RNA–Protein interactions for RNA: ENST00000588617.1

VMP1-208, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 884 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-208ENST00000588617 IMPG1Q17R60 797 aa4.85□□□□□ -1.63
VMP1-208ENST00000588617 ZNF101Q8IZC7 436 aa4.85□□□□□ -1.63
VMP1-208ENST00000588617 OR2K2Q8NGT1 345 aa4.85□□□□□ -1.63
VMP1-208ENST00000588617 OR11L1Q8NGX0 322 aa4.85□□□□□ -1.63
VMP1-208ENST00000588617 C17orf50Q8WW18 174 aa4.85□□□□□ -1.63
VMP1-208ENST00000588617 CYGBQ8WWM9 190 aa4.85□□□□□ -1.63
VMP1-208ENST00000588617 CLDN23Q96B33 292 aa4.85□□□□□ -1.63
VMP1-208ENST00000588617 TESCQ96BS2 214 aa4.85□□□□□ -1.63
VMP1-208ENST00000588617 PPP1R36Q96LQ0 422 aa4.85□□□□□ -1.63
VMP1-208ENST00000588617 RWDD2AQ9UIY3 292 aa4.85□□□□□ -1.63
VMP1-208ENST00000588617 ABCC11Q96J66 1382 aa4.85□□□□□ -1.63
VMP1-208ENST00000588617 SOGA1O94964 1423 aa4.85□□□□□ -1.63
VMP1-208ENST00000588617 CEP164Q9UPV0 1460 aa4.85□□□□□ -1.63
VMP1-208ENST00000588617 DNMBPQ6XZF7 1577 aa4.84□□□□□ -1.63
VMP1-208ENST00000588617 GOLGA3Q08378 1498 aa4.84□□□□□ -1.63
VMP1-208ENST00000588617 PTPRKQ15262 1439 aa4.84□□□□□ -1.63
VMP1-208ENST00000588617 TMEM210A6NLX4 147 aa4.84□□□□□ -1.63
VMP1-208ENST00000588617 GOLGA6L19H0YKK7 550 aa4.84□□□□□ -1.63
VMP1-208ENST00000588617 TGOLN2O43493 480 aa4.84□□□□□ -1.63
VMP1-208ENST00000588617 ATP5HO75947 161 aa4.84□□□□□ -1.63
VMP1-208ENST00000588617 AGTR1P30556 359 aa4.84□□□□□ -1.63
VMP1-208ENST00000588617 TGFBR1P36897 503 aa4.84□□□□□ -1.63
VMP1-208ENST00000588617 MP68P56378 58 aa4.84□□□□□ -1.63
VMP1-208ENST00000588617 CDC20Q12834 499 aa4.84□□□□□ -1.63
VMP1-208ENST00000588617 PTGES3Q15185 160 aaKnown RBP4.84□□□□□ -1.63
VMP1-208ENST00000588617 SPIN4Q56A73 249 aa4.84□□□□□ -1.63
VMP1-208ENST00000588617 LPCAT4Q643R3 524 aa4.84□□□□□ -1.63
VMP1-208ENST00000588617 IGFL2Q6UWQ7 119 aa4.84□□□□□ -1.63
VMP1-208ENST00000588617 LRRN1Q6UXK5 716 aa4.84□□□□□ -1.63
VMP1-208ENST00000588617 FAM19A3Q7Z5A8 133 aa4.84□□□□□ -1.63
VMP1-208ENST00000588617 MARCH3Q86UD3 253 aa4.84□□□□□ -1.63
VMP1-208ENST00000588617 STK40Q8N2I9 435 aa4.84□□□□□ -1.63
VMP1-208ENST00000588617 OR2M3Q8NG83 312 aa4.84□□□□□ -1.63
VMP1-208ENST00000588617 OR52N1Q8NH53 320 aa4.84□□□□□ -1.63
VMP1-208ENST00000588617 SLC37A2Q8TED4 501 aa4.84□□□□□ -1.63
VMP1-208ENST00000588617 TAMM41Q96BW9 452 aa4.84□□□□□ -1.63
VMP1-208ENST00000588617 PACRGQ96M98 296 aaPredicted RBP4.84□□□□□ -1.63
VMP1-208ENST00000588617 DOK1Q99704 481 aa4.84□□□□□ -1.63
VMP1-208ENST00000588617 ANAPC11Q9NYG5 84 aa4.84□□□□□ -1.63
VMP1-208ENST00000588617 GUCA1BQ9UMX6 200 aa4.84□□□□□ -1.63
VMP1-208ENST00000588617 RFNGQ9Y644 331 aa4.84□□□□□ -1.63
VMP1-208ENST00000588617 NUP214P35658 2090 aaPredicted RBP4.84□□□□□ -1.64
VMP1-208ENST00000588617 KIF21BO75037 1637 aa4.83□□□□□ -1.64
VMP1-208ENST00000588617 CLUHO75153 1309 aa4.83□□□□□ -1.64
VMP1-208ENST00000588617 ARL6IP5O75915 188 aa4.83□□□□□ -1.64
VMP1-208ENST00000588617 CALB1P05937 261 aa4.83□□□□□ -1.64
VMP1-208ENST00000588617 CISD3P0C7P0 127 aa4.83□□□□□ -1.64
VMP1-208ENST00000588617 CD79BP40259 229 aa4.83□□□□□ -1.64
VMP1-208ENST00000588617 SULT1A2P50226 295 aa4.83□□□□□ -1.64
VMP1-208ENST00000588617 ZNF83P51522 516 aa4.83□□□□□ -1.64
VMP1-208ENST00000588617 RAB2AP61019 212 aa4.83□□□□□ -1.64
VMP1-208ENST00000588617 GNA13Q14344 377 aa4.83□□□□□ -1.64
VMP1-208ENST00000588617 CENPWQ5EE01 88 aa4.83□□□□□ -1.64
VMP1-208ENST00000588617 SAPCD1Q5SSQ6 148 aa4.83□□□□□ -1.64
VMP1-208ENST00000588617 ZNF678Q5SXM1 525 aa4.83□□□□□ -1.64
VMP1-208ENST00000588617 FAM222AQ5U5X8 452 aa4.83□□□□□ -1.64
VMP1-208ENST00000588617 ELP2Q6IA86 826 aa4.83□□□□□ -1.64
VMP1-208ENST00000588617 ASB13Q8WXK3 278 aa4.83□□□□□ -1.64
VMP1-208ENST00000588617 MROQ9BYG7 248 aa4.83□□□□□ -1.64
VMP1-208ENST00000588617 MAP1LC3AQ9H492 121 aa4.83□□□□□ -1.64
VMP1-208ENST00000588617 ZSCAN16Q9H4T2 348 aaPredicted RBP4.83□□□□□ -1.64
VMP1-208ENST00000588617 TMEM38BQ9NVV0 291 aa4.83□□□□□ -1.64
VMP1-208ENST00000588617 NYAP2Q9P242 653 aa4.83□□□□□ -1.64
VMP1-208ENST00000588617 ERICH3Q5RHP9 1530 aa4.82□□□□□ -1.64
VMP1-208ENST00000588617 ANKRD12Q6UB98 2062 aa4.82□□□□□ -1.64
VMP1-208ENST00000588617 PRXQ9BXM0 1461 aa4.82□□□□□ -1.64
VMP1-208ENST00000588617 C9orf84Q5VXU9 1444 aa4.82□□□□□ -1.64
VMP1-208ENST00000588617 M0R036 132 aa4.82□□□□□ -1.64
VMP1-208ENST00000588617 OR7C2O60412 319 aa4.82□□□□□ -1.64
VMP1-208ENST00000588617 LYPLA2O95372 231 aa4.82□□□□□ -1.64
VMP1-208ENST00000588617 GTF2F2P13984 249 aa4.82□□□□□ -1.64
VMP1-208ENST00000588617 RPS12P25398 132 aaKnown RBP4.82□□□□□ -1.64
VMP1-208ENST00000588617 STX5Q13190 355 aa4.82□□□□□ -1.64
VMP1-208ENST00000588617 SP6Q3SY56 376 aa4.82□□□□□ -1.64
VMP1-208ENST00000588617 OR5D18Q8NGL1 313 aa4.82□□□□□ -1.64
VMP1-208ENST00000588617 C2orf15Q8WU43 125 aaKnown RBP4.82□□□□□ -1.64
VMP1-208ENST00000588617 RAB8BQ92930 207 aa4.82□□□□□ -1.64
VMP1-208ENST00000588617 TIPINQ9BVW5 301 aa4.82□□□□□ -1.64
VMP1-208ENST00000588617 TAS2R9Q9NYW1 312 aa4.82□□□□□ -1.64
VMP1-208ENST00000588617 GLS2Q9UI32 602 aa4.82□□□□□ -1.64
VMP1-208ENST00000588617 ATRXP46100 2492 aa4.82□□□□□ -1.64
VMP1-208ENST00000588617 ABCA10Q8WWZ4 1543 aa4.82□□□□□ -1.64
VMP1-208ENST00000588617 TOPBP1Q92547 1522 aa4.82□□□□□ -1.64
VMP1-208ENST00000588617 DOCK8Q8NF50 2099 aa4.81□□□□□ -1.64
VMP1-208ENST00000588617 IGLV3-16A0A075B6K0 115 aa4.81□□□□□ -1.64
VMP1-208ENST00000588617 K7EPK0 472 aa4.81□□□□□ -1.64
VMP1-208ENST00000588617 M0QYV0 167 aa4.81□□□□□ -1.64
VMP1-208ENST00000588617 ISG15P05161 165 aa4.81□□□□□ -1.64
VMP1-208ENST00000588617 HOXA6P31267 233 aa4.81□□□□□ -1.64
VMP1-208ENST00000588617 BCL2A1Q16548 175 aa4.81□□□□□ -1.64
VMP1-208ENST00000588617 CD200R1LQ6Q8B3 271 aa4.81□□□□□ -1.64
VMP1-208ENST00000588617 HS3ST5Q8IZT8 346 aa4.81□□□□□ -1.64
VMP1-208ENST00000588617 CCDC112Q8NEF3 446 aa4.81□□□□□ -1.64
VMP1-208ENST00000588617 OR8A1Q8NGG7 326 aa4.81□□□□□ -1.64
VMP1-208ENST00000588617 HAVCR2Q8TDQ0 301 aa4.81□□□□□ -1.64
VMP1-208ENST00000588617 ESR2Q92731 530 aa4.81□□□□□ -1.64
VMP1-208ENST00000588617 CCDC94Q9BW85 323 aaPredicted RBP4.81□□□□□ -1.64
VMP1-208ENST00000588617 DNMT1P26358 1616 aaKnown RBP4.8□□□□□ -1.64
VMP1-208ENST00000588617 BTNL10A8MVZ5 291 aa4.8□□□□□ -1.64
VMP1-208ENST00000588617 TMEM250H0YL14 139 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms