RNA–Protein interactions for RNA: ENST00000590696.1

DDX39A-215, Transcript of DExD-box helicase 39A, humanhuman

TSL 4

Gene DDX39A, Length 563 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-215ENST00000590696 MRGPRDQ8TDS7 321 aa17.24■□□□□ 0.35
DDX39A-215ENST00000590696 TNFAIP8L1Q8WVP5 186 aa17.24■□□□□ 0.35
DDX39A-215ENST00000590696 CPNE2Q96FN4 548 aaPredicted RBP17.24■□□□□ 0.35
DDX39A-215ENST00000590696 NOL4LQ96MY1 436 aaPredicted RBP17.24■□□□□ 0.35
DDX39A-215ENST00000590696 LINC00574Q9H8X3 128 aa17.24■□□□□ 0.35
DDX39A-215ENST00000590696 NPIPB11E5RHQ5 1161 aa17.23■□□□□ 0.35
DDX39A-215ENST00000590696 H3BNX3 289 aa17.23■□□□□ 0.35
DDX39A-215ENST00000590696 GBX2P52951 348 aaPredicted RBP17.23■□□□□ 0.35
DDX39A-215ENST00000590696 HNF4GQ14541 408 aa17.23■□□□□ 0.35
DDX39A-215ENST00000590696 RSU1Q15404 277 aa17.23■□□□□ 0.35
DDX39A-215ENST00000590696 PIGYQ3MUY2 71 aa17.23■□□□□ 0.35
DDX39A-215ENST00000590696 ETV3LQ6ZN32 361 aa17.23■□□□□ 0.35
DDX39A-215ENST00000590696 MRPL41Q8IXM3 137 aaKnown RBP17.23■□□□□ 0.35
DDX39A-215ENST00000590696 CBR4Q8N4T8 237 aa17.23■□□□□ 0.35
DDX39A-215ENST00000590696 C5orf56Q8N8D9 126 aa17.23■□□□□ 0.35
DDX39A-215ENST00000590696 OR51D1Q8NGF3 324 aa17.23■□□□□ 0.35
DDX39A-215ENST00000590696 OR51A2Q8NGJ7 313 aa17.23■□□□□ 0.35
DDX39A-215ENST00000590696 HAVCR2Q8TDQ0 301 aa17.23■□□□□ 0.35
DDX39A-215ENST00000590696 TRAV39A0A0B4J263 110 aa17.22■□□□□ 0.35
DDX39A-215ENST00000590696 SOX2P48431 317 aa17.22■□□□□ 0.35
DDX39A-215ENST00000590696 RAB7AP51149 207 aa17.22■□□□□ 0.35
DDX39A-215ENST00000590696 RPL23AP62750 156 aaKnown RBP17.22■□□□□ 0.35
DDX39A-215ENST00000590696 EGFEM1PQ0D2K5 195 aa17.22■□□□□ 0.35
DDX39A-215ENST00000590696 ZNF529Q6P280 563 aa17.22■□□□□ 0.35
DDX39A-215ENST00000590696 OR8H3Q8N146 312 aa17.22■□□□□ 0.35
DDX39A-215ENST00000590696 RHOXF1Q8NHV9 184 aa17.22■□□□□ 0.35
DDX39A-215ENST00000590696 CHPT1Q8WUD6 406 aa17.22■□□□□ 0.35
DDX39A-215ENST00000590696 Q96MT0 163 aa17.22■□□□□ 0.35
DDX39A-215ENST00000590696 FAM192AQ9GZU8 254 aa17.22■□□□□ 0.35
DDX39A-215ENST00000590696 LINC00527Q9UJ94 153 aa17.22■□□□□ 0.35
DDX39A-215ENST00000590696 SERPINE3A8MV23 424 aa17.21■□□□□ 0.35
