RNA–Protein interactions for RNA: ENST00000590627.5

GCDH-213, Transcript of glutaryl-CoA dehydrogenase, humanhuman

TSL 1 (best)

Gene GCDH, Length 1,051 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-213ENST00000590627 POM121CA8CG34 1229 aa13.74□□□□□ -0.21
GCDH-213ENST00000590627 HAX1O00165 279 aa13.74□□□□□ -0.21
GCDH-213ENST00000590627 MGST3O14880 152 aa13.74□□□□□ -0.21
GCDH-213ENST00000590627 DUX4L2P0CJ85 424 aa13.74□□□□□ -0.21
GCDH-213ENST00000590627 DUX4L3P0CJ86 424 aa13.74□□□□□ -0.21
GCDH-213ENST00000590627 DUX4L4P0CJ87 422 aa13.74□□□□□ -0.21
GCDH-213ENST00000590627 DUX4L5P0CJ88 424 aa13.74□□□□□ -0.21
GCDH-213ENST00000590627 DUX4L6P0CJ89 424 aa13.74□□□□□ -0.21
GCDH-213ENST00000590627 DUX4L7P0CJ90 424 aa13.74□□□□□ -0.21
GCDH-213ENST00000590627 MRPS10P82664 201 aaKnown RBP13.74□□□□□ -0.21
GCDH-213ENST00000590627 IL18Q14116 193 aa13.74□□□□□ -0.21
GCDH-213ENST00000590627 ZNF79Q15937 498 aa13.74□□□□□ -0.21
GCDH-213ENST00000590627 OLFML2AQ68BL7 652 aa13.74□□□□□ -0.21
GCDH-213ENST00000590627 DUX4L9Q6RFH8 374 aaPredicted RBP13.74□□□□□ -0.21
GCDH-213ENST00000590627 FAM131AQ6UXB0 335 aa13.74□□□□□ -0.21
GCDH-213ENST00000590627 NLRC3Q7RTR2 1065 aa13.74□□□□□ -0.21
GCDH-213ENST00000590627 NEIL1Q96FI4 390 aaPredicted RBP13.74□□□□□ -0.21
GCDH-213ENST00000590627 CYYR1Q96J86 154 aa13.74□□□□□ -0.21
GCDH-213ENST00000590627 PPA2Q9H2U2 334 aa13.74□□□□□ -0.21
GCDH-213ENST00000590627 RIMS4Q9H426 269 aaPredicted RBP13.74□□□□□ -0.21
GCDH-213ENST00000590627 NCOR1P1Q9H4R4 102 aa13.74□□□□□ -0.21
GCDH-213ENST00000590627 DUX4Q9UBX2 424 aa13.74□□□□□ -0.21
GCDH-213ENST00000590627 UBE2QL1A1L167 161 aa13.73□□□□□ -0.21
GCDH-213ENST00000590627 SULT1C2O00338 296 aa13.73□□□□□ -0.21
GCDH-213ENST00000590627 HSPB6O14558 160 aa13.73□□□□□ -0.21
GCDH-213ENST00000590627 NDUFB3O43676 98 aa13.73□□□□□ -0.21
GCDH-213ENST00000590627 FCN3O75636 299 aa13.73□□□□□ -0.21
GCDH-213ENST00000590627 SELLP14151 372 aa13.73□□□□□ -0.21
GCDH-213ENST00000590627 RPS2P15880 293 aaKnown RBP13.73□□□□□ -0.21
GCDH-213ENST00000590627 ERP29P30040 261 aaKnown RBP13.73□□□□□ -0.21
GCDH-213ENST00000590627 PRSS3P35030 304 aa13.73□□□□□ -0.21
GCDH-213ENST00000590627 SRSF2Q01130 221 aaKnown RBP13.73□□□□□ -0.21
GCDH-213ENST00000590627 GRK1Q15835 563 aa13.73□□□□□ -0.21
GCDH-213ENST00000590627 LRRC10Q5BKY1 277 aa13.73□□□□□ -0.21
GCDH-213ENST00000590627 RSBN1Q5VWQ0 802 aaPredicted RBP13.73□□□□□ -0.21
GCDH-213ENST00000590627 SLC35E4Q6ICL7 350 aa13.73□□□□□ -0.21
GCDH-213ENST00000590627 ZNF841Q6ZN19 808 aa13.73□□□□□ -0.21
GCDH-213ENST00000590627 SNX29P2Q8IUI4 249 aa13.73□□□□□ -0.21
GCDH-213ENST00000590627 LINC01356Q8N9X3 169 aa13.73□□□□□ -0.21
GCDH-213ENST00000590627 OR8B3Q8NGG8 313 aa13.73□□□□□ -0.21
GCDH-213ENST00000590627 C1orf159Q96HA4 380 aa13.73□□□□□ -0.21
GCDH-213ENST00000590627 OR8B2Q96RD0 313 aa13.73□□□□□ -0.21
GCDH-213ENST00000590627 CHST6Q9GZX3 395 aa13.73□□□□□ -0.21
GCDH-213ENST00000590627 SCPEP1Q9HB40 452 aa13.73□□□□□ -0.21
GCDH-213ENST00000590627 ETAA1Q9NY74 926 aa13.73□□□□□ -0.21
GCDH-213ENST00000590627 SLC25A10Q9UBX3 287 aaPredicted RBP13.73□□□□□ -0.21
GCDH-213ENST00000590627 AK3Q9UIJ7 227 aa13.73□□□□□ -0.21
GCDH-213ENST00000590627 ELF5Q9UKW6 265 aaPredicted RBP13.73□□□□□ -0.21
GCDH-213ENST00000590627 PCDHB10Q9UN67 800 aa13.73□□□□□ -0.21
GCDH-213ENST00000590627 TRBV6-6A0A0A6YYG2 114 aa13.72□□□□□ -0.21
GCDH-213ENST00000590627 DVL1O14640 695 aa13.72□□□□□ -0.21
GCDH-213ENST00000590627 GPR37O15354 613 aa13.72□□□□□ -0.21
GCDH-213ENST00000590627 TCF21O43680 179 aa13.72□□□□□ -0.21
GCDH-213ENST00000590627 GSTZ1O43708 216 aaPredicted RBP13.72□□□□□ -0.21
GCDH-213ENST00000590627 NAPSAO96009 420 aa13.72□□□□□ -0.21
GCDH-213ENST00000590627 IGHV2-5P01817 119 aa13.72□□□□□ -0.21
GCDH-213ENST00000590627 NPY4RP50391 375 aa13.72□□□□□ -0.21
GCDH-213ENST00000590627 GNG2P59768 71 aa13.72□□□□□ -0.21
GCDH-213ENST00000590627 LMO4P61968 165 aa13.72□□□□□ -0.21
GCDH-213ENST00000590627 MADCAM1Q13477 382 aa13.72□□□□□ -0.21
GCDH-213ENST00000590627 C11orf91Q3C1V1 193 aa13.72□□□□□ -0.21
GCDH-213ENST00000590627 ZNF497Q6ZNH5 498 aa13.72□□□□□ -0.21
GCDH-213ENST00000590627 GDPD1Q8N9F7 314 aa13.72□□□□□ -0.21
GCDH-213ENST00000590627 TMEM185AQ8NFB2 350 aa13.72□□□□□ -0.21
GCDH-213ENST00000590627 PLPPR1Q8TBJ4 325 aa13.72□□□□□ -0.21
GCDH-213ENST00000590627 NEK7Q8TDX7 302 aa13.72□□□□□ -0.21
GCDH-213ENST00000590627 GPX8Q8TED1 209 aa13.72□□□□□ -0.21
GCDH-213ENST00000590627 COQ2Q96H96 371 aa13.72□□□□□ -0.21
GCDH-213ENST00000590627 TSC22D3Q99576 134 aa13.72□□□□□ -0.21
GCDH-213ENST00000590627 CMSS1Q9BQ75 279 aaKnown RBP13.72□□□□□ -0.21
GCDH-213ENST00000590627 SRRQ9GZT4 340 aa13.72□□□□□ -0.21
GCDH-213ENST00000590627 FUOMA2VDF0 154 aa13.71□□□□□ -0.21
GCDH-213ENST00000590627 SSX5O60225 188 aa13.71□□□□□ -0.21
GCDH-213ENST00000590627 MT-ND4P03905 459 aa13.71□□□□□ -0.21
GCDH-213ENST00000590627 LPLP06858 475 aa13.71□□□□□ -0.21
GCDH-213ENST00000590627 CD3GP09693 182 aa13.71□□□□□ -0.21
GCDH-213ENST00000590627 PTHLHP12272 177 aa13.71□□□□□ -0.21
GCDH-213ENST00000590627 DTYMKP23919 212 aa13.71□□□□□ -0.21
GCDH-213ENST00000590627 IL2RGP31785 369 aa13.71□□□□□ -0.21
GCDH-213ENST00000590627 P2RX3P56373 397 aa13.71□□□□□ -0.21
GCDH-213ENST00000590627 ARFRP1Q13795 201 aa13.71□□□□□ -0.21
GCDH-213ENST00000590627 ZNF846Q147U1 533 aa13.71□□□□□ -0.21
GCDH-213ENST00000590627 ATXN7L3Q14CW9 347 aaPredicted RBP13.71□□□□□ -0.21
GCDH-213ENST00000590627 CLDND2Q8NHS1 167 aa13.71□□□□□ -0.21
GCDH-213ENST00000590627 DYRK2Q92630 601 aa13.71□□□□□ -0.21
GCDH-213ENST00000590627 OCSTAMPQ9BR26 566 aa13.71□□□□□ -0.21
GCDH-213ENST00000590627 WDR12Q9GZL7 423 aaKnown RBP13.71□□□□□ -0.21
GCDH-213ENST00000590627 C12orf4Q9NQ89 552 aa13.71□□□□□ -0.21
GCDH-213ENST00000590627 TMEM30CPA0ZSE6 113 aa13.7□□□□□ -0.22
GCDH-213ENST00000590627 MEIOCA2RUB1 952 aa13.7□□□□□ -0.22
GCDH-213ENST00000590627 GABARAPH6UMI1 98 aa13.7□□□□□ -0.22
GCDH-213ENST00000590627 CD40LGP29965 261 aa13.7□□□□□ -0.22
GCDH-213ENST00000590627 SRP14P37108 136 aaKnown RBP13.7□□□□□ -0.22
GCDH-213ENST00000590627 CBX5P45973 191 aa13.7□□□□□ -0.22
GCDH-213ENST00000590627 PPP5CP53041 499 aa13.7□□□□□ -0.22
GCDH-213ENST00000590627 DVL1P1P54792 670 aaPredicted RBP13.7□□□□□ -0.22
GCDH-213ENST00000590627 AESQ08117 197 aa13.7□□□□□ -0.22
GCDH-213ENST00000590627 SRSF7Q16629 238 aaKnown RBP eCLIP13.7□□□□□ -0.22
GCDH-213ENST00000590627 PYDC2Q56P42 97 aa13.7□□□□□ -0.22
GCDH-213ENST00000590627 KRBOX4Q5JUW0 171 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms