168 PRRT1Q99946 306 aa11.25□□□□□ -0.61
VMP1-217ENST00000593168 CHMP1AQ9HD42 196 aaPredicted RBP11.25□□□□□ -0.61
VMP1-217ENST00000593168 SCP2D1Q9UJQ7 156 aa11.25□□□□□ -0.61
VMP1-217ENST00000593168 PPIAL4EA0A075B759 164 aa11.24□□□□□ -0.61
VMP1-217ENST00000593168 IGHV3OR15-7A0A075B7D8 119 aa11.24□□□□□ -0.61
VMP1-217ENST00000593168 PPIAL4DF5H284 164 aa11.24□□□□□ -0.61
VMP1-217ENST00000593168 NDUFB6O95139 128 aa11.24□□□□□ -0.61
VMP1-217ENST00000593168 FSTL3O95633 263 aa11.24□□□□□ -0.61
VMP1-217ENST00000593168 PMP2P02689 132 aa11.24□□□□□ -0.61
VMP1-217ENST00000593168 CSN2P05814 226 aa11.24□□□□□ -0.61
VMP1-217ENST00000593168 PPIAL4FP0DN26 164 aa11.24□□□□□ -0.61
VMP1-217ENST00000593168 GABRA2P47869 451 aa11.24□□□□□ -0.61
VMP1-217ENST00000593168 OR3A1P47881 315 aa11.24□□□□□ -0.61
VMP1-217ENST00000593168 RAG2P55895 527 aa11.24□□□□□ -0.61
VMP1-217ENST00000593168 BTG1P62324 171 aa11.24□□□□□ -0.61
VMP1-217ENST00000593168 MRPS11P82912 194 aaKnown RBP11.24□□□□□ -0.61
VMP1-217ENST00000593168 HFEQ30201 348 aa11.24□□□□□ -0.61
VMP1-217ENST00000593168 FAM201AQ5SY85 155 aa11.24□□□□□ -0.61
VMP1-217ENST00000593168 Q6ZPA2 131 aa11.24□□□□□ -0.61
VMP1-217ENST00000593168 ZNF788Q6ZQV5 615 aa11.24□□□□□ -0.61
VMP1-217ENST00000593168 C17orf107Q6ZR85 190 aa11.24□□□□□ -0.61
VMP1-217ENST00000593168 OVCH2Q7RTZ1 564 aa11.24□□□□□ -0.61
VMP1-217ENST00000593168 GLCCI1Q86VQ1 547 aa11.24□□□□□ -0.61
VMP1-217ENST00000593168 ZNF561Q8N587 486 aa11.24□□□□□ -0.61
VMP1-217ENST00000593168 PLPPR1Q8TBJ4 325 aa11.24□□□□□ -0.61
VMP1-217ENST00000593168 MAFIPQ8WZ33 124 aa11.24□□□□□ -0.61
VMP1-217ENST00000593168 SLC6A7Q99884 636 aa11.24□□□□□ -0.61
VMP1-217ENST00000593168 SHARPINQ9H0F6 387 aa11.24□□□□□ -0.61
VMP1-217ENST00000593168 DNTTIP1Q9H147 329 aa11.24□□□□□ -0.61
VMP1-217ENST00000593168 PPA2Q9H2U2 334 aa11.24□□□□□ -0.61
VMP1-217ENST00000593168 UBTD1Q9HAC8 227 aa11.24□□□□□ -0.61
VMP1-217ENST00000593168 BEX4Q9NWD9 120 aaPredicted RBP11.24□□□□□ -0.61
VMP1-217ENST00000593168 DCAF16Q9NXF7 216 aa11.24□□□□□ -0.61
VMP1-217ENST00000593168 MGAT4AQ9UM21 535 aa11.24□□□□□ -0.61
VMP1-217ENST00000593168 LAMP3Q9UQV4 416 aa11.24□□□□□ -0.61
VMP1-217ENST00000593168 PPIAL4AQ9Y536 164 aa11.24□□□□□ -0.61
VMP1-217ENST00000593168 MAB21L2Q9Y586 359 aa11.24□□□□□ -0.61
VMP1-217ENST00000593168 RAI1Q7Z5J4 1906 aaPredicted RBP11.24□□□□□ -0.61
VMP1-217ENST00000593168 TANC2Q9HCD6 1990 aa11.24□□□□□ -0.61
VMP1-217ENST00000593168 FBN1P35555 2871 aaKnown RBP11.23□□□□□ -0.61
VMP1-217ENST00000593168 KIR2DS1A0A191URI9 304 aa11.23□□□□□ -0.61
VMP1-217ENST00000593168 TMEM30CPA0ZSE6 113 aa11.23□□□□□ -0.61
VMP1-217ENST00000593168 TRDCB7Z8K6 153 aa11.23□□□□□ -0.61
VMP1-217ENST00000593168 INMT-MINDY4F8WBC2 141 aa11.23□□□□□ -0.61
VMP1-217ENST00000593168 K7N7A8 449 aa11.23□□□□□ -0.61
VMP1-217ENST00000593168 MGST3O14880 152 aa11.23□□□□□ -0.61
VMP1-217ENST00000593168 RBMXP38159 391 aaKnown RBP11.23□□□□□ -0.61
VMP1-217ENST00000593168 KIR2DS4P43632 304 aa11.23□□□□□ -0.61
VMP1-217ENST00000593168 ARPC4P59998 168 aa11.23□□□□□ -0.61
VMP1-217ENST00000593168 KIR2DS1Q14954 304 aa11.23□□□□□ -0.61
VMP1-217ENST00000593168 CDK10Q15131 360 aa11.23□□□□□ -0.61
VMP1-217ENST00000593168 RBMS2Q15434 407 aaKnown RBP11.23□□□□□ -0.61
VMP1-217ENST00000593168 RSBN1Q5VWQ0 802 aaPredicted RBP11.23□□□□□ -0.61
VMP1-217ENST00000593168 MOB1BQ7L9L4 216 aa11.23□□□□□ -0.61
VMP1-217ENST00000593168 TMEM17Q86X19 198 aa11.23□□□□□ -0.61
VMP1-217ENST00000593168 OR5D13Q8NGL4 314 aa11.23□□□□□ -0.61
VMP1-217ENST00000593168 UPRTQ96BW1 309 aa11.23□□□□□ -0.61
VMP1-217ENST00000593168 SLC25A21Q9BQT8 299 aaPredicted RBP11.23□□□□□ -0.61
VMP1-217ENST00000593168 FAM234AQ9H0X4 552 aa11.23□□□□□ -0.61
VMP1-217ENST00000593168 NCOR1P1Q9H4R4 102 aa11.23□□□□□ -0.61
VMP1-217ENST00000593168 ZNF665Q9H7R5 613 aa11.23□□□□□ -0.61
VMP1-217ENST00000593168 MBNL3Q9NUK0 354 aaKnown RBP11.23□□□□□ -0.61
VMP1-217ENST00000593168 METRNQ9UJH8 293 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 127 ms