DDX39A-215ENST00000590696 FGF16O43320 207 aa17.21■□□□□ 0.35
DDX39A-215ENST00000590696 MPZL2O60487 215 aa17.21■□□□□ 0.35
DDX39A-215ENST00000590696 HTR3BO95264 441 aa17.21■□□□□ 0.35
DDX39A-215ENST00000590696 IGKV1D-33P01593 117 aa17.21■□□□□ 0.35
DDX39A-215ENST00000590696 IGKV1-33P01594 117 aa17.21■□□□□ 0.35
DDX39A-215ENST00000590696 SSTR5P35346 364 aa17.21■□□□□ 0.35
DDX39A-215ENST00000590696 KCNJ3P48549 501 aa17.21■□□□□ 0.35
DDX39A-215ENST00000590696 THBS3P49746 956 aa17.21■□□□□ 0.35
DDX39A-215ENST00000590696 GTF2A1P52655 376 aaPredicted RBP17.21■□□□□ 0.35
DDX39A-215ENST00000590696 PAX5Q02548 391 aa17.21■□□□□ 0.35
DDX39A-215ENST00000590696 RAB40BQ12829 278 aa17.21■□□□□ 0.35
DDX39A-215ENST00000590696 SLC16A12Q6ZSM3 486 aa17.21■□□□□ 0.35
DDX39A-215ENST00000590696 Q8NFD4 153 aa17.21■□□□□ 0.35
DDX39A-215ENST00000590696 OR10A7Q8NGE5 316 aa17.21■□□□□ 0.35
DDX39A-215ENST00000590696 OR52I1Q8NGK6 324 aa17.21■□□□□ 0.35
DDX39A-215ENST00000590696 OR10X1Q8NGY0 326 aa17.21■□□□□ 0.35
DDX39A-215ENST00000590696 JAM3Q9BX67 310 aa17.21■□□□□ 0.35
DDX39A-215ENST00000590696 GPR61Q9BZJ8 451 aa17.21■□□□□ 0.35
DDX39A-215ENST00000590696 TAS2R4Q9NYW5 299 aa17.21■□□□□ 0.35
DDX39A-215ENST00000590696 A0A1W2PPE3 182 aa17.2■□□□□ 0.34
DDX39A-215ENST00000590696 C11orf87Q6NUJ2 197 aa17.2■□□□□ 0.34
DDX39A-215ENST00000590696 ASCL4Q6XD76 172 aa17.2■□□□□ 0.34
DDX39A-215ENST00000590696 C18orf65Q6ZTR6 163 aa17.2■□□□□ 0.34
DDX39A-215ENST00000590696 OR2W3Q7Z3T1 314 aa17.2■□□□□ 0.34
DDX39A-215ENST00000590696 SUMF2Q8NBJ7 301 aa17.2■□□□□ 0.34
DDX39A-215ENST00000590696 RGP1Q92546 391 aaPredicted RBP17.2■□□□□ 0.34
DDX39A-215ENST00000590696 DPF1Q92782 380 aa17.2■□□□□ 0.34
DDX39A-215ENST00000590696 DPCDQ9BVM2 203 aaPredicted RBP17.2■□□□□ 0.34
DDX39A-215ENST00000590696 ZNF581Q9P0T4 197 aa17.2■□□□□ 0.34
DDX39A-215ENST00000590696 CDRT1O95170 752 aa17.19■□□□□ 0.34
DDX39A-215ENST00000590696 ZFP1Q6P2D0 407 aa17.19■□□□□ 0.34
DDX39A-215ENST00000590696 C8orf86Q6ZUL3 223 aa17.19■□□□□ 0.34
DDX39A-215ENST00000590696 SLC35E3Q7Z769 313 aa17.19■□□□□ 0.34
DDX39A-215ENST00000590696 ZFP57Q9NU63 452 aa17.19■□□□□ 0.34
DDX39A-215ENST00000590696 FAM118AQ9NWS6 357 aa17.19■□□□□ 0.34
DDX39A-215ENST00000590696 ING4Q9UNL4 249 aa17.19■□□□□ 0.34
DDX39A-215ENST00000590696 ST3GAL6Q9Y274 331 aa17.19■□□□□ 0.34
DDX39A-215ENST00000590696 RPL36Q9Y3U8 105 aaKnown RBP17.19■□□□□ 0.34
DDX39A-215ENST00000590696 COL7A1Q02388 2944 aa17.19■□□□□ 0.34
DDX39A-215ENST00000590696 NUDT19A8MXV4 375 aa17.18■□□□□ 0.34
DDX39A-215ENST00000590696 HSD17B6O14756 317 aa17.18■□□□□ 0.34
DDX39A-215ENST00000590696 IGHG2P01859 326 aa17.18■□□□□ 0.34
DDX39A-215ENST00000590696 SLC35B1P78383 322 aa17.18■□□□□ 0.34
DDX39A-215ENST00000590696 MOB3BQ86TA1 216 aa17.18■□□□□ 0.34
DDX39A-215ENST00000590696 GPR148Q8TDV2 347 aa17.18■□□□□ 0.34
DDX39A-215ENST00000590696 MRPS18AQ9NVS2 196 aaKnown RBP17.18■□□□□ 0.34
DDX39A-215ENST00000590696 LOC100130705A0A1B0GUX0 176 aa17.17■□□□□ 0.34
DDX39A-215ENST00000590696 OR7C1O76099 320 aaPredicted RBP17.17■□□□□ 0.34
DDX39A-215ENST00000590696 GAPDHP04406 335 aaKnown RBP17.17■□□□□ 0.34
DDX39A-215ENST00000590696 CD2P06729 351 aa17.17■□□□□ 0.34
DDX39A-215ENST00000590696 LIMS3P0CW19 117 aa17.17■□□□□ 0.34
DDX39A-215ENST00000590696 LIMS4P0CW20 117 aa17.17■□□□□ 0.34
DDX39A-215ENST00000590696 GZMHP20718 246 aa17.17■□□□□ 0.34
DDX39A-215ENST00000590696 MYCNOSP40205 109 aa17.17■□□□□ 0.34
DDX39A-215ENST00000590696 ZNF816Q0VGE8 651 aaPredicted RBP17.17■□□□□ 0.34
DDX39A-215ENST00000590696 KLHL22Q53GT1 634 aa17.17■□□□□ 0.34
DDX39A-215ENST00000590696 FOXRED2Q8IWF2 684 aa17.17■□□□□ 0.34
DDX39A-215ENST00000590696 KLHL30-AS1Q8NEE0 82 aa17.17■□□□□ 0.34
DDX39A-215ENST00000590696 SLC29A1Q99808 456 aa17.17■□□□□ 0.34
DDX39A-215ENST00000590696 MCRIP2Q9BUT9 160 aaKnown RBP17.17■□□□□ 0.34
DDX39A-215ENST00000590696 C9orf16Q9BUW7 83 aa17.17■□□□□ 0.34
DDX39A-215ENST00000590696 METTL9Q9H1A3 318 aa17.17■□□□□ 0.34
DDX39A-215ENST00000590696 IFT22Q9H7X7 185 aa17.17■□□□□ 0.34
DDX39A-215ENST00000590696 IGHV3-72A0A0B4J1Y9 119 aa17.16■□□□□ 0.34
DDX39A-215ENST00000590696 IGHV1-3A0A0C4DH29 117 aa17.16■□□□□ 0.34
DDX39A-215ENST00000590696 LINC01548A6NM66 108 aa17.16■□□□□ 0.34
DDX39A-215ENST00000590696 CCRL2O00421 344 aa17.16■□□□□ 0.34
DDX39A-215ENST00000590696 CSTBP04080 98 aaKnown RBP17.16■□□□□ 0.34
DDX39A-215ENST00000590696 SLC6A1P30531 599 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms