RNA–Protein interactions for RNA: ENST00000588857.5

ATG4D-209, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 1,555 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-209ENST00000588857 A0A1B0GVG6 124 aa18.59■□□□□ 0.57
ATG4D-209ENST00000588857 K7N7A8 449 aa18.59■□□□□ 0.57
ATG4D-209ENST00000588857 TCRBP04435 133 aa18.59■□□□□ 0.57
ATG4D-209ENST00000588857 AESQ08117 197 aa18.59■□□□□ 0.57
ATG4D-209ENST00000588857 CDK10Q15131 360 aa18.59■□□□□ 0.57
ATG4D-209ENST00000588857 RSBN1Q5VWQ0 802 aaPredicted RBP18.59■□□□□ 0.57
ATG4D-209ENST00000588857 MOB1BQ7L9L4 216 aa18.59■□□□□ 0.57
ATG4D-209ENST00000588857 GAPTQ8N292 157 aa18.59■□□□□ 0.57
ATG4D-209ENST00000588857 ZNRF1Q8ND25 227 aa18.59■□□□□ 0.57
ATG4D-209ENST00000588857 CCDC107Q8WV48 283 aa18.59■□□□□ 0.57
ATG4D-209ENST00000588857 SLC6A7Q99884 636 aa18.59■□□□□ 0.57
ATG4D-209ENST00000588857 PRRT1Q99946 306 aa18.59■□□□□ 0.57
ATG4D-209ENST00000588857 DNTTIP1Q9H147 329 aa18.59■□□□□ 0.57
ATG4D-209ENST00000588857 EHFQ9NZC4 300 aa18.59■□□□□ 0.57
ATG4D-209ENST00000588857 MAB21L2Q9Y586 359 aa18.59■□□□□ 0.57
ATG4D-209ENST00000588857 TEX15Q9BXT5 2789 aa18.59■□□□□ 0.57
ATG4D-209ENST00000588857 KIAA2026Q5HYC2 2103 aa18.58■□□□□ 0.57
ATG4D-209ENST00000588857 KIR2DS1A0A191URI9 304 aa18.58■□□□□ 0.56
ATG4D-209ENST00000588857 MGST3O14880 152 aa18.58■□□□□ 0.56
ATG4D-209ENST00000588857 KIR2DS4P43632 304 aa18.58■□□□□ 0.56
ATG4D-209ENST00000588857 TSPAN5P62079 268 aa18.58■□□□□ 0.56
ATG4D-209ENST00000588857 BTG1P62324 171 aa18.58■□□□□ 0.56
ATG4D-209ENST00000588857 AKAP6Q13023 2319 aa18.58■□□□□ 0.56
ATG4D-209ENST00000588857 KIR2DS1Q14954 304 aa18.58■□□□□ 0.56
ATG4D-209ENST00000588857 SCGB2B2Q4G0G5 96 aa18.58■□□□□ 0.56
ATG4D-209ENST00000588857 KRBOX4Q5JUW0 171 aa18.58■□□□□ 0.56
ATG4D-209ENST00000588857 ATPAF1Q5TC12 328 aaPredicted RBP18.58■□□□□ 0.56
ATG4D-209ENST00000588857 ZNF788Q6ZQV5 615 aa18.58■□□□□ 0.56
ATG4D-209ENST00000588857 TMEM17Q86X19 198 aa18.58■□□□□ 0.56
ATG4D-209ENST00000588857 ARRDC1Q8N5I2 433 aa18.58■□□□□ 0.56
ATG4D-209ENST00000588857 OR5D13Q8NGL4 314 aa18.58■□□□□ 0.56
ATG4D-209ENST00000588857 MED30Q96HR3 178 aa18.58■□□□□ 0.56
ATG4D-209ENST00000588857 GAFA1Q96PS6 74 aa18.58■□□□□ 0.56
ATG4D-209ENST00000588857 NECAP2Q9NVZ3 263 aa18.58■□□□□ 0.56
ATG4D-209ENST00000588857 MGAT4AQ9UM21 535 aa18.58■□□□□ 0.56
ATG4D-209ENST00000588857 NUBP2Q9Y5Y2 271 aa18.58■□□□□ 0.56
ATG4D-209ENST00000588857 ABCA12Q86UK0 2595 aa18.57■□□□□ 0.56
ATG4D-209ENST00000588857 FBN2P35556 2912 aa18.57■□□□□ 0.56
ATG4D-209ENST00000588857 TRDCB7Z8K6 153 aa18.57■□□□□ 0.56
ATG4D-209ENST00000588857 RP2O75695 350 aa18.57■□□□□ 0.56
ATG4D-209ENST00000588857 LY6HO94772 140 aa18.57■□□□□ 0.56
ATG4D-209ENST00000588857 TK1P04183 234 aa18.57■□□□□ 0.56
ATG4D-209ENST00000588857 ZNF735P0CB33 412 aa18.57■□□□□ 0.56
ATG4D-209ENST00000588857 IL13RA1P78552 427 aa18.57■□□□□ 0.56
ATG4D-209ENST00000588857 ZMYND11Q15326 602 aa18.57■□□□□ 0.56
ATG4D-209ENST00000588857 ZNF880Q6PDB4 577 aa18.57■□□□□ 0.56
ATG4D-209ENST00000588857 IDO2Q6ZQW0 420 aa18.57■□□□□ 0.56
ATG4D-209ENST00000588857 TMEM185AQ8NFB2 350 aa18.57■□□□□ 0.56
ATG4D-209ENST00000588857 CREB3L1Q96BA8 519 aa18.57■□□□□ 0.56
ATG4D-209ENST00000588857 COQ2Q96H96 371 aa18.57■□□□□ 0.56
ATG4D-209ENST00000588857 FAM234AQ9H0X4 552 aa18.57■□□□□ 0.56
ATG4D-209ENST00000588857 NUDT15Q9NV35 164 aa18.57■□□□□ 0.56
ATG4D-209ENST00000588857 KIF25Q9UIL4 384 aa18.57■□□□□ 0.56
ATG4D-209ENST00000588857 USF3Q68DE3 2245 aa18.57■□□□□ 0.56
ATG4D-209ENST00000588857 MEIKINA0A087WXM9 373 aa18.56■□□□□ 0.56
ATG4D-209ENST00000588857 SIGLEC5O15389 551 aa18.56■□□□□ 0.56
ATG4D-209ENST00000588857 TMPRSS2O15393 492 aa18.56■□□□□ 0.56
ATG4D-209ENST00000588857 NDUFA2O43678 99 aa18.56■□□□□ 0.56
ATG4D-209ENST00000588857 F12P00748 615 aaPredicted RBP18.56■□□□□ 0.56
ATG4D-209ENST00000588857 GSTT2P0CG29 244 aa18.56■□□□□ 0.56
ATG4D-209ENST00000588857 RCC1P18754 421 aaPredicted RBP18.56■□□□□ 0.56
ATG4D-209ENST00000588857 PAX5Q02548 391 aa18.56■□□□□ 0.56
ATG4D-209ENST00000588857 EDDM3AQ14507 147 aa18.56■□□□□ 0.56
ATG4D-209ENST00000588857 RBMS2Q15434 407 aaKnown RBP18.56■□□□□ 0.56
ATG4D-209ENST00000588857 OVCH2Q7RTZ1 564 aa18.56■□□□□ 0.56
ATG4D-209ENST00000588857 SLC36A1Q7Z2H8 476 aa18.56■□□□□ 0.56
ATG4D-209ENST00000588857 FAM216BQ8N7L0 139 aa18.56■□□□□ 0.56
ATG4D-209ENST00000588857 CCL19Q99731 98 aa18.56■□□□□ 0.56
ATG4D-209ENST00000588857 SLC2A8Q9NY64 477 aa18.56■□□□□ 0.56
ATG4D-209ENST00000588857 hCG_2014768A0A024R1R8 64 aa18.55■□□□□ 0.56
ATG4D-209ENST00000588857 OVOL3O00110 214 aa18.55■□□□□ 0.56
ATG4D-209ENST00000588857 SDCBPO00560 298 aaPredicted RBP18.55■□□□□ 0.56
ATG4D-209ENST00000588857 NDUFB6O95139 128 aa18.55■□□□□ 0.56
ATG4D-209ENST00000588857 EFNA4P52798 201 aa18.55■□□□□ 0.56
ATG4D-209ENST00000588857 BTN2A1Q7KYR7 527 aa18.55■□□□□ 0.56
ATG4D-209ENST00000588857 UPRTQ96BW1 309 aa18.55■□□□□ 0.56
ATG4D-209ENST00000588857 TIMD4Q96H15 378 aa18.55■□□□□ 0.56
ATG4D-209ENST00000588857 GINS4Q9BRT9 223 aa18.55■□□□□ 0.56
ATG4D-209ENST00000588857 MARVELD1Q9BSK0 173 aa18.55■□□□□ 0.56
ATG4D-209ENST00000588857 KCNIP1Q9NZI2 227 aa18.55■□□□□ 0.56
ATG4D-209ENST00000588857 CSMD1Q96PZ7 3565 aa18.55■□□□□ 0.56
ATG4D-209ENST00000588857 APCP25054 2843 aa18.55■□□□□ 0.56
ATG4D-209ENST00000588857 TRAV6A0A075B6T7 132 aa18.55■□□□□ 0.56
ATG4D-209ENST00000588857 FABP7O15540 132 aa18.55■□□□□ 0.56
ATG4D-209ENST00000588857 FSTL3O95633 263 aa18.55■□□□□ 0.56
ATG4D-209ENST00000588857 OR5H8P0DN80 308 aa18.55■□□□□ 0.56
ATG4D-209ENST00000588857 GLIPR1P48060 266 aa18.55■□□□□ 0.56
ATG4D-209ENST00000588857 SLC25A21Q9BQT8 299 aaPredicted RBP18.55■□□□□ 0.56
ATG4D-209ENST00000588857 TMEM246Q9BRR3 403 aa18.55■□□□□ 0.56
ATG4D-209ENST00000588857 CHODLQ9H9P2 273 aa18.55■□□□□ 0.56
ATG4D-209ENST00000588857 TRAV39A0A0B4J263 110 aa18.54■□□□□ 0.56
ATG4D-209ENST00000588857 A0A1B0GW55 424 aa18.54■□□□□ 0.56
ATG4D-209ENST00000588857 FUOMA2VDF0 154 aa18.54■□□□□ 0.56
ATG4D-209ENST00000588857 INMT-MINDY4F8WBC2 141 aa18.54■□□□□ 0.56
ATG4D-209ENST00000588857 ADAM20O43506 726 aa18.54■□□□□ 0.56
ATG4D-209ENST00000588857 DUX4L2P0CJ85 424 aa18.54■□□□□ 0.56
ATG4D-209ENST00000588857 DUX4L3P0CJ86 424 aa18.54■□□□□ 0.56
ATG4D-209ENST00000588857 DUX4L4P0CJ87 422 aa18.54■□□□□ 0.56
ATG4D-209ENST00000588857 DUX4L5P0CJ88 424 aa18.54■□□□□ 0.56
ATG4D-209ENST00000588857 DUX4L6P0CJ89 424 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms