RNA–Protein interactions for RNA: ENST00000589949.1

H3F3B-209, Transcript of H3 histone family member 3B, humanhuman

TSL 2

Gene H3F3B, Length 842 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-209ENST00000589949 CCDC159P0C7I6 412 aa14.3□□□□□ -0.12
H3F3B-209ENST00000589949 RAB3AP20336 220 aa14.3□□□□□ -0.12
H3F3B-209ENST00000589949 CEACAM3P40198 252 aa14.3□□□□□ -0.12
H3F3B-209ENST00000589949 ETV1P50549 477 aa14.3□□□□□ -0.12
H3F3B-209ENST00000589949 LTC4SQ16873 150 aa14.3□□□□□ -0.12
H3F3B-209ENST00000589949 OR2G6Q5TZ20 316 aa14.3□□□□□ -0.12
H3F3B-209ENST00000589949 FAM53AQ6NSI3 398 aaPredicted RBP14.3□□□□□ -0.12
H3F3B-209ENST00000589949 OR9G1Q8NH87 305 aa14.3□□□□□ -0.12
H3F3B-209ENST00000589949 MRGPRDQ8TDS7 321 aa14.3□□□□□ -0.12
H3F3B-209ENST00000589949 CAPSLQ8WWF8 208 aa14.3□□□□□ -0.12
H3F3B-209ENST00000589949 AKR1E2Q96JD6 320 aa14.3□□□□□ -0.12
H3F3B-209ENST00000589949 Q96MT0 163 aa14.3□□□□□ -0.12
H3F3B-209ENST00000589949 RDH12Q96NR8 316 aa14.3□□□□□ -0.12
H3F3B-209ENST00000589949 JAM3Q9BX67 310 aa14.3□□□□□ -0.12
H3F3B-209ENST00000589949 RAB26Q9ULW5 256 aa14.3□□□□□ -0.12
H3F3B-209ENST00000589949 MPZL2O60487 215 aa14.29□□□□□ -0.12
H3F3B-209ENST00000589949 IL1AP01583 271 aa14.29□□□□□ -0.12
H3F3B-209ENST00000589949 SNRNP70P08621 437 aaKnown RBP14.29□□□□□ -0.12
H3F3B-209ENST00000589949 SSTR5P35346 364 aa14.29□□□□□ -0.12
H3F3B-209ENST00000589949 LOXL3P58215 753 aa14.29□□□□□ -0.12
H3F3B-209ENST00000589949 DRAM1Q8N682 238 aa14.29□□□□□ -0.12
H3F3B-209ENST00000589949 OR56B4Q8NH76 319 aa14.29□□□□□ -0.12
H3F3B-209ENST00000589949 NCOR1P1Q9H4R4 102 aa14.29□□□□□ -0.12
H3F3B-209ENST00000589949 FGF20Q9NP95 211 aaPredicted RBP14.29□□□□□ -0.12
H3F3B-209ENST00000589949 SMPD3Q9NY59 655 aaPredicted RBP14.29□□□□□ -0.12
H3F3B-209ENST00000589949 IDI2-AS1Q9NZ38 188 aa14.29□□□□□ -0.12
H3F3B-209ENST00000589949 TSSC4Q9Y5U2 329 aaPredicted RBP14.29□□□□□ -0.12
H3F3B-209ENST00000589949 A0A1W2PPE3 182 aa14.28□□□□□ -0.12
H3F3B-209ENST00000589949 OOSP1A8MZH6 123 aa14.28□□□□□ -0.12
H3F3B-209ENST00000589949 H3BUI4 141 aa14.28□□□□□ -0.12
H3F3B-209ENST00000589949 LALBAP00709 142 aa14.28□□□□□ -0.12
H3F3B-209ENST00000589949 CD33P20138 364 aa14.28□□□□□ -0.12
H3F3B-209ENST00000589949 GNG10P50151 68 aa14.28□□□□□ -0.12
H3F3B-209ENST00000589949 PAX5Q02548 391 aa14.28□□□□□ -0.12
H3F3B-209ENST00000589949 MRPL28Q13084 256 aaKnown RBP14.28□□□□□ -0.12
H3F3B-209ENST00000589949 IL13RA2Q14627 380 aa14.28□□□□□ -0.12
H3F3B-209ENST00000589949 C9orf152Q5JTZ5 239 aa14.28□□□□□ -0.12
H3F3B-209ENST00000589949 ZNF565Q8N9K5 539 aa14.28□□□□□ -0.12
H3F3B-209ENST00000589949 OR13C5Q8NGS8 318 aa14.28□□□□□ -0.12
H3F3B-209ENST00000589949 TOMM40LQ969M1 308 aa14.28□□□□□ -0.12
H3F3B-209ENST00000589949 CREB3L1Q96BA8 519 aa14.28□□□□□ -0.12
H3F3B-209ENST00000589949 GPER1Q99527 375 aa14.28□□□□□ -0.12
H3F3B-209ENST00000589949 FAM192AQ9GZU8 254 aa14.28□□□□□ -0.12
H3F3B-209ENST00000589949 Q9H521 79 aa14.28□□□□□ -0.12
H3F3B-209ENST00000589949 RPL36Q9Y3U8 105 aaKnown RBP14.28□□□□□ -0.12
H3F3B-209ENST00000589949 DENRO43583 198 aaKnown RBP14.27□□□□□ -0.13
H3F3B-209ENST00000589949 HTR3BO95264 441 aa14.27□□□□□ -0.13
H3F3B-209ENST00000589949 CLIC3O95833 236 aa14.27□□□□□ -0.13
H3F3B-209ENST00000589949 RPSAP08865 295 aaKnown RBP14.27□□□□□ -0.13
H3F3B-209ENST00000589949 PF4V1P10720 104 aa14.27□□□□□ -0.13
H3F3B-209ENST00000589949 MNDAP41218 407 aa14.27□□□□□ -0.13
H3F3B-209ENST00000589949 ARHGDIBP52566 201 aa14.27□□□□□ -0.13
H3F3B-209ENST00000589949 KRTAP10-11P60412 298 aa14.27□□□□□ -0.13
H3F3B-209ENST00000589949 HNF4GQ14541 408 aa14.27□□□□□ -0.13
H3F3B-209ENST00000589949 RSU1Q15404 277 aa14.27□□□□□ -0.13
H3F3B-209ENST00000589949 CCDC144NLQ6NUI1 221 aa14.27□□□□□ -0.13
H3F3B-209ENST00000589949 ZNF329Q86UD4 541 aa14.27□□□□□ -0.13
H3F3B-209ENST00000589949 THNSL2Q86YJ6 484 aa14.27□□□□□ -0.13
H3F3B-209ENST00000589949 OSR2Q8N2R0 312 aa14.27□□□□□ -0.13
H3F3B-209ENST00000589949 SUMF2Q8NBJ7 301 aa14.27□□□□□ -0.13
H3F3B-209ENST00000589949 GPR148Q8TDV2 347 aa14.27□□□□□ -0.13
H3F3B-209ENST00000589949 RPEQ96AT9 228 aa14.27□□□□□ -0.13
H3F3B-209ENST00000589949 RBMXL1Q96E39 390 aaKnown RBP14.27□□□□□ -0.13
H3F3B-209ENST00000589949 CYYR1Q96J86 154 aa14.27□□□□□ -0.13
H3F3B-209ENST00000589949 A0A1W2PP11 408 aa14.26□□□□□ -0.13
H3F3B-209ENST00000589949 MAGEA13PA6NCF6 341 aa14.26□□□□□ -0.13
H3F3B-209ENST00000589949 FAM106CPP0CH98 169 aa14.26□□□□□ -0.13
H3F3B-209ENST00000589949 C21orf33P30042 268 aaPredicted RBP14.26□□□□□ -0.13
H3F3B-209ENST00000589949 KLHL22Q53GT1 634 aa14.26□□□□□ -0.13
H3F3B-209ENST00000589949 RPL22L1Q6P5R6 122 aaKnown RBP14.26□□□□□ -0.13
H3F3B-209ENST00000589949 ETV3LQ6ZN32 361 aa14.26□□□□□ -0.13
H3F3B-209ENST00000589949 C18orf65Q6ZTR6 163 aa14.26□□□□□ -0.13
H3F3B-209ENST00000589949 DHRSXQ8N5I4 330 aa14.26□□□□□ -0.13
H3F3B-209ENST00000589949 C5orf56Q8N8D9 126 aa14.26□□□□□ -0.13
H3F3B-209ENST00000589949 UBALD1Q8TB05 177 aa14.26□□□□□ -0.13
H3F3B-209ENST00000589949 TFAP2CQ92754 450 aa14.26□□□□□ -0.13
H3F3B-209ENST00000589949 TMEM106AQ96A25 262 aa14.26□□□□□ -0.13
H3F3B-209ENST00000589949 NOL4LQ96MY1 436 aaPredicted RBP14.26□□□□□ -0.13
H3F3B-209ENST00000589949 MYCBPQ99417 103 aaPredicted RBP14.26□□□□□ -0.13
H3F3B-209ENST00000589949 DPCDQ9BVM2 203 aaPredicted RBP14.26□□□□□ -0.13
H3F3B-209ENST00000589949 BARHL1Q9BZE3 327 aa14.26□□□□□ -0.13
H3F3B-209ENST00000589949 CLEC2DQ9UHP7 191 aa14.26□□□□□ -0.13
H3F3B-209ENST00000589949 ST3GAL6Q9Y274 331 aa14.26□□□□□ -0.13
H3F3B-209ENST00000589949 MOB4Q9Y3A3 225 aa14.26□□□□□ -0.13
H3F3B-209ENST00000589949 HSPE1-MOB4S4R3N1 261 aa14.26□□□□□ -0.13
H3F3B-209ENST00000589949 COL7A1Q02388 2944 aa14.26□□□□□ -0.13
H3F3B-209ENST00000589949 LINC01548A6NM66 108 aa14.25□□□□□ -0.13
H3F3B-209ENST00000589949 C15orf65H3BRN8 121 aa14.25□□□□□ -0.13
H3F3B-209ENST00000589949 K7EIL1 84 aa14.25□□□□□ -0.13
H3F3B-209ENST00000589949 M0QZK8 103 aa14.25□□□□□ -0.13
H3F3B-209ENST00000589949 GEMIN2O14893 280 aaKnown RBP14.25□□□□□ -0.13
H3F3B-209ENST00000589949 OGG1O15527 345 aa14.25□□□□□ -0.13
H3F3B-209ENST00000589949 RBM11P57052 281 aaKnown RBP14.25□□□□□ -0.13
H3F3B-209ENST00000589949 MADCAM1Q13477 382 aa14.25□□□□□ -0.13
H3F3B-209ENST00000589949 CCDC58Q4VC31 144 aa14.25□□□□□ -0.13
H3F3B-209ENST00000589949 OR4X2Q8NGF9 303 aa14.25□□□□□ -0.13
H3F3B-209ENST00000589949 IFT22Q9H7X7 185 aa14.25□□□□□ -0.13
H3F3B-209ENST00000589949 LINC00527Q9UJ94 153 aa14.25□□□□□ -0.13
H3F3B-209ENST00000589949 ING4Q9UNL4 249 aa14.25□□□□□ -0.13
H3F3B-209ENST00000589949 MAGEB3O15480 346 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 99 ms