RNA–Protein interactions for RNA: ENST00000588667.5

ATG4D-208, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 1,619 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-208ENST00000588667 FAM90A15PP0C7V4 464 aa16.71■□□□□ 0.27
ATG4D-208ENST00000588667 FAM90A13PP0C7W8 464 aa16.71■□□□□ 0.27
ATG4D-208ENST00000588667 FAM90A14PP0C7W9 464 aa16.71■□□□□ 0.27
ATG4D-208ENST00000588667 FAM90A24PP0C7X0 464 aa16.71■□□□□ 0.27
ATG4D-208ENST00000588667 RFX2P48378 723 aa16.71■□□□□ 0.27
ATG4D-208ENST00000588667 GNG2P59768 71 aa16.71■□□□□ 0.27
ATG4D-208ENST00000588667 TAF9Q16594 264 aa16.71■□□□□ 0.27
ATG4D-208ENST00000588667 CR1LQ2VPA4 569 aa16.71■□□□□ 0.27
ATG4D-208ENST00000588667 NHLRC3Q5JS37 347 aa16.71■□□□□ 0.27
ATG4D-208ENST00000588667 DCAF12L2Q5VW00 463 aa16.71■□□□□ 0.27
ATG4D-208ENST00000588667 ARHGAP5-AS1Q96IT6 56 aa16.71■□□□□ 0.27
ATG4D-208ENST00000588667 GAFA1Q96PS6 74 aa16.71■□□□□ 0.27
ATG4D-208ENST00000588667 A0A1B0GW55 424 aa16.7■□□□□ 0.26
ATG4D-208ENST00000588667 SERPINE3A8MV23 424 aa16.7■□□□□ 0.26
ATG4D-208ENST00000588667 F8VVB4 439 aa16.7■□□□□ 0.26
ATG4D-208ENST00000588667 F8VWA3 439 aa16.7■□□□□ 0.26
ATG4D-208ENST00000588667 DVL1O14640 695 aa16.7■□□□□ 0.26
ATG4D-208ENST00000588667 SIGLEC5O15389 551 aa16.7■□□□□ 0.26
ATG4D-208ENST00000588667 KNG1P01042 644 aa16.7■□□□□ 0.26
ATG4D-208ENST00000588667 DUX4L2P0CJ85 424 aa16.7■□□□□ 0.26
ATG4D-208ENST00000588667 DUX4L3P0CJ86 424 aa16.7■□□□□ 0.26
ATG4D-208ENST00000588667 DUX4L4P0CJ87 422 aa16.7■□□□□ 0.26
ATG4D-208ENST00000588667 DUX4L5P0CJ88 424 aa16.7■□□□□ 0.26
ATG4D-208ENST00000588667 DUX4L6P0CJ89 424 aa16.7■□□□□ 0.26
ATG4D-208ENST00000588667 DUX4L7P0CJ90 424 aa16.7■□□□□ 0.26
ATG4D-208ENST00000588667 GABRA2P47869 451 aa16.7■□□□□ 0.26
ATG4D-208ENST00000588667 IL13RA1P78552 427 aa16.7■□□□□ 0.26
ATG4D-208ENST00000588667 PIGYQ3MUY2 71 aa16.7■□□□□ 0.26
ATG4D-208ENST00000588667 DUX4L9Q6RFH8 374 aaPredicted RBP16.7■□□□□ 0.26
ATG4D-208ENST00000588667 MED30Q96HR3 178 aa16.7■□□□□ 0.26
ATG4D-208ENST00000588667 NEDD4LQ96PU5 975 aa16.7■□□□□ 0.26
ATG4D-208ENST00000588667 PLEKHJ1Q9NW61 149 aa16.7■□□□□ 0.26
ATG4D-208ENST00000588667 DUX4Q9UBX2 424 aa16.7■□□□□ 0.26
ATG4D-208ENST00000588667 CDC42EP3Q9UKI2 254 aa16.7■□□□□ 0.26
ATG4D-208ENST00000588667 HSF4Q9ULV5 492 aa16.7■□□□□ 0.26
ATG4D-208ENST00000588667 NF1P21359 2839 aa16.7■□□□□ 0.26
ATG4D-208ENST00000588667 RFPL4AA6NLU0 287 aa16.7■□□□□ 0.26
ATG4D-208ENST00000588667 RFPL4AL1F8VTS6 287 aa16.7■□□□□ 0.26
ATG4D-208ENST00000588667 H3BUI4 141 aa16.7■□□□□ 0.26
ATG4D-208ENST00000588667 J3QLI3 93 aa16.7■□□□□ 0.26
ATG4D-208ENST00000588667 GEMIN2O14893 280 aaKnown RBP16.7■□□□□ 0.26
ATG4D-208ENST00000588667 C11orf91Q3C1V1 193 aa16.7■□□□□ 0.26
ATG4D-208ENST00000588667 FAM120AOSQ5T036 256 aa16.7■□□□□ 0.26
ATG4D-208ENST00000588667 CCBE1Q6UXH8 406 aaPredicted RBP16.7■□□□□ 0.26
ATG4D-208ENST00000588667 TRAPPC6BQ86SZ2 158 aa16.7■□□□□ 0.26
ATG4D-208ENST00000588667 EMG1Q92979 244 aaKnown RBP16.7■□□□□ 0.26
ATG4D-208ENST00000588667 SDSLQ96GA7 329 aa16.7■□□□□ 0.26
ATG4D-208ENST00000588667 PECRQ9BY49 303 aa16.7■□□□□ 0.26
ATG4D-208ENST00000588667 MMP26Q9NRE1 261 aa16.7■□□□□ 0.26
ATG4D-208ENST00000588667 LPAR3Q9UBY5 353 aa16.7■□□□□ 0.26
ATG4D-208ENST00000588667 ZNF107Q9UII5 783 aaPredicted RBP16.7■□□□□ 0.26
ATG4D-208ENST00000588667 ELF5Q9UKW6 265 aaPredicted RBP16.7■□□□□ 0.26
ATG4D-208ENST00000588667 KCNK7Q9Y2U2 307 aa16.7■□□□□ 0.26
ATG4D-208ENST00000588667 FAM240BA0A1B0GVZ2 78 aa16.69■□□□□ 0.26
ATG4D-208ENST00000588667 NAP1L6A6NFF2 107 aa16.69■□□□□ 0.26
ATG4D-208ENST00000588667 NDUFB3O43676 98 aa16.69■□□□□ 0.26
ATG4D-208ENST00000588667 CA11O75493 328 aa16.69■□□□□ 0.26
ATG4D-208ENST00000588667 FCN3O75636 299 aa16.69■□□□□ 0.26
ATG4D-208ENST00000588667 HNF1AP20823 631 aa16.69■□□□□ 0.26
ATG4D-208ENST00000588667 FAUP35544 74 aaKnown RBP16.69■□□□□ 0.26
ATG4D-208ENST00000588667 PAX2Q02962 417 aa16.69■□□□□ 0.26
ATG4D-208ENST00000588667 IKZF1Q13422 519 aa16.69■□□□□ 0.26
ATG4D-208ENST00000588667 ARFRP1Q13795 201 aa16.69■□□□□ 0.26
ATG4D-208ENST00000588667 LRRC10Q5BKY1 277 aa16.69■□□□□ 0.26
ATG4D-208ENST00000588667 NKAPLQ5M9Q1 402 aa16.69■□□□□ 0.26
ATG4D-208ENST00000588667 CD276Q5ZPR3 534 aa16.69■□□□□ 0.26
ATG4D-208ENST00000588667 FAHD2BQ6P2I3 314 aaPredicted RBP16.69■□□□□ 0.26
ATG4D-208ENST00000588667 LINC00596Q86U02 117 aa16.69■□□□□ 0.26
ATG4D-208ENST00000588667 DACT3Q96B18 629 aaPredicted RBP16.69■□□□□ 0.26
ATG4D-208ENST00000588667 FAHD2AQ96GK7 314 aa16.69■□□□□ 0.26
ATG4D-208ENST00000588667 SHARPINQ9H0F6 387 aa16.69■□□□□ 0.26
ATG4D-208ENST00000588667 LOC105371242A0A075B767 164 aa16.68■□□□□ 0.26
ATG4D-208ENST00000588667 IGHV2-70DA0A0C4DH43 119 aa16.68■□□□□ 0.26
ATG4D-208ENST00000588667 MEIS3P1A6NDR6 274 aa16.68■□□□□ 0.26
ATG4D-208ENST00000588667 GPR37O15354 613 aa16.68■□□□□ 0.26
ATG4D-208ENST00000588667 TFF1P04155 84 aa16.68■□□□□ 0.26
ATG4D-208ENST00000588667 SELLP14151 372 aa16.68■□□□□ 0.26
ATG4D-208ENST00000588667 PRDX2P32119 198 aa16.68■□□□□ 0.26
ATG4D-208ENST00000588667 RCVRNP35243 200 aa16.68■□□□□ 0.26
ATG4D-208ENST00000588667 MPV17LQ2QL34 196 aa16.68■□□□□ 0.26
ATG4D-208ENST00000588667 FIP1L1Q6UN15 594 aaKnown RBP16.68■□□□□ 0.26
ATG4D-208ENST00000588667 FAM58AQ8N1B3 248 aa16.68■□□□□ 0.26
ATG4D-208ENST00000588667 NUDCD2Q8WVJ2 157 aa16.68■□□□□ 0.26
ATG4D-208ENST00000588667 ST8SIA4Q92187 359 aa16.68■□□□□ 0.26
ATG4D-208ENST00000588667 OR14J1Q9UGF5 321 aa16.68■□□□□ 0.26
ATG4D-208ENST00000588667 INSIG2Q9Y5U4 225 aa16.68■□□□□ 0.26
ATG4D-208ENST00000588667 JMJD1CQ15652 2540 aa16.68■□□□□ 0.26
ATG4D-208ENST00000588667 C22orf46C9J442 243 aa16.67■□□□□ 0.26
ATG4D-208ENST00000588667 PDCD6O75340 191 aa16.67■□□□□ 0.26
ATG4D-208ENST00000588667 CRLF1O75462 422 aa16.67■□□□□ 0.26
ATG4D-208ENST00000588667 OR7C1O76099 320 aaPredicted RBP16.67■□□□□ 0.26
ATG4D-208ENST00000588667 SPNP16150 400 aa16.67■□□□□ 0.26
ATG4D-208ENST00000588667 PRKACAP17612 351 aa16.67■□□□□ 0.26
ATG4D-208ENST00000588667 CHATP28329 748 aa16.67■□□□□ 0.26
ATG4D-208ENST00000588667 CBX5P45973 191 aa16.67■□□□□ 0.26
ATG4D-208ENST00000588667 TAS2R19P59542 299 aa16.67■□□□□ 0.26
ATG4D-208ENST00000588667 SIGIRRQ6IA17 410 aa16.67■□□□□ 0.26
ATG4D-208ENST00000588667 BTNL3Q6UXE8 466 aa16.67■□□□□ 0.26
ATG4D-208ENST00000588667 C6orf201Q7Z4U5 140 aa16.67■□□□□ 0.26
ATG4D-208ENST00000588667 ZNF561Q8N587 486 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms