RNA–Protein interactions for RNA: ENST00000591126.5

SMAD4-212, Transcript of SMAD family member 4, humanhuman

TSL 1 (best)

Gene SMAD4, Length 4,970 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-212ENST00000591126 ODAMA1E959 279 aa5.4□□□□□ -1.54
SMAD4-212ENST00000591126 FCGR3BO75015 233 aa5.4□□□□□ -1.54
SMAD4-212ENST00000591126 WNT2P09544 360 aa5.4□□□□□ -1.54
SMAD4-212ENST00000591126 METTL15P1P0C7V9 234 aa5.4□□□□□ -1.54
SMAD4-212ENST00000591126 FSTP19883 344 aa5.4□□□□□ -1.54
SMAD4-212ENST00000591126 OPRL1P41146 370 aa5.4□□□□□ -1.54
SMAD4-212ENST00000591126 OXA1LQ15070 435 aa5.4□□□□□ -1.54
SMAD4-212ENST00000591126 UNQ5815/PRO19632Q6UWF5 114 aa5.4□□□□□ -1.54
SMAD4-212ENST00000591126 DGAT2L6Q6ZPD8 337 aa5.4□□□□□ -1.54
SMAD4-212ENST00000591126 RFLNBQ8N5W9 214 aa5.4□□□□□ -1.54
SMAD4-212ENST00000591126 POC1AQ8NBT0 407 aa5.4□□□□□ -1.54
SMAD4-212ENST00000591126 WNT5BQ9H1J7 359 aa5.4□□□□□ -1.54
SMAD4-212ENST00000591126 SLC6A13Q9NSD5 602 aa5.4□□□□□ -1.54
SMAD4-212ENST00000591126 TCRBV4S1A1TA0A5B7 111 aa5.4□□□□□ -1.54
SMAD4-212ENST00000591126 BMPR1BO00238 502 aa5.4□□□□□ -1.54
SMAD4-212ENST00000591126 CCL2P13500 99 aa5.4□□□□□ -1.54
SMAD4-212ENST00000591126 JUNBP17275 347 aaPredicted RBP5.4□□□□□ -1.54
SMAD4-212ENST00000591126 SHC1P29353 583 aa5.4□□□□□ -1.54
SMAD4-212ENST00000591126 PMELP40967 661 aa5.4□□□□□ -1.54
SMAD4-212ENST00000591126 RPL8P62917 257 aaKnown RBP5.4□□□□□ -1.54
SMAD4-212ENST00000591126 Q0VFX4 171 aa5.4□□□□□ -1.54
SMAD4-212ENST00000591126 PCNPQ8WW12 178 aaKnown RBP5.4□□□□□ -1.54
SMAD4-212ENST00000591126 DOCK6Q96HP0 2047 aa5.4□□□□□ -1.54
SMAD4-212ENST00000591126 PDCD1LG2Q9BQ51 273 aa5.4□□□□□ -1.54
SMAD4-212ENST00000591126 C1QTNF5Q9BXJ0 243 aa5.4□□□□□ -1.54
SMAD4-212ENST00000591126 FAM212BQ9NTI7 297 aaPredicted RBP5.4□□□□□ -1.54
SMAD4-212ENST00000591126 C20orf141Q9NUB4 165 aa5.4□□□□□ -1.54
SMAD4-212ENST00000591126 SLC25A15Q9Y619 301 aa5.4□□□□□ -1.54
SMAD4-212ENST00000591126 TRBV5-3A0A0A0MS03 114 aa5.4□□□□□ -1.55
SMAD4-212ENST00000591126 MSMBP08118 114 aa5.4□□□□□ -1.55
SMAD4-212ENST00000591126 TRAPPC2P0DI81 140 aa5.4□□□□□ -1.55
SMAD4-212ENST00000591126 TRAPPC2BP0DI82 140 aa5.4□□□□□ -1.55
SMAD4-212ENST00000591126 COX5AP20674 150 aa5.4□□□□□ -1.55
SMAD4-212ENST00000591126 NPY1RP25929 384 aa5.4□□□□□ -1.55
SMAD4-212ENST00000591126 SUCLG1P53597 346 aaKnown RBP5.4□□□□□ -1.55
SMAD4-212ENST00000591126 ARF6P62330 175 aa5.4□□□□□ -1.55
SMAD4-212ENST00000591126 CFAP77Q6ZQR2 320 aa5.4□□□□□ -1.55
SMAD4-212ENST00000591126 THNSL2Q86YJ6 484 aa5.4□□□□□ -1.55
SMAD4-212ENST00000591126 C15orf54Q8N8G6 183 aa5.4□□□□□ -1.55
SMAD4-212ENST00000591126 ZDHHC22Q8N966 263 aa5.4□□□□□ -1.55
SMAD4-212ENST00000591126 LFNGQ8NES3 379 aa5.4□□□□□ -1.55
SMAD4-212ENST00000591126 ADGRL4Q9HBW9 690 aa5.4□□□□□ -1.55
SMAD4-212ENST00000591126 MRPL22Q9NWU5 206 aaKnown RBP5.4□□□□□ -1.55
SMAD4-212ENST00000591126 UFC1Q9Y3C8 167 aa5.4□□□□□ -1.55
SMAD4-212ENST00000591126 A0A0U1RQK1 487 aa5.4□□□□□ -1.55
SMAD4-212ENST00000591126 A0A1W2PS29 197 aa5.4□□□□□ -1.55
SMAD4-212ENST00000591126 ZNF320A2RRD8 509 aa5.4□□□□□ -1.55
SMAD4-212ENST00000591126 E5RGE8 158 aa5.4□□□□□ -1.55
SMAD4-212ENST00000591126 SLC25A17O43808 307 aa5.4□□□□□ -1.55
SMAD4-212ENST00000591126 GPANK1O95872 356 aa5.4□□□□□ -1.55
SMAD4-212ENST00000591126 OR5G3P0C626 314 aa5.4□□□□□ -1.55
SMAD4-212ENST00000591126 CDKN1AP38936 164 aa5.4□□□□□ -1.55
SMAD4-212ENST00000591126 OPRK1P41145 380 aa5.4□□□□□ -1.55
SMAD4-212ENST00000591126 CRYBB2P43320 205 aa5.4□□□□□ -1.55
SMAD4-212ENST00000591126 SNRPD3P62318 126 aaKnown RBP5.4□□□□□ -1.55
SMAD4-212ENST00000591126 SELENOTP62341 195 aa5.4□□□□□ -1.55
SMAD4-212ENST00000591126 GUCA2BQ16661 112 aa5.4□□□□□ -1.55
SMAD4-212ENST00000591126 FAM162BQ5T6X4 162 aa5.4□□□□□ -1.55
SMAD4-212ENST00000591126 OR8U1Q8NH10 309 aa5.4□□□□□ -1.55
SMAD4-212ENST00000591126 C20orf24Q9BUV8 137 aa5.4□□□□□ -1.55
SMAD4-212ENST00000591126 OR2D2Q9H210 308 aa5.4□□□□□ -1.55
SMAD4-212ENST00000591126 PARP11Q9NR21 331 aa5.4□□□□□ -1.55
SMAD4-212ENST00000591126 CALYQ9NYX4 217 aa5.4□□□□□ -1.55
SMAD4-212ENST00000591126 MAB21L2Q9Y586 359 aa5.4□□□□□ -1.55
SMAD4-212ENST00000591126 KIAA1324LA8MWY0 1029 aaPredicted RBP5.39□□□□□ -1.55
SMAD4-212ENST00000591126 NPIPB11E5RHQ5 1161 aa5.39□□□□□ -1.55
SMAD4-212ENST00000591126 FXYD1O00168 92 aa5.39□□□□□ -1.55
SMAD4-212ENST00000591126 OGG1O15527 345 aa5.39□□□□□ -1.55
SMAD4-212ENST00000591126 KIR2DL2P43627 348 aaPredicted RBP5.39□□□□□ -1.55
SMAD4-212ENST00000591126 MFAP4P55083 255 aa5.39□□□□□ -1.55
SMAD4-212ENST00000591126 PHYHD1Q5SRE7 291 aa5.39□□□□□ -1.55
SMAD4-212ENST00000591126 PDPNQ86YL7 162 aa5.39□□□□□ -1.55
SMAD4-212ENST00000591126 OR10K1Q8NGX5 313 aa5.39□□□□□ -1.55
SMAD4-212ENST00000591126 OR4Q3Q8NH05 313 aa5.39□□□□□ -1.55
SMAD4-212ENST00000591126 SLC7A6Q92536 515 aa5.39□□□□□ -1.55
SMAD4-212ENST00000591126 HTRA1Q92743 480 aa5.39□□□□□ -1.55
SMAD4-212ENST00000591126 ACTR3CQ9C0K3 210 aaPredicted RBP5.39□□□□□ -1.55
SMAD4-212ENST00000591126 TAF9BQ9HBM6 251 aa5.39□□□□□ -1.55
SMAD4-212ENST00000591126 Q9N2K0 584 aa5.39□□□□□ -1.55
SMAD4-212ENST00000591126 ST6GALNAC2Q9UJ37 374 aa5.39□□□□□ -1.55
SMAD4-212ENST00000591126 BOLA1Q9Y3E2 137 aa5.39□□□□□ -1.55
SMAD4-212ENST00000591126 SLC25A4P12235 298 aa5.39□□□□□ -1.55
SMAD4-212ENST00000591126 RBM11P57052 281 aaKnown RBP5.39□□□□□ -1.55
SMAD4-212ENST00000591126 ZNF431Q8TF32 576 aaPredicted RBP5.39□□□□□ -1.55
SMAD4-212ENST00000591126 Q96MF0 132 aa5.39□□□□□ -1.55
SMAD4-212ENST00000591126 LTBP2Q14767 1821 aa5.39□□□□□ -1.55
SMAD4-212ENST00000591126 KIAA1671Q9BY89 1806 aa5.39□□□□□ -1.55
SMAD4-212ENST00000591126 PATE4P0C8F1 98 aa5.39□□□□□ -1.55
SMAD4-212ENST00000591126 CD33P20138 364 aa5.39□□□□□ -1.55
SMAD4-212ENST00000591126 FGF9P31371 208 aaPredicted RBP5.39□□□□□ -1.55
SMAD4-212ENST00000591126 GDNFP39905 211 aa5.39□□□□□ -1.55
SMAD4-212ENST00000591126 KIR3DL2P43630 455 aa5.39□□□□□ -1.55
SMAD4-212ENST00000591126 ALDH3B2P48448 385 aa5.39□□□□□ -1.55
SMAD4-212ENST00000591126 RHOBP62745 196 aa5.39□□□□□ -1.55
SMAD4-212ENST00000591126 RRN3P1Q2M238 152 aa5.39□□□□□ -1.55
SMAD4-212ENST00000591126 SUMF2Q8NBJ7 301 aa5.39□□□□□ -1.55
SMAD4-212ENST00000591126 RTN4IP1Q8WWV3 396 aaPredicted RBP5.39□□□□□ -1.55
SMAD4-212ENST00000591126 OR5P3Q8WZ94 311 aa5.39□□□□□ -1.55
SMAD4-212ENST00000591126 MALSU1Q96EH3 234 aa5.39□□□□□ -1.55
SMAD4-212ENST00000591126 SPDEFO95238 335 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms