RNA–Protein interactions for RNA: ENST00000591709.1

POLR2E-208, Transcript of RNA polymerase II subunit E, human

TSL 2

Gene POLR2E, Length 685 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
POLR2E-208	ENST00000591709	RPS11	P62280	158 aa	Known RBP eCLIP	13.48	□□□□□ -0.25
POLR2E-208	ENST00000591709	RIPK1	Q13546	671 aa		13.48	□□□□□ -0.25
POLR2E-208	ENST00000591709	RSU1	Q15404	277 aa		13.48	□□□□□ -0.25
POLR2E-208	ENST00000591709	PXT1	Q8NFP0	134 aa		13.48	□□□□□ -0.25
POLR2E-208	ENST00000591709	OR10K1	Q8NGX5	313 aa		13.48	□□□□□ -0.25
POLR2E-208	ENST00000591709	MALSU1	Q96EH3	234 aa		13.48	□□□□□ -0.25
POLR2E-208	ENST00000591709	OR14A2	Q96R54	314 aa		13.48	□□□□□ -0.25
POLR2E-208	ENST00000591709	KRTAP17-1	Q9BYP8	105 aa		13.48	□□□□□ -0.25
POLR2E-208	ENST00000591709	PAK1IP1	Q9NWT1	392 aa	Predicted RBP	13.48	□□□□□ -0.25
POLR2E-208	ENST00000591709	CKLF	Q9UBR5	152 aa		13.48	□□□□□ -0.25
POLR2E-208	ENST00000591709	LCE6A	A0A183	80 aa		13.47	□□□□□ -0.25
POLR2E-208	ENST00000591709	C17orf98	A8MV24	154 aa		13.47	□□□□□ -0.25
POLR2E-208	ENST00000591709	MGST3	O14880	152 aa		13.47	□□□□□ -0.25
POLR2E-208	ENST00000591709	DEGS1	O15121	323 aa		13.47	□□□□□ -0.25
POLR2E-208	ENST00000591709	CDRT1	O95170	752 aa		13.47	□□□□□ -0.25
POLR2E-208	ENST00000591709	ZNF93	P35789	620 aa	Predicted RBP	13.47	□□□□□ -0.25
POLR2E-208	ENST00000591709	MTNR1B	P49286	362 aa		13.47	□□□□□ -0.25
POLR2E-208	ENST00000591709	DGCR2	P98153	550 aa		13.47	□□□□□ -0.25
POLR2E-208	ENST00000591709	MEF2C	Q06413	473 aa	Predicted RBP	13.47	□□□□□ -0.25
POLR2E-208	ENST00000591709		Q6P435	159 aa		13.47	□□□□□ -0.25
POLR2E-208	ENST00000591709	TCF23	Q7RTU1	214 aa		13.47	□□□□□ -0.25
POLR2E-208	ENST00000591709	ZNF714	Q96N38	554 aa		13.47	□□□□□ -0.25
POLR2E-208	ENST00000591709	LYST	Q99698	3801 aa		13.47	□□□□□ -0.25
POLR2E-208	ENST00000591709	MND1	Q9BWT6	205 aa		13.47	□□□□□ -0.25
POLR2E-208	ENST00000591709	ANKRD60	Q9BZ19	345 aa		13.47	□□□□□ -0.25
POLR2E-208	ENST00000591709	ING3	Q9NXR8	418 aa		13.47	□□□□□ -0.25
POLR2E-208	ENST00000591709	ING4	Q9UNL4	249 aa		13.47	□□□□□ -0.25
POLR2E-208	ENST00000591709	HILPDA	Q9Y5L2	63 aa		13.47	□□□□□ -0.25
POLR2E-208	ENST00000591709	TRAV8-7	A0A075B6U6	113 aa		13.46	□□□□□ -0.25
POLR2E-208	ENST00000591709	MAGEA13P	A6NCF6	341 aa		13.46	□□□□□ -0.25
POLR2E-208	ENST00000591709	HTR3B	O95264	441 aa		13.46	□□□□□ -0.25
POLR2E-208	ENST00000591709	ATP6V1G2	O95670	118 aa		13.46	□□□□□ -0.25
POLR2E-208	ENST00000591709	LPL	P06858	475 aa		13.46	□□□□□ -0.25
POLR2E-208	ENST00000591709	IGFBP3	P17936	291 aa	Predicted RBP	13.46	□□□□□ -0.25
POLR2E-208	ENST00000591709	PTGFR	P43088	359 aa		13.46	□□□□□ -0.25
POLR2E-208	ENST00000591709	DYNLT3	P51808	116 aa		13.46	□□□□□ -0.25
POLR2E-208	ENST00000591709	P2RX3	P56373	397 aa		13.46	□□□□□ -0.25
POLR2E-208	ENST00000591709	ZNF626	Q68DY1	528 aa		13.46	□□□□□ -0.25
POLR2E-208	ENST00000591709	ELP2	Q6IA86	826 aa		13.46	□□□□□ -0.25
POLR2E-208	ENST00000591709	TRAPPC6B	Q86SZ2	158 aa		13.46	□□□□□ -0.25
POLR2E-208	ENST00000591709	OR51D1	Q8NGF3	324 aa		13.46	□□□□□ -0.25
POLR2E-208	ENST00000591709	ZNF184	Q99676	751 aa	Predicted RBP	13.46	□□□□□ -0.25
POLR2E-208	ENST00000591709	MCRIP2	Q9BUT9	160 aa	Known RBP	13.46	□□□□□ -0.25
POLR2E-208	ENST00000591709	TPRKB	Q9Y3C4	175 aa		13.46	□□□□□ -0.25
POLR2E-208	ENST00000591709	LINC00312	Q9Y6C7	94 aa		13.46	□□□□□ -0.25
POLR2E-208	ENST00000591709	KIAA2026	Q5HYC2	2103 aa		13.46	□□□□□ -0.26
POLR2E-208	ENST00000591709	TRBV5-7	A0A0A0MS05	114 aa		13.45	□□□□□ -0.26
POLR2E-208	ENST00000591709	SLC33A1	O00400	549 aa	Predicted RBP	13.45	□□□□□ -0.26
POLR2E-208	ENST00000591709	HSPB6	O14558	160 aa		13.45	□□□□□ -0.26
POLR2E-208	ENST00000591709	ERP29	P30040	261 aa	Known RBP	13.45	□□□□□ -0.26
POLR2E-208	ENST00000591709	GLIPR1	P48060	266 aa		13.45	□□□□□ -0.26
POLR2E-208	ENST00000591709	HSPA13	P48723	471 aa		13.45	□□□□□ -0.26
POLR2E-208	ENST00000591709	AES	Q08117	197 aa		13.45	□□□□□ -0.26
POLR2E-208	ENST00000591709	DYNC1I2	Q13409	638 aa	Known RBP	13.45	□□□□□ -0.26
POLR2E-208	ENST00000591709	ATXN7L3	Q14CW9	347 aa	Predicted RBP	13.45	□□□□□ -0.26
POLR2E-208	ENST00000591709	MED22	Q15528	200 aa		13.45	□□□□□ -0.26
POLR2E-208	ENST00000591709	RNLS	Q5VYX0	342 aa		13.45	□□□□□ -0.26
POLR2E-208	ENST00000591709	UNQ9370/PRO34162	Q6UXP9	181 aa		13.45	□□□□□ -0.26
POLR2E-208	ENST00000591709	CHST4	Q8NCG5	386 aa		13.45	□□□□□ -0.26
POLR2E-208	ENST00000591709	OR13D1	Q8NGV5	346 aa		13.45	□□□□□ -0.26
POLR2E-208	ENST00000591709	CNBD2	Q96M20	576 aa		13.45	□□□□□ -0.26
POLR2E-208	ENST00000591709	DERL3	Q96Q80	235 aa		13.45	□□□□□ -0.26
POLR2E-208	ENST00000591709	PRR25	Q96S07	402 aa		13.45	□□□□□ -0.26
POLR2E-208	ENST00000591709	S100A13	Q99584	98 aa		13.45	□□□□□ -0.26
POLR2E-208	ENST00000591709	METTL9	Q9H1A3	318 aa		13.45	□□□□□ -0.26
POLR2E-208	ENST00000591709	LSM4	Q9Y4Z0	139 aa	Known RBP	13.45	□□□□□ -0.26
POLR2E-208	ENST00000591709	FUOM	A2VDF0	154 aa		13.44	□□□□□ -0.26
POLR2E-208	ENST00000591709	SH2D7	A6NKC9	451 aa	Predicted RBP	13.44	□□□□□ -0.26
POLR2E-208	ENST00000591709	GPX5	O75715	221 aa		13.44	□□□□□ -0.26
POLR2E-208	ENST00000591709	RBP4	P02753	201 aa		13.44	□□□□□ -0.26
POLR2E-208	ENST00000591709	CSTB	P04080	98 aa	Known RBP	13.44	□□□□□ -0.26
POLR2E-208	ENST00000591709	MAS1	P04201	325 aa		13.44	□□□□□ -0.26
POLR2E-208	ENST00000591709	CD1A	P06126	327 aa		13.44	□□□□□ -0.26
POLR2E-208	ENST00000591709	IGHV1-8	P0DP01	117 aa		13.44	□□□□□ -0.26
POLR2E-208	ENST00000591709	FST	P19883	344 aa		13.44	□□□□□ -0.26
POLR2E-208	ENST00000591709	THBS3	P49746	956 aa		13.44	□□□□□ -0.26
POLR2E-208	ENST00000591709	BDH1	Q02338	343 aa		13.44	□□□□□ -0.26
POLR2E-208	ENST00000591709	SPHAR	Q15513	63 aa		13.44	□□□□□ -0.26
POLR2E-208	ENST00000591709	PIGY	Q3MUY2	71 aa		13.44	□□□□□ -0.26
POLR2E-208	ENST00000591709	ABCA11P	Q4W5N1	156 aa		13.44	□□□□□ -0.26
POLR2E-208	ENST00000591709	KRBOX4	Q5JUW0	171 aa		13.44	□□□□□ -0.26
POLR2E-208	ENST00000591709	ASCL4	Q6XD76	172 aa		13.44	□□□□□ -0.26
POLR2E-208	ENST00000591709	JAGN1	Q8N5M9	183 aa		13.44	□□□□□ -0.26
POLR2E-208	ENST00000591709	CCDC90B	Q9GZT6	254 aa		13.44	□□□□□ -0.26
POLR2E-208	ENST00000591709	LSM2	Q9Y333	95 aa	Known RBP	13.44	□□□□□ -0.26
POLR2E-208	ENST00000591709	SORL1	Q92673	2214 aa		13.43	□□□□□ -0.26
POLR2E-208	ENST00000591709	TRGV10	A0A0A0MS01	117 aa		13.43	□□□□□ -0.26
POLR2E-208	ENST00000591709	RGS10	O43665	173 aa		13.43	□□□□□ -0.26
POLR2E-208	ENST00000591709	SERPINA2	P20848	420 aa		13.43	□□□□□ -0.26
POLR2E-208	ENST00000591709	INSL4	Q14641	139 aa		13.43	□□□□□ -0.26
POLR2E-208	ENST00000591709	PAN3	Q58A45	887 aa	Known RBP	13.43	□□□□□ -0.26
POLR2E-208	ENST00000591709		Q8NFD4	153 aa		13.43	□□□□□ -0.26
POLR2E-208	ENST00000591709	OR11H6	Q8NGC7	330 aa		13.43	□□□□□ -0.26
POLR2E-208	ENST00000591709	OR51T1	Q8NGJ9	327 aa		13.43	□□□□□ -0.26
POLR2E-208	ENST00000591709	COQ2	Q96H96	371 aa		13.43	□□□□□ -0.26
POLR2E-208	ENST00000591709	TMED9	Q9BVK6	235 aa		13.43	□□□□□ -0.26
POLR2E-208	ENST00000591709	DUSP21	Q9H596	190 aa		13.43	□□□□□ -0.26
POLR2E-208	ENST00000591709	UBE2J1	Q9Y385	318 aa	Predicted RBP	13.43	□□□□□ -0.26
POLR2E-208	ENST00000591709	HUWE1	Q7Z6Z7	4374 aa	Known RBP	13.43	□□□□□ -0.26
POLR2E-208	ENST00000591709	TRAV24	A0A0B4J272	114 aa		13.42	□□□□□ -0.26

Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms