RNA–Protein interactions for RNA: ENST00000592705.5

DNMT1-228, Transcript of DNA methyltransferase 1, humanhuman

TSL 1 (best)

Gene DNMT1, Length 5,215 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-228ENST00000592705 TPPP3Q9BW30 176 aa11.13□□□□□ -0.63
DNMT1-228ENST00000592705 LPAR2Q9HBW0 351 aa11.13□□□□□ -0.63
DNMT1-228ENST00000592705 SLC2A9Q9NRM0 540 aa11.13□□□□□ -0.63
DNMT1-228ENST00000592705 TRAPPC1Q9Y5R8 145 aa11.13□□□□□ -0.63
DNMT1-228ENST00000592705 A0A1W2PR77 199 aa11.12□□□□□ -0.63
DNMT1-228ENST00000592705 MED19A0JLT2 244 aaPredicted RBP11.12□□□□□ -0.63
DNMT1-228ENST00000592705 PPYP01298 95 aa11.12□□□□□ -0.63
DNMT1-228ENST00000592705 PRRX1P54821 245 aa11.12□□□□□ -0.63
DNMT1-228ENST00000592705 SSTP61278 116 aa11.12□□□□□ -0.63
DNMT1-228ENST00000592705 P2RY6Q15077 328 aa11.12□□□□□ -0.63
DNMT1-228ENST00000592705 MARVELD3Q96A59 401 aa11.12□□□□□ -0.63
DNMT1-228ENST00000592705 POM121L2Q96KW2 1035 aa11.12□□□□□ -0.63
DNMT1-228ENST00000592705 FAM103A1Q9BTL3 118 aaKnown RBP11.12□□□□□ -0.63
DNMT1-228ENST00000592705 MFSD2BA6NFX1 497 aa11.12□□□□□ -0.63
DNMT1-228ENST00000592705 PIN1P1O15428 100 aa11.12□□□□□ -0.63
DNMT1-228ENST00000592705 MPGP29372 298 aa11.12□□□□□ -0.63
DNMT1-228ENST00000592705 LTBP1Q14766 1721 aa11.12□□□□□ -0.63
DNMT1-228ENST00000592705 M0R1X1 148 aa11.12□□□□□ -0.63
DNMT1-228ENST00000592705 ISG15P05161 165 aa11.12□□□□□ -0.63
DNMT1-228ENST00000592705 COX7A1P24310 79 aa11.12□□□□□ -0.63
DNMT1-228ENST00000592705 ZNF660Q6AZW8 331 aaPredicted RBP11.12□□□□□ -0.63
DNMT1-228ENST00000592705 PIMREGQ9BSJ6 248 aa11.12□□□□□ -0.63
DNMT1-228ENST00000592705 LIPGQ9Y5X9 500 aa11.12□□□□□ -0.63
DNMT1-228ENST00000592705 A0A1W2PQM1 296 aa11.12□□□□□ -0.63
DNMT1-228ENST00000592705 C7orf77A4D0Y5 90 aa11.12□□□□□ -0.63
DNMT1-228ENST00000592705 TUSC5Q8IXB3 177 aa11.12□□□□□ -0.63
DNMT1-228ENST00000592705 TMEM147Q9BVK8 224 aa11.12□□□□□ -0.63
DNMT1-228ENST00000592705 CTDSP1Q9GZU7 261 aa11.12□□□□□ -0.63
DNMT1-228ENST00000592705 GAL3ST2Q9H3Q3 398 aa11.12□□□□□ -0.63
DNMT1-228ENST00000592705 TRAV20A0A0B4J274 112 aa11.12□□□□□ -0.63
DNMT1-228ENST00000592705 hADV38S2A0JD32 116 aa11.12□□□□□ -0.63
DNMT1-228ENST00000592705 B4DEV8 164 aa11.12□□□□□ -0.63
DNMT1-228ENST00000592705 OPN1MWP04001 364 aa11.12□□□□□ -0.63
DNMT1-228ENST00000592705 OPN1MW2P0DN77 364 aa11.12□□□□□ -0.63
DNMT1-228ENST00000592705 OPN1MW3P0DN78 364 aa11.12□□□□□ -0.63
DNMT1-228ENST00000592705 C1orf100Q5SVJ3 147 aa11.12□□□□□ -0.63
DNMT1-228ENST00000592705 GPR27Q9NS67 375 aa11.12□□□□□ -0.63
DNMT1-228ENST00000592705 ELOA3CA0A087WX78 387 aaPredicted RBP11.11□□□□□ -0.63
DNMT1-228ENST00000592705 SEC14L6B5MCN3 397 aa11.11□□□□□ -0.63
DNMT1-228ENST00000592705 KLF4O43474 513 aa11.11□□□□□ -0.63
DNMT1-228ENST00000592705 DNPH1O43598 174 aa11.11□□□□□ -0.63
DNMT1-228ENST00000592705 TSPAN2O60636 221 aa11.11□□□□□ -0.63
DNMT1-228ENST00000592705 GOSR1O95249 250 aa11.11□□□□□ -0.63
DNMT1-228ENST00000592705 NTF3P20783 257 aa11.11□□□□□ -0.63
DNMT1-228ENST00000592705 ZNF260Q3ZCT1 412 aa11.11□□□□□ -0.63
DNMT1-228ENST00000592705 SMUG1Q53HV7 270 aa11.11□□□□□ -0.63
DNMT1-228ENST00000592705 CTHRC1Q96CG8 243 aa11.11□□□□□ -0.63
DNMT1-228ENST00000592705 CHEK1O14757 476 aa11.11□□□□□ -0.63
DNMT1-228ENST00000592705 SYNGR2O43760 224 aa11.11□□□□□ -0.63
DNMT1-228ENST00000592705 CTRB1P17538 263 aa11.11□□□□□ -0.63
DNMT1-228ENST00000592705 EWSR1Q01844 656 aaKnown RBP eCLIP11.11□□□□□ -0.63
DNMT1-228ENST00000592705 CTRB2Q6GPI1 263 aa11.11□□□□□ -0.63
DNMT1-228ENST00000592705 UBAC2Q8NBM4 344 aa11.11□□□□□ -0.63
DNMT1-228ENST00000592705 UBALD1Q8TB05 177 aa11.11□□□□□ -0.63
DNMT1-228ENST00000592705 DIRC2Q96SL1 478 aa11.11□□□□□ -0.63
DNMT1-228ENST00000592705 OR2H1Q9GZK4 316 aa11.11□□□□□ -0.63
DNMT1-228ENST00000592705 KCNK7Q9Y2U2 307 aa11.11□□□□□ -0.63
DNMT1-228ENST00000592705 SMIM6P0DI80 62 aa11.11□□□□□ -0.63
DNMT1-228ENST00000592705 CNN1P51911 297 aaKnown RBP11.11□□□□□ -0.63
DNMT1-228ENST00000592705 SUMO1P63165 101 aaKnown RBP11.11□□□□□ -0.63
DNMT1-228ENST00000592705 IQCJQ1A5X6 159 aa11.11□□□□□ -0.63
DNMT1-228ENST00000592705 OR11H4Q8NGC9 324 aa11.11□□□□□ -0.63
DNMT1-228ENST00000592705 NPDC1Q9NQX5 325 aaPredicted RBP11.11□□□□□ -0.63
DNMT1-228ENST00000592705 IGLV1-36A0A0B4J1U3 117 aa11.11□□□□□ -0.63
DNMT1-228ENST00000592705 DVL1O14640 695 aa11.11□□□□□ -0.63
DNMT1-228ENST00000592705 SMAD7O15105 426 aaKnown RBP11.11□□□□□ -0.63
DNMT1-228ENST00000592705 COX7A2P2O60397 106 aa11.11□□□□□ -0.63
DNMT1-228ENST00000592705 CT45A10P0DMU9 189 aa11.11□□□□□ -0.63
DNMT1-228ENST00000592705 CSN1S1P47710 185 aa11.11□□□□□ -0.63
DNMT1-228ENST00000592705 ERVFC1-1P60608 527 aa11.11□□□□□ -0.63
DNMT1-228ENST00000592705 MPV17LQ2QL34 196 aa11.11□□□□□ -0.63
DNMT1-228ENST00000592705 ZNF658BQ4V348 819 aaPredicted RBP11.11□□□□□ -0.63
DNMT1-228ENST00000592705 SPACA3Q8IXA5 215 aa11.11□□□□□ -0.63
DNMT1-228ENST00000592705 OR10G4Q8NGN3 311 aa11.11□□□□□ -0.63
DNMT1-228ENST00000592705 OR10G9Q8NGN4 311 aa11.11□□□□□ -0.63
DNMT1-228ENST00000592705 OR10G7Q8NGN6 311 aa11.11□□□□□ -0.63
DNMT1-228ENST00000592705 OR2D2Q9H210 308 aa11.11□□□□□ -0.63
DNMT1-228ENST00000592705 CLN8Q9UBY8 286 aa11.11□□□□□ -0.63
DNMT1-228ENST00000592705 CHST1O43916 411 aa11.1□□□□□ -0.63
DNMT1-228ENST00000592705 KIR2DS2P43631 304 aa11.1□□□□□ -0.63
DNMT1-228ENST00000592705 LYZL2Q7Z4W2 148 aa11.1□□□□□ -0.63
DNMT1-228ENST00000592705 CXorf67Q86X51 503 aaPredicted RBP11.1□□□□□ -0.63
DNMT1-228ENST00000592705 GAPTQ8N292 157 aa11.1□□□□□ -0.63
DNMT1-228ENST00000592705 AMELYQ99218 206 aa11.1□□□□□ -0.63
DNMT1-228ENST00000592705 NAT8Q9UHE5 227 aa11.1□□□□□ -0.63
DNMT1-228ENST00000592705 TEX30Q5JUR7 227 aa11.1□□□□□ -0.63
DNMT1-228ENST00000592705 INO80CQ6PI98 192 aaPredicted RBP11.1□□□□□ -0.63
DNMT1-228ENST00000592705 TMEM251Q8N6I4 163 aa11.1□□□□□ -0.63
DNMT1-228ENST00000592705 OR5D13Q8NGL4 314 aa11.1□□□□□ -0.63
DNMT1-228ENST00000592705 TMEM37Q8WXS4 190 aa11.1□□□□□ -0.63
DNMT1-228ENST00000592705 TMEM38BQ9NVV0 291 aa11.1□□□□□ -0.63
DNMT1-228ENST00000592705 FOXJ2Q9P0K8 574 aa11.1□□□□□ -0.63
DNMT1-228ENST00000592705 A0A0U1RQV5 110 aa11.1□□□□□ -0.63
DNMT1-228ENST00000592705 LOC101059948A0A1B0GTJ6 334 aa11.1□□□□□ -0.63
DNMT1-228ENST00000592705 ARG1P05089 322 aa11.1□□□□□ -0.63
DNMT1-228ENST00000592705 CCL2P13500 99 aa11.1□□□□□ -0.63
DNMT1-228ENST00000592705 PAX6P26367 422 aa11.1□□□□□ -0.63
DNMT1-228ENST00000592705 CDC34P49427 236 aaPredicted RBP11.1□□□□□ -0.63
DNMT1-228ENST00000592705 SULT1A1P50225 295 aa11.1□□□□□ -0.63
DNMT1-228ENST00000592705 PLPPR5Q32ZL2 321 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms