RNA–Protein interactions for RNA: ENST00000592012.5

MBD3-209, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 5

Gene MBD3, Length 2,379 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-209ENST00000592012 MPV17P39210 176 aa16.73■□□□□ 0.27
MBD3-209ENST00000592012 SPIN3Q5JUX0 258 aa16.73■□□□□ 0.27
MBD3-209ENST00000592012 Q8IYB0 196 aa16.73■□□□□ 0.27
MBD3-209ENST00000592012 SLC35G3Q8N808 338 aa16.73■□□□□ 0.27
MBD3-209ENST00000592012 ZNF565Q8N9K5 539 aa16.73■□□□□ 0.27
MBD3-209ENST00000592012 OR52M1Q8NGK5 317 aa16.73■□□□□ 0.27
MBD3-209ENST00000592012 FBXO9Q9UK97 447 aaPredicted RBP16.73■□□□□ 0.27
MBD3-209ENST00000592012 PCDHB10Q9UN67 800 aa16.73■□□□□ 0.27
MBD3-209ENST00000592012 SELEP16581 610 aa16.73■□□□□ 0.27
MBD3-209ENST00000592012 FAM209AQ5JX71 171 aa16.73■□□□□ 0.27
MBD3-209ENST00000592012 MEX3BQ6ZN04 569 aaKnown RBP16.73■□□□□ 0.27
MBD3-209ENST00000592012 RNF141Q8WVD5 230 aa16.73■□□□□ 0.27
MBD3-209ENST00000592012 STARD4Q96DR4 205 aa16.73■□□□□ 0.27
MBD3-209ENST00000592012 NRIP2Q9BQI9 281 aa16.73■□□□□ 0.27
MBD3-209ENST00000592012 ZC4H2Q9NQZ6 224 aa16.73■□□□□ 0.27
MBD3-209ENST00000592012 AMDHD2Q9Y303 409 aa16.73■□□□□ 0.27
MBD3-209ENST00000592012 H0YL77 283 aa16.72■□□□□ 0.27
MBD3-209ENST00000592012 WDR1O75083 606 aa16.72■□□□□ 0.27
MBD3-209ENST00000592012 PGA5P0DJD9 388 aa16.72■□□□□ 0.27
MBD3-209ENST00000592012 C1QTNF12Q5T7M4 302 aa16.72■□□□□ 0.27
MBD3-209ENST00000592012 TMEM268Q5VZI3 342 aa16.72■□□□□ 0.27
MBD3-209ENST00000592012 RPL7L1Q6DKI1 246 aaKnown RBP16.72■□□□□ 0.27
MBD3-209ENST00000592012 ZNF610Q8N9Z0 462 aa16.72■□□□□ 0.27
MBD3-209ENST00000592012 OR4A4PQ8NGN8 299 aa16.72■□□□□ 0.27
MBD3-209ENST00000592012 OR1S2Q8NGQ3 325 aa16.72■□□□□ 0.27
MBD3-209ENST00000592012 SUN5Q8TC36 379 aa16.72■□□□□ 0.27
MBD3-209ENST00000592012 TMEM56Q96MV1 263 aa16.72■□□□□ 0.27
MBD3-209ENST00000592012 USB1Q9BQ65 265 aaKnown RBP16.72■□□□□ 0.27
MBD3-209ENST00000592012 TMEM56-RWDD3S4R434 201 aa16.72■□□□□ 0.27
MBD3-209ENST00000592012 MUC6Q6W4X9 2439 aa16.72■□□□□ 0.27
MBD3-209ENST00000592012 CGAP01215 116 aa16.72■□□□□ 0.27
MBD3-209ENST00000592012 SEM1Q6ZVN7 128 aa16.72■□□□□ 0.27
MBD3-209ENST00000592012 CXorf67Q86X51 503 aaPredicted RBP16.72■□□□□ 0.27
MBD3-209ENST00000592012 PLEKHA2Q9HB19 425 aa16.72■□□□□ 0.27
MBD3-209ENST00000592012 CCL28Q9NRJ3 127 aa16.72■□□□□ 0.27
MBD3-209ENST00000592012 TREM2Q9NZC2 230 aa16.72■□□□□ 0.27
MBD3-209ENST00000592012 HEATR1Q9H583 2144 aaKnown RBP16.71■□□□□ 0.27
MBD3-209ENST00000592012 IGHV3-64DA0A0J9YX35 117 aa16.71■□□□□ 0.27
MBD3-209ENST00000592012 E5RGE8 158 aa16.71■□□□□ 0.27
MBD3-209ENST00000592012 OR2H2O95918 312 aa16.71■□□□□ 0.27
MBD3-209ENST00000592012 TMEM33P57088 247 aa16.71■□□□□ 0.27
MBD3-209ENST00000592012 SRPXP78539 464 aa16.71■□□□□ 0.27
MBD3-209ENST00000592012 ZNF146Q15072 292 aa16.71■□□□□ 0.27
MBD3-209ENST00000592012 OR8G1Q15617 311 aa16.71■□□□□ 0.27
MBD3-209ENST00000592012 GPHA2Q96T91 129 aa16.71■□□□□ 0.27
MBD3-209ENST00000592012 NSG2Q9Y328 171 aa16.71■□□□□ 0.27
MBD3-209ENST00000592012 SLC33A1O00400 549 aaPredicted RBP16.71■□□□□ 0.26
MBD3-209ENST00000592012 HLA-DRB3P79483 266 aa16.71■□□□□ 0.26
MBD3-209ENST00000592012 ZNF324BQ6AW86 544 aaPredicted RBP16.71■□□□□ 0.26
MBD3-209ENST00000592012 GALNT11Q8NCW6 608 aa16.71■□□□□ 0.26
MBD3-209ENST00000592012 MARC2Q969Z3 335 aa16.71■□□□□ 0.26
MBD3-209ENST00000592012 OPN3Q9H1Y3 402 aaPredicted RBP16.71■□□□□ 0.26
MBD3-209ENST00000592012 PIGMQ9H3S5 423 aa16.71■□□□□ 0.26
MBD3-209ENST00000592012 ZNF71Q9NQZ8 489 aaPredicted RBP16.71■□□□□ 0.26
MBD3-209ENST00000592012 TINAGQ9UJW2 476 aa16.71■□□□□ 0.26
MBD3-209ENST00000592012 UBE2J1Q9Y385 318 aaPredicted RBP16.71■□□□□ 0.26
MBD3-209ENST00000592012 GRPP07492 148 aa16.7■□□□□ 0.26
MBD3-209ENST00000592012 CECR9P0C854 216 aa16.7■□□□□ 0.26
MBD3-209ENST00000592012 OR4D5Q8NGN0 318 aa16.7■□□□□ 0.26
MBD3-209ENST00000592012 OR10J5Q8NHC4 309 aa16.7■□□□□ 0.26
MBD3-209ENST00000592012 TAF9BQ9HBM6 251 aa16.7■□□□□ 0.26
MBD3-209ENST00000592012 ZFP57Q9NU63 452 aa16.7■□□□□ 0.26
MBD3-209ENST00000592012 ASF1BQ9NVP2 202 aa16.7■□□□□ 0.26
MBD3-209ENST00000592012 FBXL17Q9UF56 701 aa16.7■□□□□ 0.26
MBD3-209ENST00000592012 TMEM210A6NLX4 147 aa16.7■□□□□ 0.26
MBD3-209ENST00000592012 SIRPB1O00241 398 aa16.7■□□□□ 0.26
MBD3-209ENST00000592012 HSD17B6O14756 317 aa16.7■□□□□ 0.26
MBD3-209ENST00000592012 MLNRO43193 412 aa16.7■□□□□ 0.26
MBD3-209ENST00000592012 NXPH2O95156 264 aa16.7■□□□□ 0.26
MBD3-209ENST00000592012 IGLV1-44P01699 117 aa16.7■□□□□ 0.26
MBD3-209ENST00000592012 MDH2P40926 338 aaKnown RBP16.7■□□□□ 0.26
MBD3-209ENST00000592012 NBL1P41271 181 aa16.7■□□□□ 0.26
MBD3-209ENST00000592012 EIF5AP63241 154 aaKnown RBP16.7■□□□□ 0.26
MBD3-209ENST00000592012 BOLLQ8N9W6 283 aaKnown RBP16.7■□□□□ 0.26
MBD3-209ENST00000592012 OR8G5Q8NG78 346 aa16.7■□□□□ 0.26
MBD3-209ENST00000592012 CABLES2Q9BTV7 478 aa16.7■□□□□ 0.26
MBD3-209ENST00000592012 OBP2BQ9NPH6 170 aa16.7■□□□□ 0.26
MBD3-209ENST00000592012 PROCRQ9UNN8 238 aa16.7■□□□□ 0.26
MBD3-209ENST00000592012 OR2W1Q9Y3N9 320 aa16.7■□□□□ 0.26
MBD3-209ENST00000592012 MBD3L4A6NDZ8 208 aaPredicted RBP16.69■□□□□ 0.26
MBD3-209ENST00000592012 MBD3L3A6NE82 208 aaPredicted RBP16.69■□□□□ 0.26
MBD3-209ENST00000592012 MBD3L5A6NJ08 208 aaPredicted RBP16.69■□□□□ 0.26
MBD3-209ENST00000592012 CDS2O95674 445 aa16.69■□□□□ 0.26
MBD3-209ENST00000592012 HOXD4P09016 255 aaPredicted RBP16.69■□□□□ 0.26
MBD3-209ENST00000592012 ZNF497Q6ZNH5 498 aa16.69■□□□□ 0.26
MBD3-209ENST00000592012 H1FOOQ8IZA3 346 aaPredicted RBP16.69■□□□□ 0.26
MBD3-209ENST00000592012 SELENOHQ8IZQ5 122 aaKnown RBP16.69■□□□□ 0.26
MBD3-209ENST00000592012 SPERTQ8NA61 448 aa16.69■□□□□ 0.26
MBD3-209ENST00000592012 MBD3L2Q8NHZ7 208 aaPredicted RBP16.69■□□□□ 0.26
MBD3-209ENST00000592012 PLPPR1Q8TBJ4 325 aa16.69■□□□□ 0.26
MBD3-209ENST00000592012 KIRREL1Q96J84 757 aa16.69■□□□□ 0.26
MBD3-209ENST00000592012 PURGQ9UJV8 347 aaKnown RBP16.69■□□□□ 0.26
MBD3-209ENST00000592012 NKX2-6A6NCS4 301 aa16.69■□□□□ 0.26
MBD3-209ENST00000592012 B8ZZF3 427 aa16.69■□□□□ 0.26
MBD3-209ENST00000592012 ST8SIA3O43173 380 aa16.69■□□□□ 0.26
MBD3-209ENST00000592012 GAPDHP04406 335 aaKnown RBP16.69■□□□□ 0.26
MBD3-209ENST00000592012 ACAA1P09110 424 aaPredicted RBP16.69■□□□□ 0.26
MBD3-209ENST00000592012 P2RY6Q15077 328 aa16.69■□□□□ 0.26
MBD3-209ENST00000592012 SHEQ5VZ18 495 aa16.69■□□□□ 0.26
MBD3-209ENST00000592012 Q6ZS92 163 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms